Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17572 Vaccinium macrocarpon HOM05D007068 ORTHO05D008590 1.4e-41 172.6 87 100.0
Rhsim08G0124500 Rhododendron simsii HOM05D007068 ORTHO05D008590 7.3e-27 123.6 82 78.0
Dinv17551 Davidia involucrata HOM05D007068 ORTHO05D008590 1.2e-21 106.3 82 64.6
SalBow1G5613 Salvia bowleyana HOM05D007068 ORTHO05D008590 1.0e-20 103.2 83 59.0
Nitab4.5_0003401g0040 Nicotiana tabacum HOM05D007068 ORTHO05D008590 3.3e-19 98.2 83 57.8
Nitab4.5_0004556g0050 Nicotiana tabacum HOM05D007068 ORTHO05D008590 4.3e-19 97.8 83 57.8
CSS0009831 Camellia sinensis var. sinensis HOM05D007068 ORTHO05D008590 9.5e-19 96.7 83 59.0
Oeu031766.1 Olea europaea HOM05D007068 ORTHO05D008590 9.5e-19 96.7 86 58.1
Solyc03g118700.3 Solanum lycopersicum HOM05D007068 ORTHO05D008590 1.2e-18 96.3 83 56.6
TAR622G0435 Trochodendron aralioides HOM05D007068 ORTHO05D008590 1.2e-18 96.3 82 61.0
Actinidia39838 Actinidia chinensis HOM05D007068 ORTHO05D008590 1.6e-18 95.9 83 61.4
CAN.G843.56 Capsicum annuum HOM05D007068 ORTHO05D008590 2.1e-18 95.5 83 57.8
SGA_v2.0_scaffold36G14383 Striga asiatica HOM05D007068 ORTHO05D008590 2.1e-18 95.5 82 54.9
Cfa019656 Carpinus fangiana HOM05D007068 ORTHO05D008590 2.8e-18 95.1 83 59.0
PGSC0003DMG400005672 Solanum tuberosum HOM05D007068 ORTHO05D008590 2.8e-18 95.1 83 56.6
Prupe.5G233500 Prunus persica HOM05D007068 ORTHO05D008590 4.7e-18 94.4 60 75.0
GSVIVG01011540001 Vitis vinifera HOM05D007068 ORTHO05D008590 4.7e-18 94.4 83 59.0
CANSAT80G0386 Cannabis sativa HOM05D007068 ORTHO05D008590 6.2e-18 94.0 80 67.5
Eucgr.K02273 Eucalyptus grandis HOM05D007068 ORTHO05D008590 8.1e-18 93.6 83 57.8
Potri.012G047000 Populus trichocarpa HOM05D007068 ORTHO05D008590 8.1e-18 93.6 83 56.6
arahy.Tifrunner.gnm1.ann1.N01HH5 Arachis hypogaea HOM05D007068 ORTHO05D008590 1.1e-17 93.2 83 56.6
EL10Ac4g08480 Beta vulgaris HOM05D007068 ORTHO05D008590 1.1e-17 93.2 80 60.0
AUR62037972 Chenopodium quinoa HOM05D007068 ORTHO05D008590 1.1e-17 93.2 83 57.8
COL.COLO4_04377 Corchorus olitorius HOM05D007068 ORTHO05D008590 1.4e-17 92.8 60 76.7
QL10p029594 Quercus lobata HOM05D007068 ORTHO05D008590 1.4e-17 92.8 82 59.8
Sabra12G0033000 Salix brachista HOM05D007068 ORTHO05D008590 1.4e-17 92.8 83 56.6
arahy.Tifrunner.gnm1.ann1.ZH8P6D Arachis hypogaea HOM05D007068 ORTHO05D008590 1.8e-17 92.4 83 56.6
FvH4_5g17330 Fragaria vesca HOM05D007068 ORTHO05D008590 1.8e-17 92.4 83 59.0
FAN18G2889 Fragaria x ananassa HOM05D007068 ORTHO05D008590 1.8e-17 92.4 83 59.0
Migut.D01541 Erythranthe guttata HOM05D007068 ORTHO05D008590 2.4e-17 92.0 83 51.8
FAN13G0457 Fragaria x ananassa HOM05D007068 ORTHO05D008590 2.4e-17 92.0 82 58.5
Nn3g18277 Nelumbo nucifera HOM05D007068 ORTHO05D008590 5.2e-17 90.9 83 59.0
Aqoxy3G00060 Aquilegia oxysepala HOM05D007068 ORTHO05D008590 6.8e-17 90.5 84 58.3
Cpa.g.sc3.397 Carica papaya HOM05D007068 ORTHO05D008590 6.8e-17 90.5 83 54.2
CiPaw.16G093400 Carya illinoinensis HOM05D007068 ORTHO05D008590 6.8e-17 90.5 83 57.8
BcaC08g43059 Brassica carinata HOM05D007068 ORTHO05D008590 8.9e-17 90.1 81 58.0
C06p03180 Brassica napus HOM05D007068 ORTHO05D008590 8.9e-17 90.1 81 58.0
BolC6t35436H Brassica oleracea HOM05D007068 ORTHO05D008590 8.9e-17 90.1 81 58.0
Duzib084G0836 Durio zibethinus HOM05D007068 ORTHO05D008590 1.2e-16 89.7 60 75.0
A06p04350 Brassica napus HOM05D007068 ORTHO05D008590 2.6e-16 88.6 81 56.8
Thecc.03G056900 Theobroma cacao HOM05D007068 ORTHO05D008590 2.6e-16 88.6 60 71.7
Lj4g0019727 Lotus japonicus HOM05D007068 ORTHO05D008590 3.4e-16 88.2 83 54.2
RcHm_v2.0_Chr7g0178441 Rosa chinensis HOM05D007068 ORTHO05D008590 3.4e-16 88.2 83 56.6
BcaB07g33743 Brassica carinata HOM05D007068 ORTHO05D008590 4.4e-16 87.8 58 69.0
BraA06t23639Z Brassica rapa HOM05D007068 ORTHO05D008590 4.4e-16 87.8 58 69.0
Ah.06g187490 Amaranthus hybridus HOM05D007068 ORTHO05D008590 7.6e-16 87.0 80 55.0
AL1G55220 Arabidopsis lyrata HOM05D007068 ORTHO05D008590 7.6e-16 87.0 81 54.3
AT1G48580 Arabidopsis thaliana HOM05D007068 ORTHO05D008590 7.6e-16 87.0 81 54.3
Thhalv10011472m.g Eutrema salsugineum HOM05D007068 ORTHO05D008590 9.9e-16 86.7 58 69.0
TPR.G1401 Trifolium pratense HOM05D007068 ORTHO05D008590 9.9e-16 86.7 59 67.8
Ciclev10008793m.g Citrus clementina HOM05D007068 ORTHO05D008590 1.3e-15 86.3 60 68.3
Sed0003101 Sechium edule HOM05D007068 ORTHO05D008590 1.3e-15 86.3 83 54.2
Atru.chr9.1734 Acer truncatum HOM05D007068 ORTHO05D008590 2.2e-15 85.5 83 54.2
Aa31LG10G5220 Aethionema arabicum HOM05D007068 ORTHO05D008590 2.2e-15 85.5 57 70.2
Ca_17189_v3 Cicer arietinum L. HOM05D007068 ORTHO05D008590 2.2e-15 85.5 83 53.0
Gohir.A07G061700 Gossypium hirsutum HOM05D007068 ORTHO05D008590 2.2e-15 85.5 60 70.0
Hund10357 Selenicereus undatus HOM05D007068 ORTHO05D008590 3.8e-15 84.7 80 55.0
Sp1g35530 Schrenkiella parvula HOM05D007068 ORTHO05D008590 4.9e-15 84.3 58 65.5
Haze_18849 Corylus avellana HOM05D007068 ORTHO05D008590 6.4e-15 84.0 60 65.0
Gohir.D07G066400 Gossypium hirsutum HOM05D007068 ORTHO05D008590 6.4e-15 84.0 60 71.7
HanXRQChr14g0431751 Helianthus annuus HOM05D007068 ORTHO05D008590 1.1e-14 83.2 60 65.0
CARHR038180 Cardamine hirsuta HOM05D007068 ORTHO05D008590 1.4e-14 82.8 58 67.2
CDE02G3810 Ceratophyllum demersum HOM05D007068 ORTHO05D008590 1.4e-14 82.8 79 51.9
CsaV3_1G004370 Cucumis sativus L. HOM05D007068 ORTHO05D008590 1.4e-14 82.8 83 55.4
Hma1.2p1_0669F.1_g200120 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 1.4e-14 82.8 83 50.6
PSO017G3869 Papaver somniferum HOM05D007068 ORTHO05D008590 1.4e-14 82.8 82 53.7
PSO478G2297 Papaver somniferum HOM05D007068 ORTHO05D008590 1.4e-14 82.8 82 53.7
MELO3C017359.2 Cucumis melo HOM05D007068 ORTHO05D008590 1.9e-14 82.4 83 55.4
Gorai.001G070000 Gossypium raimondii HOM05D007068 ORTHO05D008590 3.2e-14 81.6 60 70.0
Medtr8g107330 Medicago truncatula HOM05D007068 ORTHO05D008590 3.2e-14 81.6 83 51.8
ClCG06G014310 Citrullus lanatus HOM05D007068 ORTHO05D008590 4.2e-14 81.3 56 71.4
Carub.0001s3769 Capsella rubella HOM05D007068 ORTHO05D008590 5.4e-14 80.9 81 51.9
ECA238G2622 Erigeron canadensis HOM05D007068 ORTHO05D008590 5.4e-14 80.9 61 60.7
Lalb_Chr16g0386991 Lupinus albus HOM05D007068 ORTHO05D008590 5.4e-14 80.9 82 51.2
SEGI_36605 Sequoiadendron giganteum HOM05D007068 ORTHO05D008590 1.2e-13 79.7 82 48.8
Lsat_1_v5_gn_2_14700 Lactuca sativa HOM05D007068 ORTHO05D008590 1.6e-13 79.3 60 65.0
MBI13_g47078_MAGBIO Magnolia biondii HOM05D007068 ORTHO05D008590 1.6e-13 79.3 81 50.6
Peaxi162Scf00683g00454 Petunia axillaris HOM05D007068 ORTHO05D008590 2.1e-13 79.0 74 52.7
VMungo0251G0101 Vigna mungo HOM05D007068 ORTHO05D008590 2.7e-13 78.6 83 50.6
ATR0618G302 Amborella trichopoda HOM05D007068 ORTHO05D008590 6.0e-13 77.4 82 51.2
FAN04G2769 Fragaria x ananassa HOM05D007068 ORTHO05D008590 7.8e-13 77.0 83 53.0
Phvul.002G330100 Phaseolus vulgaris HOM05D007068 ORTHO05D008590 7.8e-13 77.0 83 50.6
Psat7g003560 Pisum sativum HOM05D007068 ORTHO05D008590 7.8e-13 77.0 60 61.7
Peaxi162Scf00683g00453 Petunia axillaris HOM05D007068 ORTHO05D008590 1.0e-12 76.6 76 50.0
SMO164G0105 Selaginella moellendorffii HOM05D020476 ORTHO05D008590 1.0e-12 76.6 83 44.6
SMO164G0186 Selaginella moellendorffii HOM05D007068 ORTHO05D008590 1.3e-12 76.3 83 44.6
Cc04_g06260 Coffea canephora HOM05D007068 ORTHO05D008590 3.9e-12 74.7 83 49.4
DCAR_014504 Daucus carota HOM05D007068 ORTHO05D008590 3.9e-12 74.7 63 57.1
HPP92_002012 Vanilla planifolia HOM05D007068 ORTHO05D008590 6.6e-12 73.9 84 48.8
AagrBONN_evm.TU.Sc2ySwM_362.2609 Anthoceros agrestis HOM05D007068 ORTHO05D008590 5.6e-11 70.9 59 55.9
Glyma.08G054400 Glycine max HOM05D007068 ORTHO05D008590 2.8e-10 68.6 84 45.2
MD06G1227000 Malus domestica HOM05D007068 ORTHO05D008590 1.1e-09 66.6 101 41.6
VMungo0251G0567 Vigna mungo HOM05D007068 ORTHO05D008590 6.9e-09 63.9 56 48.2
Hma1.2p1_0669F.1_g200130 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 1.2e-08 63.2 62 51.6
Mapoly0060s0110 Marchantia polymorpha HOM05D007068 ORTHO05D008590 2.0e-08 62.4 60 50.0
Zm00001eb304630 Zea mays HOM05D007068 ORTHO05D008590 4.4e-08 61.2 59 47.5


User provided reference genes

Program Settings