Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17633 Vaccinium macrocarpon HOM05D000186 ORTHO05D002091 1.3e-66 256.1 120 100.0
Actinidia10446 Actinidia chinensis HOM05D000186 ORTHO05D002091 4.1e-20 101.7 61 75.4
Actinidia04801 Actinidia chinensis HOM05D000186 ORTHO05D002091 1.6e-19 99.8 52 84.6
Oeu044772.1 Olea europaea HOM05D000186 ORTHO05D002091 8.5e-18 94.0 79 54.4
SGA_v2.0_scaffold313G48288 Striga asiatica HOM05D000186 ORTHO05D002091 5.5e-17 91.3 79 53.2
CSS0019649 Camellia sinensis var. sinensis HOM05D000186 ORTHO05D002091 1.6e-16 89.7 52 73.1
CSS0027685 Camellia sinensis var. sinensis HOM05D000186 ORTHO05D002091 1.6e-16 89.7 52 73.1
Hma1.2p1_0060F.1_g032760 Hydrangea macrophylla HOM05D000186 ORTHO05D002091 1.6e-16 89.7 79 57.0
Oeu014426.1 Olea europaea HOM05D000186 ORTHO05D002091 8.0e-16 87.4 53 71.7
Prupe.5G208900 Prunus persica HOM05D000186 ORTHO05D002091 1.4e-15 86.7 70 60.0
Atru.chr9.480 Acer truncatum HOM05D000186 ORTHO05D002091 1.8e-15 86.3 52 75.0
GSVIVG01008143001 Vitis vinifera HOM05D000186 ORTHO05D002091 1.8e-15 86.3 70 60.0
arahy.Tifrunner.gnm1.ann1.11TW0N Arachis hypogaea HOM05D000186 ORTHO05D002091 2.3e-15 85.9 79 53.2
arahy.Tifrunner.gnm1.ann1.WQLB21 Arachis hypogaea HOM05D000186 ORTHO05D002091 2.3e-15 85.9 79 53.2
Cc04_g16260 Coffea canephora HOM05D000186 ORTHO05D002091 3.0e-15 85.5 80 52.5
Dinv17455 Davidia involucrata HOM05D000186 ORTHO05D002091 3.0e-15 85.5 79 54.4
CAN.G1592.7 Capsicum annuum HOM05D000186 ORTHO05D002091 4.0e-15 85.1 49 69.4
Dinv31060 Davidia involucrata HOM05D000186 ORTHO05D002091 5.2e-15 84.7 79 54.4
QL10p020421 Quercus lobata HOM05D000186 ORTHO05D002091 5.2e-15 84.7 70 60.0
ClCG06G015460 Citrullus lanatus HOM05D000186 ORTHO05D002091 1.2e-14 83.6 65 58.5
MELO3C017247.2 Cucumis melo HOM05D000186 ORTHO05D002091 1.2e-14 83.6 52 69.2
CsaV3_1G003360 Cucumis sativus L. HOM05D000186 ORTHO05D002091 1.2e-14 83.6 52 69.2
MD06G1204900 Malus domestica HOM05D000186 ORTHO05D002091 1.2e-14 83.6 70 58.6
Aqoxy3G03728 Aquilegia oxysepala HOM05D000186 ORTHO05D002091 2.0e-14 82.8 79 50.6
Nitab4.5_0002467g0040 Nicotiana tabacum HOM05D000186 ORTHO05D002091 2.0e-14 82.8 52 69.2
Peaxi162Scf00365g00112 Petunia axillaris HOM05D000186 ORTHO05D002091 2.0e-14 82.8 52 65.4
RcHm_v2.0_Chr7g0183671 Rosa chinensis HOM05D000186 ORTHO05D002091 3.4e-14 82.0 71 57.7
CANSAT80G1204 Cannabis sativa HOM05D000186 ORTHO05D002091 4.4e-14 81.6 52 75.0
Haze_07760 Corylus avellana HOM05D000186 ORTHO05D002091 4.4e-14 81.6 52 73.1
Lsat_1_v5_gn_4_114580 Lactuca sativa HOM05D000186 ORTHO05D002091 4.4e-14 81.6 79 49.4
MD14G1216000 Malus domestica HOM05D000186 ORTHO05D002091 4.4e-14 81.6 70 57.1
Lj5A136T88 Lonicera japonica HOM05D000186 ORTHO05D002091 5.7e-14 81.3 54 70.4
PSO063G5889 Papaver somniferum HOM05D000186 ORTHO05D002091 5.7e-14 81.3 79 49.4
Eucgr.B00636 Eucalyptus grandis HOM05D000186 ORTHO05D002091 7.5e-14 80.9 60 66.7
Cfa019368 Carpinus fangiana HOM05D000186 ORTHO05D002091 9.8e-14 80.5 70 55.7
CiPaw.11G056600 Carya illinoinensis HOM05D000186 ORTHO05D002091 9.8e-14 80.5 52 73.1
FvH4_5g13450 Fragaria vesca HOM05D000186 ORTHO05D002091 1.3e-13 80.1 53 71.7
FAN18G0286 Fragaria x ananassa HOM05D000186 ORTHO05D002091 1.3e-13 80.1 53 71.7
Lj9A438T57 Lonicera japonica HOM05D000186 ORTHO05D002091 2.8e-13 79.0 54 70.4
PSO782G3479 Papaver somniferum HOM05D000186 ORTHO05D002091 2.8e-13 79.0 79 48.1
Thecc.03G107200 Theobroma cacao HOM05D000186 ORTHO05D002091 3.7e-13 78.6 79 51.9
TAR629G1706 Trochodendron aralioides HOM05D000186 ORTHO05D002091 3.7e-13 78.6 57 61.4
FAN08G1672 Fragaria x ananassa HOM05D000186 ORTHO05D002091 6.3e-13 77.8 53 69.8
FAN13G1276 Fragaria x ananassa HOM05D000186 ORTHO05D002091 6.3e-13 77.8 53 69.8
Ciclev10019659m.g Citrus clementina HOM05D000186 ORTHO05D002091 8.3e-13 77.4 54 66.7
Sed0015454 Sechium edule HOM05D000186 ORTHO05D002091 8.3e-13 77.4 65 55.4
Sed0027692 Sechium edule HOM05D000186 ORTHO05D002091 1.4e-12 76.6 65 55.4
Duzib084G0508 Durio zibethinus HOM05D000186 ORTHO05D002091 1.8e-12 76.3 51 74.5
Duzib205G1125 Durio zibethinus HOM05D000186 ORTHO05D002091 1.8e-12 76.3 79 51.9
MSTRG.9584 Avicennia marina HOM05D000186 ORTHO05D002091 2.4e-12 75.9 79 44.3
Duzib068G1110 Durio zibethinus HOM05D000186 ORTHO05D002091 2.4e-12 75.9 79 51.9
Potri.015G060800 Populus trichocarpa HOM05D000186 ORTHO05D002091 2.4e-12 75.9 54 64.8
Gohir.A11G033800 Gossypium hirsutum HOM05D000186 ORTHO05D002091 3.1e-12 75.5 70 57.1
Gohir.D11G037200 Gossypium hirsutum HOM05D000186 ORTHO05D002091 3.1e-12 75.5 70 57.1
Gorai.007G040000 Gossypium raimondii HOM05D000186 ORTHO05D002091 3.1e-12 75.5 70 57.1
Migut.D01619 Erythranthe guttata HOM05D000186 ORTHO05D002091 4.1e-12 75.1 52 63.5
Potri.012G064500 Populus trichocarpa HOM05D000186 ORTHO05D002091 4.1e-12 75.1 54 64.8
MSTRG.4493 Avicennia marina HOM05D000186 ORTHO05D002091 5.4e-12 74.7 52 61.5
CSS0033936 Camellia sinensis var. sinensis HOM05D000186 ORTHO05D002091 5.4e-12 74.7 52 65.4
Lj1g0013004 Lotus japonicus HOM05D000186 ORTHO05D002091 9.1e-12 73.9 70 52.9
Nn3g17523 Nelumbo nucifera HOM05D000186 ORTHO05D002091 1.2e-11 73.6 55 63.6
Sabra12G0045600 Salix brachista HOM05D000186 ORTHO05D002091 1.6e-11 73.2 56 62.5
COL.COLO4_34347 Corchorus olitorius HOM05D000186 ORTHO05D002091 2.0e-11 72.8 54 66.7
TWI15G0251 Tripterygium wilfordii HOM05D000186 ORTHO05D002091 3.5e-11 72.0 76 46.1
Glyma.04G159200 Glycine max HOM05D000186 ORTHO05D002091 4.5e-11 71.6 52 61.5
Nn4g23525 Nelumbo nucifera HOM05D000186 ORTHO05D002091 4.5e-11 71.6 79 50.6
Lsat_1_v5_gn_1_15261 Lactuca sativa HOM05D000186 ORTHO05D002091 7.7e-11 70.9 52 61.5
Glyma.17G081400 Glycine max HOM05D000186 ORTHO05D002091 1.0e-10 70.5 70 42.9
TAR126G0003 Trochodendron aralioides HOM05D000186 ORTHO05D002091 2.3e-10 69.3 70 50.0
Glyma.06G205900 Glycine max HOM05D000186 ORTHO05D002091 3.8e-10 68.6 61 52.5
Sabra15G0086000 Salix brachista HOM05D000186 ORTHO05D002091 3.8e-10 68.6 54 61.1
Sopen03g033890 Solanum pennellii HOM05D000186 ORTHO05D002091 5.0e-10 68.2 79 39.2
Lj4g0019642 Lotus japonicus HOM05D000186 ORTHO05D002091 6.6e-10 67.8 70 48.6
Manes.14G088700 Manihot esculenta HOM05D000186 ORTHO05D002091 1.1e-09 67.0 59 52.5
PGSC0003DMG400024623 Solanum tuberosum HOM05D000186 ORTHO05D002091 1.1e-09 67.0 79 39.2
Hund02545 Selenicereus undatus HOM05D000186 ORTHO05D002091 1.9e-09 66.2 62 54.8
Solyc03g114810.3 Solanum lycopersicum HOM05D000186 ORTHO05D002091 1.9e-09 66.2 79 38.0
Aa31LG7G3340 Aethionema arabicum HOM05D000186 ORTHO05D002091 2.5e-09 65.9 58 53.4
SHI17430 Sapria himalayana HOM05D000186 ORTHO05D002091 2.5e-09 65.9 44 68.2
PGR044G1165 Punica granatum HOM05D000186 ORTHO05D002091 3.3e-09 65.5 72 54.2
HanXRQChr09g0270291 Helianthus annuus HOM05D000186 ORTHO05D002091 4.2e-09 65.1 55 54.5
CARHR019200 Cardamine hirsuta HOM05D000186 ORTHO05D002091 1.2e-08 63.5 64 50.0
TWI81G0922 Tripterygium wilfordii HOM05D000186 ORTHO05D002091 1.2e-08 63.5 77 45.5
Phvul.009G203500 Phaseolus vulgaris HOM05D000186 ORTHO05D002091 1.6e-08 63.2 52 57.7
ECA247G3027 Erigeron canadensis HOM05D000186 ORTHO05D002091 2.8e-08 62.4 64 46.9
Thhalv10007318m.g Eutrema salsugineum HOM05D000186 ORTHO05D002091 2.8e-08 62.4 64 50.0
Ca_21758_v3 Cicer arietinum L. HOM05D000186 ORTHO05D002091 8.0e-08 60.8 79 36.7
Manes.06G081500 Manihot esculenta HOM05D000186 ORTHO05D002091 8.0e-08 60.8 51 56.9
Lalb_Chr12g0197351 Lupinus albus HOM05D000186 ORTHO05D002091 1.4e-07 60.1 72 41.7
Medtr4g109890 Medicago truncatula HOM05D000186 ORTHO05D002091 1.4e-07 60.1 70 41.4
PGR083G2066 Punica granatum HOM05D000186 ORTHO05D002091 1.8e-07 59.7 55 54.5
Psat1g126600 Pisum sativum HOM05D000186 ORTHO05D002091 2.3e-07 59.3 70 42.9
Sc12g0006900 Simmondsia chinensis HOM05D000186 ORTHO05D002091 3.0e-07 58.9 52 55.8
Ah.02g114220 Amaranthus hybridus HOM05D000186 ORTHO05D002091 5.2e-07 58.2 62 53.2
Psat4g046160 Pisum sativum HOM05D000186 ORTHO05D002091 5.2e-07 58.2 70 40.0
AT1G18580 Arabidopsis thaliana HOM05D000186 ORTHO05D002091 6.8e-07 57.8 62 46.8
EL10Ac5g11186 Beta vulgaris HOM05D000186 ORTHO05D002091 2.0e-06 56.2 62 53.2
TPR.G14361 Trifolium pratense HOM05D000186 ORTHO05D002091 3.4e-06 55.5 55 52.7
Peaxi162Scf00017g03286 Petunia axillaris HOM05D000186 ORTHO05D002091 4.4e-06 55.1 38 65.8
Ah.11g047460 Amaranthus hybridus HOM05D000186 ORTHO05D002091 5.7e-06 54.7 52 53.8
AL1G31020 Arabidopsis lyrata HOM05D000186 ORTHO05D002091 7.5e-06 54.3 63 44.4
Lalb_Chr13g0302701 Lupinus albus HOM05D000186 ORTHO05D002091 7.5e-06 54.3 70 38.6
THA.LOC104813892 Tarenaya hassleriana HOM05D000186 ORTHO05D002091 9.8e-06 53.9 66 42.4


User provided reference genes

Program Settings