Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17341 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 1.0e-128 463.4 229 100.0
Rhsim02G0114000 Rhododendron simsii HOM05D007279 ORTHO05D009212 4.6e-97 358.2 225 81.8
Rhsim02G0113400 Rhododendron simsii HOM05D007279 ORTHO05D009212 1.4e-90 336.7 226 77.9
Rhsim02G0113900 Rhododendron simsii HOM05D007279 ORTHO05D009212 5.1e-88 328.2 220 78.6
CSS0035764 Camellia sinensis var. sinensis HOM05D007279 ORTHO05D009212 3.8e-83 312.0 227 69.2
Dinv27265 Davidia involucrata HOM05D007279 ORTHO05D009212 3.5e-76 288.9 229 67.7
QL09p032239 Quercus lobata HOM05D007279 ORTHO05D009212 3.3e-71 272.3 224 63.8
Duzib093G1369 Durio zibethinus HOM05D007279 ORTHO05D009212 9.7e-71 270.8 225 64.9
Hma1.2p1_0880F.1_g231840 Hydrangea macrophylla HOM05D007279 ORTHO05D009212 9.7e-71 270.8 229 63.8
vmacro17338 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 9.1e-69 264.2 174 80.5
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 1.2e-68 263.8 206 67.0
Lsat_1_v5_gn_1_7161 Lactuca sativa HOM05D007279 ORTHO05D009212 1.6e-68 263.5 229 62.9
COL.COLO4_33390 Corchorus olitorius HOM05D007279 ORTHO05D009212 2.2e-67 259.6 225 63.6
MELO3C012712.2 Cucumis melo HOM05D007279 ORTHO05D009212 2.2e-67 259.6 221 63.8
Gohir.D03G063100 Gossypium hirsutum HOM05D007279 ORTHO05D009212 2.9e-67 259.2 224 64.3
Gorai.013G108300 Gossypium raimondii HOM05D007279 ORTHO05D009212 2.9e-67 259.2 224 64.3
arahy.Tifrunner.gnm1.ann1.03R76N Arachis hypogaea HOM05D007279 ORTHO05D009212 1.9e-66 256.5 228 61.0
arahy.Tifrunner.gnm1.ann1.G5JU44 Arachis hypogaea HOM05D007279 ORTHO05D009212 1.9e-66 256.5 228 61.0
Prupe.1G488900 Prunus persica HOM05D007279 ORTHO05D009212 1.9e-66 256.5 224 61.6
Cc10_g13680 Coffea canephora HOM05D007279 ORTHO05D009212 2.5e-66 256.1 227 61.2
TWI34G0215 Tripterygium wilfordii HOM05D007279 ORTHO05D009212 2.5e-66 256.1 215 64.7
Gohir.A02G110900 Gossypium hirsutum HOM05D007279 ORTHO05D009212 4.2e-66 255.4 224 62.9
Manes.02G169000 Manihot esculenta HOM05D007279 ORTHO05D009212 4.2e-66 255.4 223 63.2
CsaV3_7G022180 Cucumis sativus L. HOM05D007279 ORTHO05D009212 5.5e-66 255.0 221 62.4
Glyma.06G118000 Glycine max HOM05D007279 ORTHO05D009212 7.2e-66 254.6 226 61.5
MSTRG.1407 Avicennia marina HOM05D007279 ORTHO05D009212 2.1e-65 253.1 229 62.9
Cfa018422 Carpinus fangiana HOM05D007279 ORTHO05D009212 2.1e-65 253.1 220 63.6
FvH4_2g27960 Fragaria vesca HOM05D007279 ORTHO05D009212 2.1e-65 253.1 223 61.9
GSVIVG01008801001 Vitis vinifera HOM05D007279 ORTHO05D009212 2.1e-65 253.1 225 63.6
PGR044G1698 Punica granatum HOM05D007279 ORTHO05D009212 2.7e-65 252.7 233 60.9
HanXRQChr02g0045151 Helianthus annuus HOM05D007279 ORTHO05D009212 4.7e-65 251.9 233 60.9
FAN24G0438 Fragaria x ananassa HOM05D007279 ORTHO05D009212 6.1e-65 251.5 223 61.9
Potri.005G183000 Populus trichocarpa HOM05D007279 ORTHO05D009212 6.1e-65 251.5 224 62.9
RcHm_v2.0_Chr6g0296781 Rosa chinensis HOM05D007279 ORTHO05D009212 6.1e-65 251.5 224 61.2
Nitab4.5_0000317g0110 Nicotiana tabacum HOM05D007279 ORTHO05D009212 8.0e-65 251.1 228 61.4
CANSAT25G0430 Cannabis sativa HOM05D007279 ORTHO05D009212 1.0e-64 250.8 227 59.9
FAN27G1298 Fragaria x ananassa HOM05D007279 ORTHO05D009212 1.0e-64 250.8 223 61.4
Atru.chr13.1590 Acer truncatum HOM05D007279 ORTHO05D009212 1.4e-64 250.4 226 61.1
Glyma.04G245200 Glycine max HOM05D007279 ORTHO05D009212 1.4e-64 250.4 226 59.3
FAN20G2640 Fragaria x ananassa HOM05D007279 ORTHO05D009212 1.8e-64 250.0 222 61.3
Lj1g0002247 Lotus japonicus HOM05D007279 ORTHO05D009212 1.8e-64 250.0 215 63.3
ClCG09G021820 Citrullus lanatus HOM05D007279 ORTHO05D009212 2.3e-64 249.6 220 60.5
MD15G1133300 Malus domestica HOM05D007279 ORTHO05D009212 2.3e-64 249.6 218 61.0
Lalb_Chr08g0241031 Lupinus albus HOM05D007279 ORTHO05D009212 4.0e-64 248.8 217 62.7
Medtr3g088645 Medicago truncatula HOM05D007279 ORTHO05D009212 5.2e-64 248.4 225 58.7
Psat5g084400 Pisum sativum HOM05D007279 ORTHO05D009212 1.5e-63 246.9 224 59.8
Sed0026443 Sechium edule HOM05D007279 ORTHO05D009212 5.7e-63 245.0 222 59.9
Lj4A679T22 Lonicera japonica HOM05D007279 ORTHO05D009212 7.5e-63 244.6 217 60.4
Nitab4.5_0003485g0020 Nicotiana tabacum HOM05D007279 ORTHO05D009212 7.5e-63 244.6 228 61.0
Peaxi162Scf00066g00422 Petunia axillaris HOM05D007279 ORTHO05D009212 7.5e-63 244.6 228 60.5
Ca_16613_v3 Cicer arietinum L. HOM05D007279 ORTHO05D009212 9.7e-63 244.2 216 62.0
Sabra05G0138700 Salix brachista HOM05D007279 ORTHO05D009212 9.7e-63 244.2 225 62.2
Lj4A677T28 Lonicera japonica HOM05D007279 ORTHO05D009212 1.3e-62 243.8 217 60.4
CiPaw.16G022500 Carya illinoinensis HOM05D007279 ORTHO05D009212 2.2e-62 243.0 223 60.5
CAN.G405.7 Capsicum annuum HOM05D007279 ORTHO05D009212 6.3e-62 241.5 228 59.6
THA.LOC104808254 Tarenaya hassleriana HOM05D007279 ORTHO05D009212 8.3e-62 241.1 219 59.4
Solyc04g057980.3 Solanum lycopersicum HOM05D007279 ORTHO05D009212 1.4e-61 240.4 228 60.1
Eucgr.F03852 Eucalyptus grandis HOM05D007279 ORTHO05D009212 1.8e-61 240.0 234 59.8
Phvul.009G130400 Phaseolus vulgaris HOM05D007279 ORTHO05D009212 2.4e-61 239.6 215 62.8
VMungo1309G2060 Vigna mungo HOM05D007279 ORTHO05D009212 2.4e-61 239.6 214 62.6
PGSC0003DMG400025319 Solanum tuberosum HOM05D007279 ORTHO05D009212 4.1e-61 238.8 228 59.6
Migut.C01071 Erythranthe guttata HOM05D007279 ORTHO05D009212 7.0e-61 238.0 229 60.3
vmacro17312 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 9.1e-61 237.7 143 85.3
Sopen04g025840 Solanum pennellii HOM05D007279 ORTHO05D009212 2.7e-60 236.1 228 59.2
ECA247G0566 Erigeron canadensis HOM05D000006 ORTHO05D000001 5.9e-60 235.0 158 72.8
CARHR246340 Cardamine hirsuta HOM05D007279 ORTHO05D009212 1.3e-59 233.8 230 57.8
AT4G37925 Arabidopsis thaliana HOM05D007279 ORTHO05D009212 1.7e-59 233.4 230 58.3
Carub.0007s0229 Capsella rubella HOM05D007279 ORTHO05D009212 6.5e-59 231.5 230 57.8
AUR62007704 Chenopodium quinoa HOM05D007279 ORTHO05D009212 6.5e-59 231.5 221 57.5
TAR628G0029 Trochodendron aralioides HOM05D007279 ORTHO05D009212 6.5e-59 231.5 224 59.4
AL7G12720 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 1.1e-58 230.7 230 57.8
AUR62013436 Chenopodium quinoa HOM05D007279 ORTHO05D009212 1.1e-58 230.7 221 57.5
Thhalv10026209m.g Eutrema salsugineum HOM05D007279 ORTHO05D009212 2.5e-58 229.6 223 57.8
Sabra02G0061000 Salix brachista HOM05D007279 ORTHO05D009212 2.1e-57 226.5 202 60.9
EL10Ac1g01365 Beta vulgaris HOM05D007279 ORTHO05D009212 2.7e-57 226.1 218 56.9
unitig_46.g18082 Utricularia gibba HOM05D007279 ORTHO05D009212 2.7e-57 226.1 209 58.4
Ah.05g169060 Amaranthus hybridus HOM05D007279 ORTHO05D009212 6.1e-57 224.9 196 62.2
BcaB03g12324 Brassica carinata HOM05D007279 ORTHO05D009212 1.0e-56 224.2 220 57.3
BcaC01g00366 Brassica carinata HOM05D007279 ORTHO05D009212 1.4e-56 223.8 232 55.6
C03p78920 Brassica napus HOM05D007279 ORTHO05D009212 1.4e-56 223.8 232 55.6
BolC3t20136H Brassica oleracea HOM05D007279 ORTHO05D009212 1.4e-56 223.8 232 55.6
Sp7g35570 Schrenkiella parvula HOM05D007279 ORTHO05D009212 1.4e-56 223.8 229 56.8
Ciclev10002484m.g Citrus clementina HOM05D007279 ORTHO05D009212 1.8e-56 223.4 227 56.8
PSO170G3576 Papaver somniferum HOM05D007279 ORTHO05D009212 1.8e-56 223.4 219 55.3
PSO528G0084 Papaver somniferum HOM05D007279 ORTHO05D009212 2.3e-56 223.0 219 54.8
A08p22940 Brassica napus HOM05D007279 ORTHO05D009212 4.0e-56 222.2 220 57.3
Nn5g28445 Nelumbo nucifera HOM05D007279 ORTHO05D009212 5.2e-56 221.9 226 58.0
Aqoxy6G00304 Aquilegia oxysepala HOM05D007279 ORTHO05D009212 6.8e-56 221.5 218 58.7
Aa31LG6G14860 Aethionema arabicum HOM05D007279 ORTHO05D009212 1.2e-55 220.7 217 59.0
BraA08t34256Z Brassica rapa HOM05D007279 ORTHO05D009212 1.2e-55 220.7 220 56.8
DCAR_016660 Daucus carota HOM05D007279 ORTHO05D009212 7.5e-55 218.0 218 57.8
MBI03_g13490_MAGBIO Magnolia biondii HOM05D007279 ORTHO05D009212 2.4e-53 213.0 143 72.0
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 7.7e-52 208.0 223 55.2
ATR0681G064 Amborella trichopoda HOM05D007279 ORTHO05D009212 6.6e-51 204.9 133 72.2
Os04g0539000 Oryza sativa ssp. japonica HOM05D007279 ORTHO05D009212 1.9e-50 203.4 154 66.9
Zm00001eb075370 Zea mays HOM05D007279 ORTHO05D009212 2.5e-50 203.0 184 58.7
SEGI_28724 Sequoiadendron giganteum HOM05D007279 ORTHO05D009212 5.4e-45 185.3 140 65.0
Potri.002G077600 Populus trichocarpa HOM05D007279 ORTHO05D009212 1.6e-44 183.7 187 56.7
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 2.7e-44 183.0 167 58.7
Pp3c1_14910 Physcomitrium patens HOM05D007279 ORTHO05D009212 2.5e-42 176.4 158 57.0
Thecc.08G133700 Theobroma cacao HOM05D007279 ORTHO05D009212 9.8e-39 164.5 156 60.3
CBR_g26037 Chara braunii HOM05D007279 ORTHO05D009212 1.3e-38 164.1 138 58.7
SMO339G0044 Selaginella moellendorffii HOM05D007279 ORTHO05D009212 2.2e-38 163.3 138 59.4
AL3G19570 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 2.7e-36 156.4 109 72.5
Mapoly0063s0013 Marchantia polymorpha HOM05D007279 ORTHO05D009212 2.3e-35 153.3 160 50.0
TPR.G6347 Trifolium pratense HOM05D007279 ORTHO05D009212 1.9e-34 150.2 101 72.3
AagrBONN_evm.TU.Sc2ySwM_344.1177 Anthoceros agrestis HOM05D007279 ORTHO05D009212 6.2e-33 145.2 131 55.0
TAR623G1519 Trochodendron aralioides HOM05D007279 ORTHO05D009212 8.6e-27 124.8 118 53.4
SalBow7G1271 Salvia bowleyana HOM05D007279 ORTHO05D009212 1.2e-25 120.9 199 40.7
Zm00001eb427570 Zea mays HOM05D007279 ORTHO05D009212 6.4e-22 108.6 97 60.8
Oeu047171.1 Olea europaea HOM05D004195 ORTHO05D005309 1.4e-13 80.9 140 42.9


User provided reference genes

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