Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17385 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 1.3e-199 699.5 362 100.0
Actinidia32087 Actinidia chinensis HOM05D004157 ORTHO05D004860 1.3e-114 417.2 282 79.4
vmacro22690 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 2.9e-109 399.4 274 76.3
TWI75G1232 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 1.4e-108 397.1 282 75.2
TWI79G0156 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 7.1e-108 394.8 282 75.2
PGR042G1356 Punica granatum HOM05D004157 ORTHO05D004860 2.1e-107 393.3 284 72.9
Hma1.2p1_1385F.1_g279670 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 3.5e-107 392.5 282 73.4
PGR142G1140 Punica granatum HOM05D004157 ORTHO05D004860 3.5e-107 392.5 283 72.8
Potri.004G167200 Populus trichocarpa HOM05D004157 ORTHO05D004860 5.1e-106 388.7 283 72.4
TAR381G0601 Trochodendron aralioides HOM05D004157 ORTHO05D004860 6.6e-106 388.3 284 73.2
Cc02_g16620 Coffea canephora HOM05D004157 ORTHO05D004860 1.9e-105 386.7 284 72.9
QL11p047455 Quercus lobata HOM05D004157 ORTHO05D004860 7.3e-105 384.8 270 74.4
Cfa005173 Carpinus fangiana HOM05D004157 ORTHO05D004860 1.2e-104 384.0 276 72.8
Sabra09G0098500 Salix brachista HOM05D004157 ORTHO05D004860 1.2e-104 384.0 268 73.9
Thecc.02G068100 Theobroma cacao HOM05D004157 ORTHO05D004860 2.1e-104 383.3 284 71.1
Actinidia00586 Actinidia chinensis HOM05D004157 ORTHO05D004860 6.2e-104 381.7 286 73.1
PSO675G3214 Papaver somniferum HOM05D004157 ORTHO05D004860 8.1e-104 381.3 283 71.4
Aqoxy5G01458 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 1.1e-103 380.9 282 71.3
Eucgr.G01748 Eucalyptus grandis HOM05D004157 ORTHO05D004860 6.8e-103 378.3 282 70.6
PSO541G4423 Papaver somniferum HOM05D004157 ORTHO05D004860 6.8e-103 378.3 283 70.7
MD10G1116600 Malus domestica HOM05D004157 ORTHO05D004860 2.0e-102 376.7 282 69.1
HPP92_002547 Vanilla planifolia HOM05D004157 ORTHO05D004860 2.6e-102 376.3 290 68.6
GSVIVG01024109001 Vitis vinifera HOM05D004157 ORTHO05D004860 2.6e-102 376.3 282 69.5
CANSAT25G0852 Cannabis sativa HOM05D004157 ORTHO05D004860 3.4e-102 375.9 282 70.6
Glyma.04G005900 Glycine max HOM05D004157 ORTHO05D004860 9.9e-102 374.4 264 72.7
Glyma.06G005600 Glycine max HOM05D004157 ORTHO05D004860 1.3e-101 374.0 274 70.1
Nn5g30153 Nelumbo nucifera HOM05D004157 ORTHO05D004860 1.3e-101 374.0 284 69.4
Phvul.009G000600 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 1.3e-101 374.0 272 72.8
Solyc01g111060.4 Solanum lycopersicum HOM05D004157 ORTHO05D004860 1.7e-101 373.6 299 68.2
CiPaw.06G125600 Carya illinoinensis HOM05D000447 ORTHO05D000315 2.2e-101 373.2 257 75.9
Lj1g0011325 Lotus japonicus HOM05D004157 ORTHO05D004860 3.8e-101 372.5 282 70.6
Sc18g0006720 Simmondsia chinensis HOM05D004157 ORTHO05D004860 3.8e-101 372.5 282 69.1
Prupe.8G159400 Prunus persica HOM05D004157 ORTHO05D004860 6.4e-101 371.7 282 67.7
EL10Ac9g21458 Beta vulgaris HOM05D004157 ORTHO05D004860 1.1e-100 370.9 282 68.8
Sopen01g053120 Solanum pennellii HOM05D004157 ORTHO05D004860 2.4e-100 369.8 286 69.6
Gorai.005G251900 Gossypium raimondii HOM05D004157 ORTHO05D004860 5.4e-100 368.6 282 68.8
vmacro02241 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 5.4e-100 368.6 289 68.9
Ah.01g009470 Amaranthus hybridus HOM05D004157 ORTHO05D004860 2.1e-99 366.7 286 67.5
RcHm_v2.0_Chr6g0245651 Rosa chinensis HOM05D004157 ORTHO05D004860 2.7e-99 366.3 282 68.1
Atru.chr5.3210 Acer truncatum HOM05D004157 ORTHO05D004860 3.5e-99 365.9 260 72.7
Eucgr.G01749 Eucalyptus grandis HOM05D004157 ORTHO05D004860 3.5e-99 365.9 284 69.7
Lalb_Chr11g0061251 Lupinus albus HOM05D004157 ORTHO05D004860 3.5e-99 365.9 260 71.9
Gohir.D02G224100 Gossypium hirsutum HOM05D004157 ORTHO05D004860 4.6e-99 365.5 282 68.1
PGSC0003DMG400001636 Solanum tuberosum HOM05D004157 ORTHO05D004860 6.0e-99 365.2 286 69.6
Medtr3g117700 Medicago truncatula HOM05D004157 ORTHO05D004860 7.8e-99 364.8 268 70.1
Psat5g003520 Pisum sativum HOM05D004157 ORTHO05D004860 7.8e-99 364.8 268 71.3
TPR.G38481 Trifolium pratense HOM05D004157 ORTHO05D004860 7.8e-99 364.8 261 72.8
Gohir.A03G202800 Gossypium hirsutum HOM05D004157 ORTHO05D004860 1.7e-98 363.6 282 67.7
ECA234G4736 Erigeron canadensis HOM05D004157 ORTHO05D004860 2.3e-98 363.2 282 68.4
MELO3C013382.2 Cucumis melo HOM05D004157 ORTHO05D004860 3.0e-98 362.8 280 69.6
arahy.Tifrunner.gnm1.ann1.391TM2 Arachis hypogaea HOM05D004157 ORTHO05D004860 8.6e-98 361.3 261 73.2
arahy.Tifrunner.gnm1.ann1.66CLCN Arachis hypogaea HOM05D004157 ORTHO05D004860 8.6e-98 361.3 261 73.2
VMungo1309G1201 Vigna mungo HOM05D004157 ORTHO05D004860 1.5e-97 360.5 281 68.3
Manes.04G078800 Manihot esculenta HOM05D004157 ORTHO05D004860 2.5e-97 359.8 245 74.3
Migut.I00211 Erythranthe guttata HOM05D004157 ORTHO05D004860 3.3e-97 359.4 282 69.1
CsaV3_7G000760 Cucumis sativus L. HOM05D004157 ORTHO05D004860 4.3e-97 359.0 259 72.6
COL.COLO4_17245 Corchorus olitorius HOM05D004157 ORTHO05D004860 9.6e-97 357.8 319 61.8
HanXRQChr10g0294891 Helianthus annuus HOM05D004157 ORTHO05D004860 9.6e-97 357.8 282 68.4
Lsat_1_v5_gn_3_45521 Lactuca sativa HOM05D004157 ORTHO05D004860 9.6e-97 357.8 279 68.5
DCAR_003693 Daucus carota HOM05D004157 ORTHO05D004860 2.8e-96 356.3 354 56.5
THA.LOC104807783 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 2.8e-96 356.3 282 66.0
FAN24G0875 Fragaria x ananassa HOM05D004157 ORTHO05D004860 3.6e-96 355.9 282 65.2
Peaxi162Scf00362g01054 Petunia axillaris HOM05D004157 ORTHO05D004860 4.7e-96 355.5 277 69.0
FvH4_2g02150 Fragaria vesca HOM05D004157 ORTHO05D004860 1.1e-95 354.4 282 64.9
MSTRG.5432 Avicennia marina HOM05D004157 ORTHO05D004860 1.4e-95 354.0 282 67.4
PSO675G5417 Papaver somniferum HOM05D004157 ORTHO05D004860 1.4e-95 354.0 283 64.0
Ca_15317_v3 Cicer arietinum L. HOM05D000600 ORTHO05D004860 2.4e-95 353.2 251 72.9
PSO541G6022 Papaver somniferum HOM05D004157 ORTHO05D004860 2.4e-95 353.2 283 64.7
Sed0001494 Sechium edule HOM05D000447 ORTHO05D000315 5.2e-95 352.1 245 75.5
unitig_0.g2353 Utricularia gibba HOM05D004157 ORTHO05D004860 5.2e-95 352.1 282 66.7
FAN20G1131 Fragaria x ananassa HOM05D004157 ORTHO05D004860 1.2e-94 350.9 282 64.9
Lj5A185T60 Lonicera japonica HOM05D004157 ORTHO05D004860 4.4e-94 349.0 286 67.1
Os06g0112200 Oryza sativa ssp. japonica HOM05D004157 ORTHO05D004860 5.8e-94 348.6 282 63.1
AL7G10670 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 3.8e-93 345.9 283 63.6
Sed0017382 Sechium edule HOM05D004157 ORTHO05D004860 3.8e-93 345.9 244 74.6
Oeu055643.1 Olea europaea HOM05D004157 ORTHO05D004860 1.4e-92 344.0 250 71.6
Aqoxy2G00577 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 2.4e-92 343.2 268 67.5
SGA_v2.0_scaffold80G25867 Striga asiatica HOM05D004157 ORTHO05D004860 2.4e-92 343.2 282 66.0
Thhalv10025990m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 3.2e-92 342.8 283 62.9
Nitab4.5_0000283g0220 Nicotiana tabacum HOM05D004157 ORTHO05D004860 4.2e-92 342.4 280 67.1
CAN.G588.18 Capsicum annuum HOM05D004157 ORTHO05D004860 7.1e-92 341.7 250 71.6
unitig_21.g20017 Utricularia gibba HOM05D004157 ORTHO05D004860 7.1e-92 341.7 284 63.4
VMungo1309G1253 Vigna mungo HOM05D004157 ORTHO05D004860 7.1e-92 341.7 264 68.6
AT4G38800 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 9.3e-92 341.3 287 62.7
ClCG02G004360 Citrullus lanatus HOM05D000447 ORTHO05D000315 1.6e-91 340.5 261 70.5
Carub.0007s0065 Capsella rubella HOM05D004157 ORTHO05D004860 2.7e-91 339.7 285 62.8
DCAR_028937 Daucus carota HOM05D004157 ORTHO05D004860 3.5e-91 339.3 261 66.7
Lj9A389T64 Lonicera japonica HOM05D004157 ORTHO05D004860 6.0e-91 338.6 236 74.2
THA.LOC104819635 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 5.1e-90 335.5 274 62.4
Hund00051 Selenicereus undatus HOM05D004157 ORTHO05D004860 6.6e-90 335.1 213 79.3
Glyma.06G005700 Glycine max HOM05D004157 ORTHO05D004860 1.1e-89 334.3 264 65.5
Sp7g32610 Schrenkiella parvula HOM05D004157 ORTHO05D004860 1.5e-89 334.0 270 63.0
Aa31LG2G15700 Aethionema arabicum HOM05D004157 ORTHO05D004860 2.5e-89 333.2 275 62.5
CARHR247930 Cardamine hirsuta HOM05D004157 ORTHO05D004860 2.5e-89 333.2 268 63.4
Thhalv10026821m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 2.5e-89 333.2 275 62.2
Actinidia27843 Actinidia chinensis HOM05D004157 ORTHO05D004860 9.6e-89 331.3 271 69.4
BcaC01g00256 Brassica carinata HOM05D004157 ORTHO05D004860 1.6e-88 330.5 261 64.4
Zm00001eb036610 Zea mays HOM05D004157 ORTHO05D004860 3.6e-88 329.3 263 65.4
BcaB03g12226 Brassica carinata HOM05D004157 ORTHO05D004860 1.4e-87 327.4 261 63.6
AL7G16370 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 1.8e-87 327.0 270 60.4
ATR0095G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 3.1e-87 326.2 213 75.6
A08p16520 Brassica napus HOM05D004157 ORTHO05D004860 3.1e-87 326.2 275 60.4
ATR0089G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 4.0e-87 325.9 213 75.6
AUR62010110 Chenopodium quinoa HOM05D004157 ORTHO05D004860 4.0e-87 325.9 352 54.3
Aa31LG6G16410 Aethionema arabicum HOM05D004157 ORTHO05D004860 5.3e-87 325.5 306 57.5
C03p77330 Brassica napus HOM05D004157 ORTHO05D004860 5.3e-87 325.5 302 58.3
BraA08t34357Z Brassica rapa HOM05D004157 ORTHO05D004860 1.2e-86 324.3 283 60.1
Oeu002957.1 Olea europaea HOM05D004157 ORTHO05D004860 1.2e-86 324.3 213 77.0
A08p24000 Brassica napus HOM05D004157 ORTHO05D004860 2.0e-86 323.6 270 62.2
Carub.0007s0546 Capsella rubella HOM05D004157 ORTHO05D004860 2.6e-86 323.2 270 58.9
BcaC01g00866 Brassica carinata HOM05D004157 ORTHO05D004860 3.4e-86 322.8 275 59.6
BolC3t20826H Brassica oleracea HOM05D004157 ORTHO05D004860 4.5e-86 322.4 278 59.4
BolC3t19986H Brassica oleracea HOM05D004157 ORTHO05D004860 5.8e-86 322.0 275 61.1
Phvul.009G000700 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 5.8e-86 322.0 288 61.8
Duzib052G0280 Durio zibethinus HOM05D004157 ORTHO05D004860 7.6e-86 321.6 282 63.5
SHI05673 Sapria himalayana HOM05D004157 ORTHO05D004860 1.3e-85 320.9 226 70.8
CARHR243130 Cardamine hirsuta HOM05D004157 ORTHO05D004860 3.8e-85 319.3 263 61.2
C03p85360 Brassica napus HOM05D004157 ORTHO05D004860 4.9e-85 318.9 275 58.9
BcaB03g11807 Brassica carinata HOM05D004157 ORTHO05D004860 8.4e-85 318.2 275 58.9
Rhsim05G0063700 Rhododendron simsii HOM05D004157 ORTHO05D004860 7.1e-84 315.1 196 86.2
Duzib132G0743 Durio zibethinus HOM05D004157 ORTHO05D004860 9.3e-84 314.7 282 61.7
HanXRQChr11g0346651 Helianthus annuus HOM05D004157 ORTHO05D004860 1.1e-81 307.8 263 60.8
Ciclev10029225m.g Citrus clementina HOM05D004157 ORTHO05D004860 2.5e-81 306.6 260 64.6
Zm00001eb175180 Zea mays HOM05D004157 ORTHO05D004860 3.3e-81 306.2 263 62.7
Rhsim11G0186900 Rhododendron simsii HOM05D004157 ORTHO05D004860 9.6e-81 304.7 206 74.8
Prupe.8G159500 Prunus persica HOM05D004157 ORTHO05D004860 1.6e-80 303.9 291 58.1
Sp7g37020 Schrenkiella parvula HOM05D004157 ORTHO05D004860 3.7e-80 302.8 282 58.5
SGA_v2.0_scaffold32G13240 Striga asiatica HOM05D004157 ORTHO05D004860 4.0e-79 299.3 281 58.7
CDE02G2528 Ceratophyllum demersum HOM05D004157 ORTHO05D004860 6.9e-79 298.5 286 58.7
AT4G34840 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 9.0e-79 298.1 202 69.8
vmacro22693 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 1.2e-78 297.7 321 54.2
Cpa.g.sc37.201 Carica papaya HOM05D004157 ORTHO05D004860 1.1e-76 291.2 287 57.8
Lsat_1_v5_gn_1_62181 Lactuca sativa HOM05D004157 ORTHO05D004860 6.0e-75 285.4 261 56.7
AUR62013103 Chenopodium quinoa HOM05D004157 ORTHO05D004860 1.8e-74 283.9 184 78.3
PGR042G3985 Punica granatum HOM05D004157 ORTHO05D004860 2.3e-74 283.5 213 69.0
Eucgr.G01750 Eucalyptus grandis HOM05D004157 ORTHO05D004860 3.9e-74 282.7 264 57.2
Potri.009G128700 Populus trichocarpa HOM05D004157 ORTHO05D004860 1.1e-73 281.2 217 68.7
Pp3c14_1450 Physcomitrium patens HOM05D004157 ORTHO05D004860 1.3e-72 277.7 267 54.7
Pp3c1_20870 Physcomitrium patens HOM05D004157 ORTHO05D004860 2.8e-72 276.6 261 54.0
Pp3c26_5320 Physcomitrium patens HOM05D004157 ORTHO05D004860 3.5e-67 259.6 249 54.2
Mapoly0026s0093 Marchantia polymorpha HOM05D004157 ORTHO05D004860 1.6e-64 250.8 281 48.8
PGR042G2276 Punica granatum HOM05D004157 ORTHO05D004860 1.1e-63 248.1 282 52.5
SEGI_37242 Sequoiadendron giganteum HOM05D004157 ORTHO05D004860 7.6e-62 241.9 216 58.8
AagrBONN_evm.TU.Sc2ySwM_368.2286 Anthoceros agrestis HOM05D004157 ORTHO05D004860 1.0e-61 241.5 263 49.0
BraA08t33620Z Brassica rapa HOM05D004157 ORTHO05D004860 1.3e-61 241.1 209 59.8
SMO147G0350 Selaginella moellendorffii HOM05D004157 ORTHO05D004860 6.5e-61 238.8 268 47.4
vmacro02237 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 2.1e-59 233.8 207 64.3
Dinv04975 Davidia involucrata HOM05D000600 ORTHO05D000432 1.3e-58 231.1 155 77.4
Nitab4.5_0000980g0360 Nicotiana tabacum HOM05D004157 ORTHO05D004860 8.8e-58 228.4 147 79.6
Rhsim11G0185600 Rhododendron simsii HOM05D004157 ORTHO05D004860 1.7e-56 224.2 187 65.2
Cre03.g162550 Chlamydomonas reinhardtii HOM05D004157 ORTHO05D004860 3.0e-50 203.4 250 44.0
Rhsim11G0186700 Rhododendron simsii HOM05D004157 ORTHO05D004860 5.1e-50 202.6 166 66.3
MCO15G557 Micromonas commoda HOM05D004157 ORTHO05D004860 9.7e-49 198.4 260 43.8
SalBow3G1540 Salvia bowleyana HOM05D004157 ORTHO05D004860 1.2e-38 164.9 122 70.5
Eucgr.L03396 Eucalyptus grandis HOM05D004157 ORTHO05D004860 2.6e-38 163.7 92 83.7
MBI09_g11914_MAGBIO Magnolia biondii HOM05D004157 ORTHO05D004860 1.5e-36 157.9 105 77.1
Hma1.2p1_0032F.1_g019710 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 6.1e-35 152.5 148 60.1
TAR625G0759 Trochodendron aralioides HOM05D004157 ORTHO05D004860 3.0e-34 150.2 100 79.0
Haze_02206 Corylus avellana HOM05D000447 ORTHO05D000315 9.4e-28 128.6 100 70.0
C07p63580 Brassica napus HOM05D004157 ORTHO05D004860 2.7e-27 127.1 118 56.8
BolC7t46771H Brassica oleracea HOM05D004157 ORTHO05D004860 2.7e-27 127.1 118 56.8
TAR625G0858 Trochodendron aralioides HOM05D004157 ORTHO05D004860 9.8e-25 118.6 177 45.2
PRCOL_00006969 Prasinoderma coloniale HOM05D004157 ORTHO05D004860 2.8e-24 117.1 258 32.6
SalBow3G3146 Salvia bowleyana HOM05D004157 ORTHO05D004860 5.4e-23 112.8 86 67.4
arahy.Tifrunner.gnm1.ann1.R1P6K1 Arachis hypogaea HOM05D004157 ORTHO05D004860 5.9e-22 109.4 153 43.8
Medtr0173s0020 Medicago truncatula HOM05D004157 ORTHO05D004860 3.8e-21 106.7 82 67.1
Glyma.04G006001 Glycine max HOM05D004157 ORTHO05D004860 1.6e-19 101.3 66 74.2
Rhsim01G0041000 Rhododendron simsii HOM05D004157 ORTHO05D004860 4.7e-19 99.8 65 78.5
vmacro02118 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 7.5e-17 92.4 68 67.6
Aqoxy6G02338 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 5.9e-14 82.8 85 55.3
CBR_g20180 Chara braunii HOM05D004157 ORTHO05D004860 5.6e-12 76.3 99 42.4
Rhsim05G0183600 Rhododendron simsii HOM05D000190 ORTHO05D000113 1.1e-07 62.0 35 88.6
Rhsim11G0185500 Rhododendron simsii HOM05D004157 ORTHO05D004860 4.6e-06 56.6 31 71.0
HPP92_002565 Vanilla planifolia HOM05D004157 ORTHO05D004860 6.0e-06 56.2 123 37.4


User provided reference genes

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