Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17568 Vaccinium macrocarpon HOM05D007763 ORTHO05D009537 4.1e-173 611.3 312 100.0
Rhsim08G0152400 Rhododendron simsii HOM05D000001 ORTHO05D010304 7.9e-31 138.7 104 74.0
Manes.14G081200 Manihot esculenta HOM05D007763 ORTHO05D009537 1.6e-23 114.4 134 47.0
CSS0022156 Camellia sinensis var. sinensis HOM05D007763 ORTHO05D009537 5.1e-22 109.4 104 53.8
Actinidia04871 Actinidia chinensis HOM05D007763 ORTHO05D009537 4.3e-21 106.3 111 59.5
TPR.G27557 Trifolium pratense HOM05D007763 ORTHO05D009537 4.8e-20 102.8 109 46.8
Thecc.03G093400 Theobroma cacao HOM05D007763 ORTHO05D009537 4.5e-18 96.3 107 44.9
FvH4_5g14610 Fragaria vesca HOM05D007763 ORTHO05D009537 1.0e-17 95.1 108 43.5
RcHm_v2.0_Chr7g0181881 Rosa chinensis HOM05D007763 ORTHO05D009537 1.0e-17 95.1 102 45.1
Lalb_Chr08g0235511 Lupinus albus HOM05D007763 ORTHO05D009537 1.3e-17 94.7 89 55.1
Atru.chr12.1670 Acer truncatum HOM05D007763 ORTHO05D009537 2.9e-17 93.6 91 60.4
Atru.chr12.1664 Acer truncatum HOM05D007763 ORTHO05D009537 1.1e-16 91.7 91 59.3
AUR62021645 Chenopodium quinoa HOM05D007763 ORTHO05D009537 2.1e-15 87.4 114 41.2
FAN13G0255 Fragaria x ananassa HOM05D007763 ORTHO05D009537 6.0e-15 85.9 83 45.8
FAN18G1924 Fragaria x ananassa HOM05D007763 ORTHO05D009537 6.0e-15 85.9 83 48.2
Ciclev10024595m.g Citrus clementina HOM05D007763 ORTHO05D009537 5.1e-14 82.8 91 44.0
Lsat_1_v5_gn_5_21540 Lactuca sativa HOM05D007763 ORTHO05D009537 6.7e-14 82.4 85 54.1
EL10Ac5g11053 Beta vulgaris HOM05D014602 ORTHO05D009537 1.5e-13 81.3 117 45.3
Ca_14664_v3 Cicer arietinum L. HOM05D007763 ORTHO05D009537 5.7e-13 79.3 104 46.2
Lj9C466T13 Lonicera japonica HOM05D007763 ORTHO05D009537 2.2e-12 77.4 104 50.0
ECA246G2275 Erigeron canadensis HOM05D007763 ORTHO05D009537 6.3e-12 75.9 89 52.8
THA.LOC104801471 Tarenaya hassleriana HOM05D007763 ORTHO05D009537 8.2e-12 75.5 81 43.2
LjContig00102g0005353 Lotus japonicus HOM05D000001 ORTHO05D010304 1.1e-11 75.1 104 48.1
Phvul.009G185566 Phaseolus vulgaris HOM05D007763 ORTHO05D009537 1.1e-11 75.1 101 46.5
MSTRG.11374 Avicennia marina HOM05D007763 ORTHO05D009537 1.4e-11 74.7 115 47.0
HanXRQChr08g0236691 Helianthus annuus HOM05D007763 ORTHO05D009537 2.4e-11 73.9 89 50.6
Atru.chr12.1659 Acer truncatum HOM05D007763 ORTHO05D009537 3.1e-11 73.6 86 54.7
Gohir.A03G067600 Gossypium hirsutum HOM05D007763 ORTHO05D009537 6.9e-11 72.4 102 45.1
Gohir.D03G094100 Gossypium hirsutum HOM05D007763 ORTHO05D009537 1.2e-10 71.6 102 45.1
Hma1.2p1_0060F.1_g033520 Hydrangea macrophylla HOM05D007763 ORTHO05D009537 2.6e-10 70.5 110 43.6
Gorai.003G098200 Gossypium raimondii HOM05D007763 ORTHO05D009537 5.9e-10 69.3 84 51.2
TWI60G1313 Tripterygium wilfordii HOM05D007763 ORTHO05D009537 5.9e-10 69.3 103 47.6
COL.COLO4_36930 Corchorus olitorius HOM05D007763 ORTHO05D009537 1.0e-09 68.6 95 43.2
Peaxi162Scf00013g00410 Petunia axillaris HOM05D007763 ORTHO05D009537 1.0e-09 68.6 110 42.7
Ah.02g113700 Amaranthus hybridus HOM05D007763 ORTHO05D009537 8.5e-09 65.5 80 42.5
arahy.Tifrunner.gnm1.ann1.NWYI6Z Arachis hypogaea HOM05D000001 ORTHO05D010304 8.5e-09 65.5 55 49.1
Solyc06g069700.4 Solanum lycopersicum HOM05D007763 ORTHO05D009537 8.5e-09 65.5 111 42.3
Thhalv10005336m.g Eutrema salsugineum HOM05D007763 ORTHO05D009537 1.1e-08 65.1 103 35.9
CARHR275160 Cardamine hirsuta HOM05D007763 ORTHO05D009537 1.4e-08 64.7 80 38.8
Medtr3g037490 Medicago truncatula HOM05D007763 ORTHO05D009537 1.4e-08 64.7 55 49.1
Nitab4.5_0004286g0010 Nicotiana tabacum HOM05D007763 ORTHO05D009537 3.2e-08 63.5 110 42.7
Sopen06g027000 Solanum pennellii HOM05D007763 ORTHO05D009537 3.2e-08 63.5 111 41.4
Migut.I00207 Erythranthe guttata HOM05D007763 ORTHO05D009537 4.2e-08 63.2 55 49.1
Aa31LG11G2020 Aethionema arabicum HOM05D007763 ORTHO05D009537 5.5e-08 62.8 81 38.3
arahy.Tifrunner.gnm1.ann1.PFL66H Arachis hypogaea HOM05D007763 ORTHO05D009537 5.5e-08 62.8 54 48.1
Nitab4.5_0003021g0070 Nicotiana tabacum HOM05D007763 ORTHO05D009537 1.6e-07 61.2 56 51.8
BcaC04g23450 Brassica carinata HOM05D007763 ORTHO05D009537 2.1e-07 60.8 79 35.4
C09p08190 Brassica napus HOM05D007763 ORTHO05D009537 2.1e-07 60.8 79 35.4
BolC9t53731H Brassica oleracea HOM05D007763 ORTHO05D009537 2.1e-07 60.8 79 35.4
Carub.0008s2207 Capsella rubella HOM05D007763 ORTHO05D009537 3.6e-07 60.1 80 36.2
CAN.G587.9 Capsicum annuum HOM05D007763 ORTHO05D009537 3.6e-07 60.1 53 54.7
DCAR_002300 Daucus carota HOM05D007763 ORTHO05D009537 4.6e-07 59.7 105 41.0
BraA09t36381Z Brassica rapa HOM05D007763 ORTHO05D009537 6.1e-07 59.3 89 32.6
Psat5g201000 Pisum sativum HOM05D007763 ORTHO05D009537 6.1e-07 59.3 109 38.5
AL8G38070 Arabidopsis lyrata HOM05D007763 ORTHO05D009537 7.9e-07 58.9 102 31.4
BcaNung06902 Brassica carinata HOM05D007763 ORTHO05D009537 7.9e-07 58.9 79 35.4
AUR62008445 Chenopodium quinoa HOM05D007763 ORTHO05D009537 5.1e-06 56.2 96 42.7
PGR031G2821 Punica granatum HOM05D007763 ORTHO05D009537 5.1e-06 56.2 68 44.1
Duzib205G0970 Durio zibethinus HOM05D007763 ORTHO05D009537 6.7e-06 55.8 91 42.9


User provided reference genes

Program Settings