Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17551 Vaccinium macrocarpon HOM05D006541 ORTHO05D000277 2.8e-277 958.0 493 100.0
vmacro07718 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 1.8e-37 161.4 161 59.6
vmacro08892 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 2.4e-34 151.0 172 59.3
Rhsim04G0059300 Rhododendron simsii HOM05D000034 ORTHO05D000277 4.9e-27 126.7 205 44.9
Rhsim05G0045400 Rhododendron simsii HOM05D000034 ORTHO05D000277 4.9e-27 126.7 216 43.5
Rhsim02G0154600 Rhododendron simsii HOM05D000034 ORTHO05D000277 8.6e-24 115.9 256 37.5
Rhsim02G0247200 Rhododendron simsii HOM05D000034 ORTHO05D000277 8.6e-24 115.9 238 37.4
Rhsim07G0014400 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.1e-23 115.5 263 36.5
vmacro04283 Vaccinium macrocarpon HOM05D004435 ORTHO05D005103 1.5e-23 115.2 77 71.4
RhsimUnG0197200 Rhododendron simsii HOM05D000034 ORTHO05D000277 3.3e-23 114.0 256 36.3
Rhsim03G0108500 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.6e-22 111.7 250 36.4
Rhsim07G0003000 Rhododendron simsii HOM05D004435 ORTHO05D005103 2.8e-22 110.9 77 68.8
RhsimUnG0131900 Rhododendron simsii HOM05D000034 ORTHO05D000277 8.1e-22 109.4 206 40.3
vmacro17549 Vaccinium macrocarpon HOM05D006541 ORTHO05D008471 8.1e-22 109.4 63 90.5
Rhsim08G0155500 Rhododendron simsii HOM05D006541 ORTHO05D008471 1.5e-20 105.1 62 87.1
Rhsim13G0113900 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.9e-18 98.2 235 35.7
Actinidia20252 Actinidia chinensis HOM05D004435 ORTHO05D005103 1.2e-17 95.5 66 65.2
Actinidia04898 Actinidia chinensis HOM05D006541 ORTHO05D008471 6.0e-17 93.2 63 74.6
Rhsim12G0050700 Rhododendron simsii HOM05D000034 ORTHO05D000277 6.0e-17 93.2 95 61.1
Actinidia37633 Actinidia chinensis HOM05D006541 ORTHO05D008471 1.7e-16 91.7 57 73.7
Dinv38701 Davidia involucrata HOM05D006541 ORTHO05D008471 1.7e-16 91.7 50 82.0
Peaxi162Scf00274g00732 Petunia axillaris HOM05D006541 ORTHO05D008471 6.6e-16 89.7 50 82.0
CSS0004518 Camellia sinensis var. sinensis HOM05D006541 ORTHO05D008471 8.6e-16 89.4 50 82.0
CSS0042048 Camellia sinensis var. sinensis HOM05D006541 ORTHO05D008471 8.6e-16 89.4 83 62.7
Rhsim10G0022500 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.5e-15 88.6 101 55.4
Hma1.2p1_0104F.1_g049970 Hydrangea macrophylla HOM05D006541 ORTHO05D008471 1.9e-15 88.2 71 63.4
TWI60G0844 Tripterygium wilfordii HOM05D006541 ORTHO05D008471 1.9e-15 88.2 50 82.0
Duzib205G0457 Durio zibethinus HOM05D006541 ORTHO05D008471 3.3e-15 87.4 50 78.0
HanXRQChr02g0041061 Helianthus annuus HOM05D006541 ORTHO05D008471 4.3e-15 87.0 50 84.0
THA.LOC104821445 Tarenaya hassleriana HOM05D006541 ORTHO05D008471 5.6e-15 86.7 50 78.0
Gohir.D03G093000 Gossypium hirsutum HOM05D006541 ORTHO05D008471 7.3e-15 86.3 50 76.0
Gorai.003G096900 Gossypium raimondii HOM05D006541 ORTHO05D008471 7.3e-15 86.3 50 76.0
Lj5A111T86 Lonicera japonica HOM05D006541 ORTHO05D008471 7.3e-15 86.3 50 78.0
Oeu006508.1 Olea europaea HOM05D006541 ORTHO05D008471 9.6e-15 85.9 50 74.0
Solyc03g116140.3 Solanum lycopersicum HOM05D006541 ORTHO05D008471 9.6e-15 85.9 50 78.0
Sopen03g035110 Solanum pennellii HOM05D006541 ORTHO05D008471 9.6e-15 85.9 50 78.0
CSS0028718 Camellia sinensis var. sinensis HOM05D004435 ORTHO05D005103 1.2e-14 85.5 76 52.6
Eucgr.B00491 Eucalyptus grandis HOM05D006541 ORTHO05D008471 1.2e-14 85.5 50 76.0
Atru.chr9.2260 Acer truncatum HOM05D006541 ORTHO05D008471 1.6e-14 85.1 50 76.0
PGSC0003DMG400019513 Solanum tuberosum HOM05D006541 ORTHO05D008471 1.6e-14 85.1 50 76.0
Lsat_1_v5_gn_1_13281 Lactuca sativa HOM05D006541 ORTHO05D008471 2.1e-14 84.7 50 78.0
Cc04_g16740 Coffea canephora HOM05D006541 ORTHO05D008471 2.8e-14 84.3 50 74.0
Nitab4.5_0012137g0020 Nicotiana tabacum HOM05D006541 ORTHO05D008471 6.2e-14 83.2 50 74.0
Gohir.A03G066400 Gossypium hirsutum HOM05D006541 ORTHO05D008471 8.1e-14 82.8 50 74.0
Sp5g14300 Schrenkiella parvula HOM05D006541 ORTHO05D008471 8.1e-14 82.8 46 80.4
TAR629G1448 Trochodendron aralioides HOM05D006541 ORTHO05D008471 8.1e-14 82.8 47 76.6
GSVIVG01008019001 Vitis vinifera HOM05D006541 ORTHO05D008471 8.1e-14 82.8 50 74.0
AT3G47610 Arabidopsis thaliana HOM05D006541 ORTHO05D008471 1.1e-13 82.4 46 78.3
Nn4g23149 Nelumbo nucifera HOM05D006541 ORTHO05D008471 1.1e-13 82.4 47 78.7
PGR083G1696 Punica granatum HOM05D006541 ORTHO05D008471 1.1e-13 82.4 50 72.0
SGA_v2.0_scaffold25G10913 Striga asiatica HOM05D006541 ORTHO05D008471 1.4e-13 82.0 188 35.1
CAN.G837.10 Capsicum annuum HOM05D006541 ORTHO05D008471 2.4e-13 81.3 50 70.0
Thhalv10010423m.g Eutrema salsugineum HOM05D006541 ORTHO05D008471 2.4e-13 81.3 46 76.1
FvH4_5g15050 Fragaria vesca HOM05D006541 ORTHO05D008471 3.1e-13 80.9 50 74.0
FAN04G2599 Fragaria x ananassa HOM05D006541 ORTHO05D008471 3.1e-13 80.9 50 74.0
FAN08G2919 Fragaria x ananassa HOM05D006541 ORTHO05D008471 3.1e-13 80.9 50 74.0
FAN18G0374 Fragaria x ananassa HOM05D006541 ORTHO05D008471 3.1e-13 80.9 50 74.0
Thecc.03G085100 Theobroma cacao HOM05D006541 ORTHO05D008471 5.2e-13 80.1 52 73.1
Aa31LG4G16360 Aethionema arabicum HOM05D006541 ORTHO05D008471 6.8e-13 79.7 53 71.7
EL10Ac5g10987 Beta vulgaris HOM05D006541 ORTHO05D008471 6.8e-13 79.7 50 72.0
ECA247G0129 Erigeron canadensis HOM05D006541 ORTHO05D008471 6.8e-13 79.7 50 74.0
Migut.I00173 Erythranthe guttata HOM05D006541 ORTHO05D008471 6.8e-13 79.7 50 68.0
Nitab4.5_0000842g0050 Nicotiana tabacum HOM05D006541 ORTHO05D008471 6.8e-13 79.7 50 72.0
Sc12g0006320 Simmondsia chinensis HOM05D006541 ORTHO05D008471 8.9e-13 79.3 50 72.0
TAR371G1054 Trochodendron aralioides HOM05D006541 ORTHO05D008471 8.9e-13 79.3 47 72.3
MSTRG.11386 Avicennia marina HOM05D006541 ORTHO05D008471 1.5e-12 78.6 50 66.0
BcaB01g00902 Brassica carinata HOM05D006541 ORTHO05D008471 1.5e-12 78.6 46 73.9
A06p20010 Brassica napus HOM05D006541 ORTHO05D008471 1.5e-12 78.6 46 73.9
BraA06t25087Z Brassica rapa HOM05D006541 ORTHO05D008471 1.5e-12 78.6 46 73.9
MELO3C035773.2 Cucumis melo HOM05D006541 ORTHO05D008471 1.5e-12 78.6 53 67.9
Ciclev10020397m.g Citrus clementina HOM05D006541 ORTHO05D008471 2.0e-12 78.2 50 72.0
Haze_07334 Corylus avellana HOM05D006541 ORTHO05D008471 2.0e-12 78.2 52 73.1
Dinv34221 Davidia involucrata HOM05D004435 ORTHO05D005103 2.0e-12 78.2 105 37.1
CANSAT25G3319 Cannabis sativa HOM05D006541 ORTHO05D008471 2.6e-12 77.8 49 67.3
MBI05_g08285_MAGBIO Magnolia biondii HOM05D006541 ORTHO05D008471 2.6e-12 77.8 50 68.0
PSO063G0566 Papaver somniferum HOM05D006541 ORTHO05D008471 2.6e-12 77.8 47 68.1
Rhsim02G0144500 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.6e-12 77.8 101 49.5
RcHm_v2.0_Chr7g0181151 Rosa chinensis HOM05D006541 ORTHO05D008471 2.6e-12 77.8 53 69.8
BcaC01g01798 Brassica carinata HOM05D006541 ORTHO05D008471 3.4e-12 77.4 46 69.6
C03p71820 Brassica napus HOM05D006541 ORTHO05D008471 3.4e-12 77.4 46 69.6
CsaV3_1G005410 Cucumis sativus L. HOM05D006541 ORTHO05D008471 3.4e-12 77.4 51 68.6
Ah.11g048540 Amaranthus hybridus HOM05D006541 ORTHO05D008471 4.4e-12 77.0 50 70.0
AL5G26900 Arabidopsis lyrata HOM05D006541 ORTHO05D008471 5.8e-12 76.6 180 33.3
Hund02657 Selenicereus undatus HOM05D006541 ORTHO05D008471 5.8e-12 76.6 50 70.0
Cfa018953 Carpinus fangiana HOM05D006541 ORTHO05D008471 9.9e-12 75.9 52 71.2
Haze_07335 Corylus avellana HOM05D006541 ORTHO05D008471 9.9e-12 75.9 83 53.0
Prupe.5G192200 Prunus persica HOM05D006541 ORTHO05D008471 1.3e-11 75.5 50 70.0
CARHR156290 Cardamine hirsuta HOM05D006541 ORTHO05D008471 1.7e-11 75.1 182 36.3
DCAR_016545 Daucus carota HOM05D006541 ORTHO05D008471 1.7e-11 75.1 53 66.0
Medtr4g108590 Medicago truncatula HOM05D006541 ORTHO05D008471 2.2e-11 74.7 52 71.2
QL10p016702 Quercus lobata HOM05D006541 ORTHO05D008471 2.9e-11 74.3 52 69.2
Carub.0005s1374 Capsella rubella HOM05D006541 ORTHO05D008471 3.8e-11 73.9 193 32.6
Lalb_Chr07g0178001 Lupinus albus HOM05D006541 ORTHO05D008471 3.8e-11 73.9 63 63.5
AUR62021701 Chenopodium quinoa HOM05D006541 ORTHO05D008471 4.9e-11 73.6 50 64.0
AUR62008395 Chenopodium quinoa HOM05D006541 ORTHO05D008471 8.4e-11 72.8 50 64.0
COL.COLO4_24520 Corchorus olitorius HOM05D000087 ORTHO05D008471 1.1e-10 72.4 63 58.7
Ca_21826_v3 Cicer arietinum L. HOM05D006541 ORTHO05D008471 1.4e-10 72.0 63 60.3
ClCG04G012330 Citrullus lanatus HOM05D006541 ORTHO05D008471 1.4e-10 72.0 47 70.2
MD06G1192400 Malus domestica HOM05D006541 ORTHO05D008471 1.4e-10 72.0 50 70.0
Aqoxy3G03367 Aquilegia oxysepala HOM05D006541 ORTHO05D008471 1.9e-10 71.6 50 66.0
Phvul.003G190700 Phaseolus vulgaris HOM05D006541 ORTHO05D008471 1.9e-10 71.6 60 63.3
Psat4g051480 Pisum sativum HOM05D006541 ORTHO05D008471 1.9e-10 71.6 182 35.7
BolC3t19470H Brassica oleracea HOM05D006541 ORTHO05D008471 2.4e-10 71.2 180 31.7
arahy.Tifrunner.gnm1.ann1.84ES4F Arachis hypogaea HOM05D006541 ORTHO05D008471 4.2e-10 70.5 52 67.3
arahy.Tifrunner.gnm1.ann1.ZY6HCY Arachis hypogaea HOM05D006541 ORTHO05D008471 4.2e-10 70.5 52 67.3
Glyma.17G099300 Glycine max HOM05D006541 ORTHO05D008471 4.2e-10 70.5 60 63.3
VMungo1215G1397 Vigna mungo HOM05D006541 ORTHO05D008471 5.4e-10 70.1 60 65.0
MD14G1199100 Malus domestica HOM05D006541 ORTHO05D008471 7.1e-10 69.7 60 60.0
TPR.G34732 Trifolium pratense HOM05D006541 ORTHO05D008471 7.1e-10 69.7 64 57.8
Manes.06G093400 Manihot esculenta HOM05D006541 ORTHO05D008471 1.2e-09 68.9 78 50.0
CiPaw.11G043400 Carya illinoinensis HOM05D006541 ORTHO05D008471 1.6e-09 68.6 189 33.9
unitig_0.g2528 Utricularia gibba HOM05D006541 ORTHO05D008471 1.6e-09 68.6 49 61.2
Potri.012G068900 Populus trichocarpa HOM05D006541 ORTHO05D008471 2.1e-09 68.2 49 71.4
Sabra12G0049100 Salix brachista HOM05D006541 ORTHO05D008471 2.1e-09 68.2 49 71.4
CsaV3_1G005390 Cucumis sativus L. HOM05D006541 ORTHO05D008471 2.7e-09 67.8 77 49.4
Actinidia06690 Actinidia chinensis HOM05D000034 ORTHO05D000277 3.5e-09 67.4 263 28.5
MELO3C001974.2 Cucumis melo HOM05D006541 ORTHO05D008471 6.0e-09 66.6 78 48.7
Lj4g0004556 Lotus japonicus HOM05D006541 ORTHO05D008471 6.0e-09 66.6 62 58.1
Sed0004898 Sechium edule HOM05D006541 ORTHO05D008471 7.8e-09 66.2 73 53.4
SEGI_20393 Sequoiadendron giganteum HOM05D006541 ORTHO05D008471 1.3e-08 65.5 46 65.2
ATR0598G034 Amborella trichopoda HOM05D006541 ORTHO05D008471 1.7e-08 65.1 89 42.7
CDE06G2127 Ceratophyllum demersum HOM05D006541 ORTHO05D008471 2.3e-08 64.7 49 59.2
AagrBONN_evm.TU.Sc2ySwM_228.4960 Anthoceros agrestis HOM05D006541 ORTHO05D008471 5.1e-08 63.5 50 50.0
Cpa.g.c35819 Carica papaya HOM05D006541 ORTHO05D008471 5.1e-08 63.5 61 57.4
HPP92_016797 Vanilla planifolia HOM05D006541 ORTHO05D008471 5.1e-08 63.5 54 57.4
HPP92_016827 Vanilla planifolia HOM05D006541 ORTHO05D008471 5.1e-08 63.5 54 57.4
GSVIVG01027171001 Vitis vinifera HOM05D004435 ORTHO05D005103 6.6e-08 63.2 88 40.9
MBI06_g44136_MAGBIO Magnolia biondii HOM05D004435 ORTHO05D005103 1.5e-07 62.0 55 47.3
TAR374G0897 Trochodendron aralioides HOM05D004435 ORTHO05D005103 2.5e-07 61.2 59 45.8
Mapoly0060s0059 Marchantia polymorpha HOM05D006541 ORTHO05D003603 1.3e-06 58.9 50 54.0
Cfa003785 Carpinus fangiana HOM05D004435 ORTHO05D005103 2.1e-06 58.2 61 45.9
Eucgr.E00041 Eucalyptus grandis HOM05D004435 ORTHO05D005103 4.8e-06 57.0 106 37.7
Hma1.2p1_0101F.1_g049200 Hydrangea macrophylla HOM05D004435 ORTHO05D005103 4.8e-06 57.0 59 50.8
Zm00001eb312480 Zea mays HOM05D006541 ORTHO05D008471 6.2e-06 56.6 46 52.2
Haze_15676 Corylus avellana HOM05D004435 ORTHO05D005103 8.1e-06 56.2 55 47.3
Hma1.2p1_0101F.1_g049270 Hydrangea macrophylla HOM05D004435 ORTHO05D005103 8.1e-06 56.2 59 49.2


User provided reference genes

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