Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17761 Vaccinium macrocarpon HOM05D005752 ORTHO05D006959 4.9e-81 304.7 183 100.0
MELO3C001966.2 Cucumis melo HOM05D005752 ORTHO05D006959 3.1e-35 152.5 209 49.3
vmacro17785 Vaccinium macrocarpon HOM05D005752 ORTHO05D006959 2.7e-31 139.4 78 87.2
Rhsim08G0128600 Rhododendron simsii HOM05D005752 ORTHO05D006959 5.6e-29 131.7 189 48.7
ClCG04G012440 Citrullus lanatus HOM05D005752 ORTHO05D006959 8.4e-25 117.9 182 44.5
Lj5C168T8 Lonicera japonica HOM05D005752 ORTHO05D006959 1.1e-24 117.5 179 44.7
HanXRQChr04g0126291 Helianthus annuus HOM05D005752 ORTHO05D006959 1.4e-24 117.1 183 43.7
Oeu038392.3 Olea europaea HOM05D005752 ORTHO05D006959 2.4e-24 116.3 180 43.3
AUR62041602 Chenopodium quinoa HOM05D005752 ORTHO05D006959 4.2e-24 115.5 183 43.7
CDE04G3451 Ceratophyllum demersum HOM05D005752 ORTHO05D006959 9.3e-24 114.4 181 44.2
Ciclev10024397m.g Citrus clementina HOM05D005752 ORTHO05D006959 9.3e-24 114.4 182 42.9
VMungo0464G0712 Vigna mungo HOM05D005752 ORTHO05D006959 9.3e-24 114.4 181 43.6
RcHm_v2.0_Chr7g0218081 Rosa chinensis HOM05D005752 ORTHO05D006959 1.2e-23 114.0 180 42.2
arahy.Tifrunner.gnm1.ann1.LY2Y4A Arachis hypogaea HOM05D005752 ORTHO05D006959 1.6e-23 113.6 181 42.5
AUR62040639 Chenopodium quinoa HOM05D005752 ORTHO05D006959 1.6e-23 113.6 182 41.8
FAN18G3658 Fragaria x ananassa HOM05D005752 ORTHO05D006959 1.6e-23 113.6 179 43.0
CSS0040154 Camellia sinensis var. sinensis HOM05D005752 ORTHO05D006959 2.1e-23 113.2 176 44.3
CsaV3_1G005270 Cucumis sativus L. HOM05D005752 ORTHO05D006959 2.1e-23 113.2 182 42.3
arahy.Tifrunner.gnm1.ann1.CL4QH0 Arachis hypogaea HOM05D005752 ORTHO05D006959 2.7e-23 112.8 180 42.8
FAN08G2690 Fragaria x ananassa HOM05D005752 ORTHO05D006959 3.5e-23 112.5 179 42.5
Hund06741 Selenicereus undatus HOM05D005752 ORTHO05D006959 3.5e-23 112.5 179 43.0
EL10Ac8g19469 Beta vulgaris HOM05D005752 ORTHO05D006959 4.6e-23 112.1 179 42.5
Cfa017810 Carpinus fangiana HOM05D005752 ORTHO05D006959 6.0e-23 111.7 181 41.4
Sc10g0008680 Simmondsia chinensis HOM05D005752 ORTHO05D006959 6.0e-23 111.7 181 42.0
Lalb_Chr14g0370131 Lupinus albus HOM05D005752 ORTHO05D006959 7.9e-23 111.3 179 42.5
HPP92_021122 Vanilla planifolia HOM05D005752 ORTHO05D006959 7.9e-23 111.3 179 42.5
Actinidia06837 Actinidia chinensis HOM05D005752 ORTHO05D006959 1.0e-22 110.9 176 43.8
ATR0124G026 Amborella trichopoda HOM05D005752 ORTHO05D006959 1.8e-22 110.2 179 42.5
Cc00_g01570 Coffea canephora HOM05D005752 ORTHO05D006959 1.8e-22 110.2 183 42.1
Nn4g25057 Nelumbo nucifera HOM05D005752 ORTHO05D006959 1.8e-22 110.2 178 43.3
CAN.G65.61 Capsicum annuum HOM05D005752 ORTHO05D006959 3.0e-22 109.4 179 41.3
Migut.O00287 Erythranthe guttata HOM05D005752 ORTHO05D006959 3.9e-22 109.0 176 42.6
THA.LOC104812187 Tarenaya hassleriana HOM05D005752 ORTHO05D006959 3.9e-22 109.0 176 42.0
CANSAT80G0630 Cannabis sativa HOM05D005752 ORTHO05D006959 5.1e-22 108.6 176 41.5
Manes.15G187700 Manihot esculenta HOM05D005752 ORTHO05D006959 5.1e-22 108.6 176 42.6
FvH4_5g27080 Fragaria vesca HOM05D005752 ORTHO05D006959 6.7e-22 108.2 176 42.0
PGSC0003DMG400015277 Solanum tuberosum HOM05D005752 ORTHO05D006959 6.7e-22 108.2 182 41.8
Atru.chr9.27 Acer truncatum HOM05D005752 ORTHO05D006959 8.7e-22 107.8 176 42.0
ECA232G1540 Erigeron canadensis HOM05D005752 ORTHO05D006959 8.7e-22 107.8 176 42.0
Nitab4.5_0000477g0100 Nicotiana tabacum HOM05D005752 ORTHO05D006959 1.1e-21 107.5 182 42.3
Zm00001eb185640 Zea mays HOM05D005752 ORTHO05D006959 1.1e-21 107.5 176 42.0
Eucgr.H00664 Eucalyptus grandis HOM05D005752 ORTHO05D006959 1.5e-21 107.1 176 42.0
Glyma.09G161000 Glycine max HOM05D005752 ORTHO05D006959 1.5e-21 107.1 176 42.0
Glyma.16G210400 Glycine max HOM05D005752 ORTHO05D006959 1.5e-21 107.1 176 42.0
Os02g0637900 Oryza sativa ssp. japonica HOM05D005752 ORTHO05D006959 1.5e-21 107.1 176 42.0
PSO063G6484 Papaver somniferum HOM05D005752 ORTHO05D006959 1.5e-21 107.1 176 41.5
PSO782G4127 Papaver somniferum HOM05D005752 ORTHO05D006959 1.5e-21 107.1 176 41.5
Lj2g0008613 Lotus japonicus HOM05D005752 ORTHO05D006959 1.9e-21 106.7 176 41.5
Prupe.1G588300 Prunus persica HOM05D005752 ORTHO05D006959 1.9e-21 106.7 176 41.5
Aqoxy3G04339 Aquilegia oxysepala HOM05D005752 ORTHO05D006959 3.3e-21 105.9 176 41.5
CDE08G1652 Ceratophyllum demersum HOM05D005752 ORTHO05D006959 4.3e-21 105.5 177 42.4
Sed0024837 Sechium edule HOM05D005752 ORTHO05D006959 4.3e-21 105.5 176 40.9
TWI81G0144 Tripterygium wilfordii HOM05D005752 ORTHO05D006959 4.3e-21 105.5 176 41.5
CiPaw.15G108100 Carya illinoinensis HOM05D005752 ORTHO05D006959 5.6e-21 105.1 176 41.5
PGR083G1308 Punica granatum HOM05D005752 ORTHO05D006959 5.6e-21 105.1 176 40.9
TAR472G0004 Trochodendron aralioides HOM05D005752 ORTHO05D006959 7.4e-21 104.8 176 40.9
Duzib205G1872 Durio zibethinus HOM05D005752 ORTHO05D006959 9.6e-21 104.4 176 40.9
BcaB03g15707 Brassica carinata HOM05D005752 ORTHO05D006959 1.3e-20 104.0 179 41.3
BolC6t38521H Brassica oleracea HOM05D005752 ORTHO05D006959 1.6e-20 103.6 181 40.9
QL10p031508 Quercus lobata HOM05D005752 ORTHO05D006959 1.6e-20 103.6 81 72.8
Gohir.A07G062900 Gossypium hirsutum HOM05D005752 ORTHO05D006959 2.1e-20 103.2 176 40.3
Gohir.D07G067500 Gossypium hirsutum HOM05D005752 ORTHO05D006959 2.1e-20 103.2 176 40.3
Gorai.001G071100 Gossypium raimondii HOM05D005752 ORTHO05D006959 2.1e-20 103.2 176 40.3
BcaC08g45648 Brassica carinata HOM05D005752 ORTHO05D006959 2.8e-20 102.8 179 40.8
BraA07t30622Z Brassica rapa HOM05D005752 ORTHO05D006959 2.8e-20 102.8 179 40.8
Medtr6g068990 Medicago truncatula HOM05D005752 ORTHO05D006959 3.7e-20 102.4 84 66.7
COL.COLO4_38544 Corchorus olitorius HOM05D005752 ORTHO05D006959 4.8e-20 102.1 179 43.6
SEGI_37918 Sequoiadendron giganteum HOM05D005752 ORTHO05D006959 4.8e-20 102.1 176 39.8
DCAR_023237 Daucus carota HOM05D005752 ORTHO05D006959 6.2e-20 101.7 179 41.3
TAR636G2449 Trochodendron aralioides HOM05D005752 ORTHO05D006959 8.2e-20 101.3 178 40.4
BcaB03g15052 Brassica carinata HOM05D005752 ORTHO05D006959 1.1e-19 100.9 179 40.2
Carub.0002s2009 Capsella rubella HOM05D005752 ORTHO05D006959 5.3e-19 98.6 176 40.9
Sabra04G0044500 Salix brachista HOM05D005752 ORTHO05D006959 9.0e-19 97.8 183 41.5
AT1G73350 Arabidopsis thaliana HOM05D005752 ORTHO05D006959 1.2e-18 97.4 176 40.3
BraA07t31481Z Brassica rapa HOM05D005752 ORTHO05D006959 3.4e-18 95.9 184 38.6
Potri.004G066700 Populus trichocarpa HOM05D005752 ORTHO05D006959 1.3e-17 94.0 179 41.3
Sp5g28280 Schrenkiella parvula HOM05D005752 ORTHO05D006959 1.7e-17 93.6 174 39.1
A07p39320 Brassica napus HOM05D005752 ORTHO05D006959 4.9e-17 92.0 184 37.5
Nitab4.5_0008182g0060 Nicotiana tabacum HOM05D005752 ORTHO05D006959 1.4e-16 90.5 169 38.5
Nitab4.5_0005315g0030 Nicotiana tabacum HOM05D005752 ORTHO05D006959 1.9e-16 90.1 170 39.4
Pp3c16_8600 Physcomitrium patens HOM05D005752 ORTHO05D006959 1.9e-16 90.1 177 37.3
Pp3c25_5680 Physcomitrium patens HOM05D005752 ORTHO05D006959 1.9e-16 90.1 177 37.3
Nitab4.5_0009307g0030 Nicotiana tabacum HOM05D005752 ORTHO05D006959 2.5e-16 89.7 169 37.9
unitig_0.g1238 Utricularia gibba HOM05D000376 ORTHO05D000237 3.2e-16 89.4 168 38.7
A07p29840 Brassica napus HOM05D005752 ORTHO05D006959 5.5e-16 88.6 205 35.6
Lsat_1_v5_gn_6_23301 Lactuca sativa HOM05D005752 ORTHO05D006959 9.3e-16 87.8 164 39.0
SalBow5G5648 Salvia bowleyana HOM05D005752 ORTHO05D006959 1.8e-14 83.6 161 38.5
QL12p037498 Quercus lobata HOM05D005752 ORTHO05D006959 3.0e-14 82.8 136 42.6
Ca_25284_v3 Cicer arietinum L. HOM05D005752 ORTHO05D006959 8.7e-14 81.3 40 92.5
MD06G1000100 Malus domestica HOM05D005752 ORTHO05D006959 1.5e-13 80.5 44 86.4
MBI03_g11902_MAGBIO Magnolia biondii HOM05D005752 ORTHO05D006959 3.3e-13 79.3 40 92.5
GSVIVG01024241001 Vitis vinifera HOM05D005752 ORTHO05D006959 3.3e-13 79.3 40 92.5
QL10p035764 Quercus lobata HOM05D005752 ORTHO05D006959 1.3e-12 77.4 136 39.7
Sopen03g029760 Solanum pennellii HOM05D005752 ORTHO05D006959 1.1e-11 74.3 42 90.5
GSVIVG01024240001 Vitis vinifera HOM05D005752 ORTHO05D006959 1.1e-11 74.3 39 97.4
Aa31LG4G3620 Aethionema arabicum HOM05D005752 ORTHO05D006959 2.4e-11 73.2 44 81.8
AL2G33130 Arabidopsis lyrata HOM05D005752 ORTHO05D006959 2.4e-11 73.2 41 87.8
Ah.14g085830 Amaranthus hybridus HOM05D005752 ORTHO05D006959 4.1e-11 72.4 39 94.9
PGSC0003DMG400026968 Solanum tuberosum HOM05D005752 ORTHO05D006959 4.1e-11 72.4 39 94.9
Thhalv10019162m.g Eutrema salsugineum HOM05D005752 ORTHO05D006959 5.3e-11 72.0 161 35.4
Eucgr.G00948 Eucalyptus grandis HOM05D005752 ORTHO05D006959 2.6e-10 69.7 39 92.3
AL2G33120 Arabidopsis lyrata HOM05D005752 ORTHO05D006959 4.5e-10 68.9 36 97.2
CARHR066400 Cardamine hirsuta HOM05D005752 ORTHO05D006959 4.5e-10 68.9 36 97.2
Dinv04371 Davidia involucrata HOM05D005752 ORTHO05D006959 4.5e-10 68.9 36 97.2
Phvul.004G136400 Phaseolus vulgaris HOM05D005752 ORTHO05D006959 4.5e-10 68.9 36 97.2
Thecc.03G073300 Theobroma cacao HOM05D005752 ORTHO05D006959 4.5e-10 68.9 36 97.2
C06p34060 Brassica napus HOM05D005752 ORTHO05D006959 1.0e-09 67.8 36 94.4
SGA_v2.0_scaffold21G09651 Striga asiatica HOM05D005752 ORTHO05D006959 1.3e-09 67.4 40 80.0
Mapoly0033s0045 Marchantia polymorpha HOM05D005752 ORTHO05D006959 2.2e-09 66.6 36 94.4
MSTRG.23218 Avicennia marina HOM05D005752 ORTHO05D006959 2.9e-09 66.2 36 94.4
Eucgr.J01173 Eucalyptus grandis HOM05D005752 ORTHO05D006959 5.0e-09 65.5 36 94.4
PGSC0003DMG400035697 Solanum tuberosum HOM05D005752 ORTHO05D006959 4.2e-08 62.4 46 73.9
AagrBONN_evm.TU.Sc2ySwM_368.1654 Anthoceros agrestis HOM05D005752 ORTHO05D006959 2.1e-07 60.1 44 70.5
CBR_g54189 Chara braunii HOM05D005752 ORTHO05D006959 1.4e-06 57.4 58 56.9
SMO232G0035 Selaginella moellendorffii HOM05D005752 ORTHO05D006959 1.4e-06 57.4 184 29.3
CAN.G861.19 Capsicum annuum HOM05D005752 ORTHO05D006959 3.9e-06 55.8 29 96.6
BcaC08g46759 Brassica carinata HOM05D005752 ORTHO05D006959 6.7e-06 55.1 53 54.7


User provided reference genes

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