Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 7.2e-239 830.1 398 100.0
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 1.1e-173 613.6 350 85.7
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 4.1e-157 558.5 351 76.6
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 5.9e-156 554.7 381 70.1
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 1.2e-148 530.4 350 72.9
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 1.9e-146 523.1 353 70.8
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 4.2e-146 521.9 351 72.4
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 1.2e-145 520.4 350 68.9
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 1.6e-145 520.0 350 68.9
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 3.6e-145 518.8 350 68.6
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 1.8e-144 516.5 350 69.1
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 8.8e-144 514.2 346 68.8
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 7.4e-143 511.1 350 69.7
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 2.2e-142 509.6 381 64.6
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 4.8e-142 508.4 350 68.0
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 1.4e-141 506.9 350 67.7
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 5.9e-140 501.5 351 66.7
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 8.5e-139 497.7 350 66.0
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 3.2e-138 495.7 350 67.4
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 4.2e-138 495.4 351 68.1
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 3.6e-137 492.3 350 67.1
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 6.1e-137 491.5 350 66.0
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 2.3e-136 489.6 350 64.9
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 5.2e-136 488.4 351 65.2
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 5.2e-136 488.4 355 65.4
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 6.7e-136 488.0 350 65.7
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 8.8e-136 487.6 354 64.7
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 1.1e-135 487.3 386 62.7
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 1.3e-134 483.8 350 65.7
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 3.7e-134 482.3 353 65.7
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 3.7e-134 482.3 351 65.0
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 8.2e-134 481.1 353 65.7
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 1.1e-133 480.7 366 65.6
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 1.4e-133 480.3 352 64.5
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 1.8e-133 479.9 349 64.8
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 5.3e-133 478.4 357 63.6
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 5.3e-133 478.4 357 63.6
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 1.2e-132 477.2 352 64.2
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 1.6e-132 476.9 351 64.4
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 3.5e-132 475.7 352 64.2
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 4.5e-132 475.3 348 65.8
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 1.7e-131 473.4 371 62.5
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 8.5e-131 471.1 356 64.6
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 1.5e-130 470.3 351 64.7
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.5e-130 470.3 288 77.8
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 1.5e-130 470.3 352 63.4
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 4.2e-130 468.8 352 61.9
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 5.5e-130 468.4 352 63.1
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 7.2e-130 468.0 377 59.7
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 1.2e-129 467.2 348 64.4
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 2.1e-129 466.5 351 63.0
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 1.0e-128 464.2 351 63.2
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 1.4e-128 463.8 353 64.3
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 5.2e-128 461.8 337 65.0
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 5.2e-128 461.8 354 61.6
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 6.8e-128 461.5 396 57.8
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 2.0e-127 459.9 379 59.1
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 2.0e-127 459.9 364 59.6
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 3.4e-127 459.1 353 62.9
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 2.4e-125 453.0 352 59.9
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 4.1e-125 452.2 411 55.0
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 5.3e-125 451.8 357 59.4
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 1.6e-124 450.3 352 59.9
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 1.0e-123 447.6 352 59.7
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 1.0e-123 447.6 353 59.5
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 1.7e-123 446.8 352 59.7
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 2.2e-123 446.4 352 59.4
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 5.0e-123 445.3 352 59.4
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 8.5e-123 444.5 352 58.8
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 3.2e-122 442.6 352 58.2
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 3.2e-122 442.6 352 58.8
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 5.5e-122 441.8 350 61.4
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 2.1e-121 439.9 343 58.6
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 3.6e-121 439.1 317 65.9
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 6.1e-121 438.3 352 58.0
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 6.1e-121 438.3 343 61.8
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 5.7e-119 431.8 343 61.8
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 2.2e-118 429.9 353 59.2
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 7.0e-117 424.9 351 59.0
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 5.9e-116 421.8 341 59.5
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 1.7e-115 420.2 353 56.4
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 7.2e-114 414.8 352 58.5
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 1.0e-107 394.4 379 52.5
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 1.3e-107 394.0 303 60.7
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 2.3e-104 383.3 299 64.5
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 4.0e-104 382.5 254 72.8
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 3.4e-103 379.4 258 67.8
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 3.3e-98 362.8 279 64.2
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 3.2e-93 346.3 251 68.1
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 1.6e-89 334.0 213 70.4
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 2.8e-89 333.2 251 64.1
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 4.7e-89 332.4 351 50.7
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 1.2e-81 307.8 264 54.9
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 7.6e-79 298.5 261 60.9
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 1.3e-75 287.7 211 64.5
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 3.1e-72 276.6 311 44.4
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 1.1e-69 268.1 318 44.3
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 4.6e-68 262.7 357 44.8
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 2.5e-66 256.9 312 43.9
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 3.6e-65 253.1 309 40.5
Lsat_1_v5_gn_2_78040 Lactuca sativa HOM05D006805 ORTHO05D008656 1.3e-62 244.6 221 56.1
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 1.7e-62 244.2 312 42.3
HanXRQChr12g0370271 Helianthus annuus HOM05D006805 ORTHO05D008656 1.3e-57 228.0 212 54.2
Dinv10224 Davidia involucrata HOM05D006805 ORTHO05D008656 3.0e-51 206.8 137 70.8
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 1.8e-48 197.6 350 36.6
HanXRQChr09g0256121 Helianthus annuus HOM05D006805 ORTHO05D008656 1.4e-45 188.0 295 40.7
TPR.G21539 Trifolium pratense HOM05D000894 ORTHO05D001833 7.9e-44 182.2 129 65.1
Glyma.16G133100 Glycine max HOM05D006805 ORTHO05D008656 1.8e-43 181.0 119 68.9
TPR.G21535 Trifolium pratense HOM05D006805 ORTHO05D008656 2.3e-43 180.6 162 53.7
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 9.4e-37 158.7 149 53.0
Glyma.10G129950 Glycine max HOM05D006805 ORTHO05D008656 5.7e-34 149.4 107 64.5
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 1.4e-32 144.8 298 31.2
AL6G38800 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 8.5e-30 135.6 153 46.4
Lj2g0002148 Lotus japonicus HOM05D006805 ORTHO05D008656 5.1e-27 126.3 102 58.8
EL10Ac7g17413 Beta vulgaris HOM05D006805 ORTHO05D008656 9.7e-26 122.1 102 53.9
MD02G1139100 Malus domestica HOM05D006805 ORTHO05D008656 2.4e-24 117.5 92 62.0
RcHm_v2.0_Chr2g0136281 Rosa chinensis HOM05D006805 ORTHO05D008656 4.8e-09 66.6 41 73.2
Aa31LG6G13240 Aethionema arabicum HOM05D006805 ORTHO05D008656 1.7e-06 58.2 67 49.3


User provided reference genes

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