Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17311 Vaccinium macrocarpon HOM05D005879 ORTHO05D007432 2.2e-239 832.0 461 100.0
vmacro12962 Vaccinium macrocarpon HOM05D005879 ORTHO05D007432 5.8e-139 498.4 323 83.6
Rhsim01G0133800 Rhododendron simsii HOM05D005879 ORTHO05D007432 1.1e-113 414.5 324 70.4
RhsimUnG0233600 Rhododendron simsii HOM05D005879 ORTHO05D007432 1.1e-113 414.5 324 70.4
Dinv21896 Davidia involucrata HOM05D005879 ORTHO05D007432 4.6e-104 382.5 324 62.7
Hma1.2p1_0308F.1_g120270 Hydrangea macrophylla HOM05D005879 ORTHO05D007432 1.7e-98 364.0 324 61.1
Medtr8g090180 Medicago truncatula HOM05D005879 ORTHO05D007432 1.7e-90 337.4 322 56.2
Lj4g0026645 Lotus japonicus HOM05D005879 ORTHO05D007432 1.2e-88 331.3 328 54.6
DCAR_003483 Daucus carota HOM05D005879 ORTHO05D007432 1.3e-87 327.8 331 54.4
Haze_24910 Corylus avellana HOM05D005879 ORTHO05D007432 3.9e-87 326.2 326 54.6
Haze_24914 Corylus avellana HOM05D005879 ORTHO05D007432 3.9e-87 326.2 326 54.6
QL06p049237 Quercus lobata HOM05D005879 ORTHO05D007432 3.9e-87 326.2 329 53.5
TAR381G0927 Trochodendron aralioides HOM05D005879 ORTHO05D007432 3.9e-87 326.2 346 51.2
PSO339G2019 Papaver somniferum HOM05D005879 ORTHO05D007432 1.1e-86 324.7 326 51.8
PSO801G0022 Papaver somniferum HOM05D005879 ORTHO05D007432 1.9e-86 323.9 326 51.5
Cfa017077 Carpinus fangiana HOM05D005879 ORTHO05D007432 2.5e-86 323.6 323 54.8
CiPaw.03G142700 Carya illinoinensis HOM05D005879 ORTHO05D007432 2.5e-86 323.6 329 54.1
PGSC0003DMG400027189 Solanum tuberosum HOM05D005879 ORTHO05D007432 2.5e-86 323.6 325 53.8
Prupe.6G188100 Prunus persica HOM05D005879 ORTHO05D007432 4.3e-86 322.8 324 52.8
TPR.G6200 Trifolium pratense HOM05D005879 ORTHO05D007432 5.7e-86 322.4 356 50.3
Sopen05g031350 Solanum pennellii HOM05D005879 ORTHO05D007432 7.4e-86 322.0 325 53.5
Ca_17743_v3 Cicer arietinum L. HOM05D005879 ORTHO05D007432 1.3e-85 321.2 328 52.4
Solyc05g052840.1 Solanum lycopersicum HOM05D005879 ORTHO05D007432 1.3e-85 321.2 321 54.2
Cc07_g15080 Coffea canephora HOM05D005879 ORTHO05D007432 2.2e-85 320.5 387 47.8
Peaxi162Scf00054g00186 Petunia axillaris HOM05D005879 ORTHO05D007432 2.8e-85 320.1 327 53.5
Glyma.08G134800 Glycine max HOM05D005879 ORTHO05D007432 3.7e-85 319.7 322 53.7
Nn2g14007 Nelumbo nucifera HOM05D005879 ORTHO05D007432 1.8e-84 317.4 350 48.6
Cpa.g.sc615.1 Carica papaya HOM05D005879 ORTHO05D007432 3.1e-84 316.6 321 51.7
ECA233G0618 Erigeron canadensis HOM05D005879 ORTHO05D007432 3.1e-84 316.6 296 54.4
CAN.G151.26 Capsicum annuum HOM05D005879 ORTHO05D007432 2.0e-83 313.9 325 52.3
Manes.12G134100 Manihot esculenta HOM05D005879 ORTHO05D007432 2.0e-83 313.9 312 52.9
VMungo0251G0721 Vigna mungo HOM05D005879 ORTHO05D007432 1.3e-82 311.2 325 52.9
FAN26G1261 Fragaria x ananassa HOM05D005879 ORTHO05D007432 2.9e-82 310.1 322 52.8
Ah.11g050680 Amaranthus hybridus HOM05D005879 ORTHO05D007432 3.8e-82 309.7 328 51.5
CARHR246770 Cardamine hirsuta HOM05D005879 ORTHO05D007432 5.0e-82 309.3 319 52.4
MD05G1043000 Malus domestica HOM05D005879 ORTHO05D007432 5.0e-82 309.3 324 52.5
THA.LOC104807688 Tarenaya hassleriana HOM05D005879 ORTHO05D007432 5.0e-82 309.3 322 51.6
Nitab4.5_0009581g0010 Nicotiana tabacum HOM05D005879 ORTHO05D007432 8.5e-82 308.5 406 45.8
RcHm_v2.0_Chr2g0113151 Rosa chinensis HOM05D005879 ORTHO05D007432 8.5e-82 308.5 322 52.5
FvH4_1g20700 Fragaria vesca HOM05D005879 ORTHO05D007432 1.1e-81 308.1 313 53.4
Lalb_Chr06g0163471 Lupinus albus HOM05D005879 ORTHO05D007432 1.1e-81 308.1 377 48.3
HanXRQChr17g0554861 Helianthus annuus HOM05D005879 ORTHO05D007432 1.4e-81 307.8 411 45.3
Duzib147G1529 Durio zibethinus HOM05D005879 ORTHO05D007432 2.5e-81 307.0 295 54.6
MBI05_g37046_MAGBIO Magnolia biondii HOM05D005879 ORTHO05D007432 2.5e-81 307.0 345 47.5
TWI77G0137 Tripterygium wilfordii HOM05D005879 ORTHO05D007432 2.5e-81 307.0 321 52.0
Aqoxy3G00238 Aquilegia oxysepala HOM05D005879 ORTHO05D007432 3.2e-81 306.6 327 49.2
Phvul.002G256800 Phaseolus vulgaris HOM05D005879 ORTHO05D007432 4.2e-81 306.2 325 52.3
Ciclev10020973m.g Citrus clementina HOM05D005879 ORTHO05D007432 7.2e-81 305.4 299 54.5
PSO170G2230 Papaver somniferum HOM05D005879 ORTHO05D007432 7.2e-81 305.4 318 50.3
Aa31LG6G15340 Aethionema arabicum HOM05D005879 ORTHO05D007432 9.4e-81 305.1 317 49.5
Atru.chr7.1487 Acer truncatum HOM05D005879 ORTHO05D007432 1.2e-80 304.7 298 53.4
AL7G12180 Arabidopsis lyrata HOM05D005879 ORTHO05D007432 1.2e-80 304.7 320 52.2
COL.COLO4_27255 Corchorus olitorius HOM05D005879 ORTHO05D007432 1.2e-80 304.7 323 53.3
Sc05g0001510 Simmondsia chinensis HOM05D005879 ORTHO05D007432 1.2e-80 304.7 326 51.2
arahy.Tifrunner.gnm1.ann1.Y76I0L Arachis hypogaea HOM05D005879 ORTHO05D007432 1.6e-80 304.3 314 51.9
Oeu032409.1 Olea europaea HOM05D005879 ORTHO05D007432 1.6e-80 304.3 330 51.5
AUR62028624 Chenopodium quinoa HOM05D005879 ORTHO05D007432 2.7e-80 303.5 298 52.3
Eucgr.B03900 Eucalyptus grandis HOM05D005879 ORTHO05D007432 3.6e-80 303.1 293 53.6
Gohir.A11G202400 Gossypium hirsutum HOM05D005879 ORTHO05D007432 4.6e-80 302.8 317 52.1
ClCG07G017360 Citrullus lanatus HOM05D005879 ORTHO05D007432 6.1e-80 302.4 328 50.3
Glyma.05G177800 Glycine max HOM05D005879 ORTHO05D007432 6.1e-80 302.4 300 54.7
TWI81G0999 Tripterygium wilfordii HOM05D005879 ORTHO05D007432 1.0e-79 301.6 326 50.9
Gohir.D11G220800 Gossypium hirsutum HOM05D005879 ORTHO05D007432 1.4e-79 301.2 315 52.1
Carub.0007s0187 Capsella rubella HOM05D005879 ORTHO05D007432 2.3e-79 300.4 323 49.5
PGR102G2441 Punica granatum HOM05D005879 ORTHO05D007432 3.0e-79 300.1 293 52.9
AUR62008049 Chenopodium quinoa HOM05D005879 ORTHO05D007432 3.9e-79 299.7 298 51.7
Gorai.007G237000 Gossypium raimondii HOM05D005879 ORTHO05D007432 3.9e-79 299.7 315 52.1
Thhalv10025595m.g Eutrema salsugineum HOM05D005879 ORTHO05D007432 8.8e-79 298.5 323 50.8
arahy.Tifrunner.gnm1.ann1.F9QSZL Arachis hypogaea HOM05D005879 ORTHO05D007432 1.5e-78 297.7 321 50.2
Sed0022481 Sechium edule HOM05D005879 ORTHO05D007432 1.5e-78 297.7 334 49.1
Thecc.01G100600 Theobroma cacao HOM05D005879 ORTHO05D007432 4.4e-78 296.2 291 53.3
MSTRG.3773 Avicennia marina HOM05D005879 ORTHO05D007432 5.7e-78 295.8 332 50.3
Migut.L00135 Erythranthe guttata HOM05D005879 ORTHO05D007432 5.7e-78 295.8 332 50.0
EL10Ac5g10569 Beta vulgaris HOM05D005879 ORTHO05D007432 1.3e-77 294.7 300 51.3
Sp7g35960 Schrenkiella parvula HOM05D005879 ORTHO05D007432 1.7e-77 294.3 320 50.0
CsaV3_4G004590 Cucumis sativus L. HOM05D005879 ORTHO05D007432 2.8e-77 293.5 328 49.4
CsaV3_UNG120970 Cucumis sativus L. HOM05D005879 ORTHO05D007432 2.8e-77 293.5 328 49.4
CsaV3_UNG160200 Cucumis sativus L. HOM05D005879 ORTHO05D007432 2.8e-77 293.5 328 49.4
CsaV3_UNG223580 Cucumis sativus L. HOM05D005879 ORTHO05D007432 2.8e-77 293.5 328 49.4
BolC7t46692H Brassica oleracea HOM05D005879 ORTHO05D007432 6.3e-77 292.4 321 49.2
C07p62780 Brassica napus HOM05D005879 ORTHO05D007432 1.1e-76 291.6 321 48.9
MELO3C017607.2 Cucumis melo HOM05D005879 ORTHO05D007432 1.1e-76 291.6 324 49.7
BraA03t15633Z Brassica rapa HOM05D005879 ORTHO05D007432 2.4e-76 290.4 318 49.1
AT4G39920 Arabidopsis thaliana HOM05D005879 ORTHO05D007432 3.1e-76 290.0 318 49.4
A03p65800 Brassica napus HOM05D005879 ORTHO05D007432 5.3e-76 289.3 318 48.7
Lsat_1_v5_gn_8_137181 Lactuca sativa HOM05D005879 ORTHO05D007432 9.1e-76 288.5 382 44.2
Potri.005G074700 Populus trichocarpa HOM05D005879 ORTHO05D007432 7.7e-75 285.4 368 45.1
Sabra05G0061500 Salix brachista HOM05D005879 ORTHO05D007432 6.5e-74 282.3 297 50.5
SGA_v2.0_scaffold115G32189 Striga asiatica HOM05D005879 ORTHO05D007432 6.5e-74 282.3 326 50.3
SalBow7G4497 Salvia bowleyana HOM05D005879 ORTHO05D007432 1.1e-73 281.6 329 49.5
SGA_v2.0_scaffold334G49051 Striga asiatica HOM05D005879 ORTHO05D007432 1.4e-73 281.2 326 50.3
unitig_32.g10701 Utricularia gibba HOM05D005879 ORTHO05D007432 4.2e-73 279.6 323 50.2
Hma1.2p1_0308F.1_g120280 Hydrangea macrophylla HOM05D005879 ORTHO05D007432 5.5e-73 279.3 160 80.6
ATR0584G053 Amborella trichopoda HOM05D005879 ORTHO05D007432 4.1e-68 263.1 305 46.6
FAN19G0980 Fragaria x ananassa HOM05D005879 ORTHO05D007432 7.0e-68 262.3 263 52.1
Zm00001eb243870 Zea mays HOM05D005879 ORTHO05D007432 1.5e-62 244.6 293 45.4
VMungo0540G1211 Vigna mungo HOM05D005879 ORTHO05D007432 3.1e-60 236.9 163 67.5
Os02g0557000 Oryza sativa ssp. japonica HOM05D005879 ORTHO05D007432 4.1e-60 236.5 314 43.0
Atru.chr11.1549 Acer truncatum HOM05D005879 ORTHO05D007432 9.1e-60 235.3 154 70.8
CDE04G0616 Ceratophyllum demersum HOM05D005879 ORTHO05D007432 9.1e-60 235.3 322 40.1
HPP92_013925 Vanilla planifolia HOM05D005879 ORTHO05D007432 1.2e-59 235.0 315 42.5
AagrBONN_evm.TU.Sc2ySwM_117.1918 Anthoceros agrestis HOM05D005879 ORTHO05D007432 3.0e-55 220.3 369 36.6
SMO143G0283 Selaginella moellendorffii HOM05D005879 ORTHO05D007432 5.7e-54 216.1 312 37.2
Pp3c13_2250 Physcomitrium patens HOM05D005879 ORTHO05D007432 1.1e-52 211.8 288 41.0
FAN23G0004 Fragaria x ananassa HOM05D005879 ORTHO05D007432 1.2e-51 208.4 132 71.2
Mapoly0002s0046 Marchantia polymorpha HOM05D005879 ORTHO05D007432 1.6e-51 208.0 290 42.1
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 3.8e-50 203.4 291 39.2
arahy.Tifrunner.gnm1.ann1.DH96WI Arachis hypogaea HOM05D005879 ORTHO05D007432 2.5e-49 200.7 289 41.9
SEGI_25682 Sequoiadendron giganteum HOM05D005879 ORTHO05D007432 1.8e-47 194.5 149 59.1
Potri.007G093800 Populus trichocarpa HOM05D005879 ORTHO05D007432 7.5e-46 189.1 162 54.3
Psat7g055120 Pisum sativum HOM05D005879 ORTHO05D007432 9.8e-46 188.7 160 58.1
MD01G1031400 Malus domestica HOM05D005879 ORTHO05D007432 4.1e-44 183.3 130 63.1
Actinidia28237 Actinidia chinensis HOM05D005879 ORTHO05D007432 2.0e-43 181.0 114 71.9
Atru.chr7.1491 Acer truncatum HOM05D005879 ORTHO05D007432 1.1e-36 158.7 206 44.2
MCO11G662 Micromonas commoda HOM05D005879 ORTHO05D007432 8.6e-34 149.1 292 32.2
PRCOL_00003435 Prasinoderma coloniale HOM05D005879 ORTHO05D007432 2.2e-29 134.4 293 30.0
BcaB03g12293 Brassica carinata HOM05D005879 ORTHO05D007432 4.1e-28 130.2 241 36.5
Migut.L00117 Erythranthe guttata HOM05D005879 ORTHO05D007432 4.1e-28 130.2 85 72.9
Cre03.g200150 Chlamydomonas reinhardtii HOM05D005879 ORTHO05D007432 1.6e-27 128.3 329 28.3
C03p78540 Brassica napus HOM05D005879 ORTHO05D007432 6.0e-27 126.3 301 33.6
Hma1.2p1_0297F.1_g117050 Hydrangea macrophylla HOM05D005879 ORTHO05D007432 7.3e-25 119.4 91 67.0
BraA08t34278Z Brassica rapa HOM05D005879 ORTHO05D007432 9.9e-22 109.0 77 66.2
MBI15_g14577_MAGBIO Magnolia biondii HOM05D005879 ORTHO05D007432 2.9e-21 107.5 69 65.2
BolC3t20106H Brassica oleracea HOM05D005879 ORTHO05D007432 1.9e-20 104.8 296 31.4
A08p23210 Brassica napus HOM05D005879 ORTHO05D007432 4.7e-16 90.1 60 65.0
BcaNung02300 Brassica carinata HOM05D005879 ORTHO05D007432 1.1e-15 89.0 90 55.6
HPP92_014012 Vanilla planifolia HOM05D005879 ORTHO05D007432 5.8e-14 83.2 221 30.8
GSVIVG01004856001 Vitis vinifera HOM05D005879 ORTHO05D007432 1.3e-13 82.0 59 67.8
SEGI_41531 Sequoiadendron giganteum HOM05D005879 ORTHO05D007432 3.9e-10 70.5 70 52.9
Cfa025806 Carpinus fangiana HOM05D005879 ORTHO05D123935 5.6e-09 66.6 122 29.5
Pp3c4_21480 Physcomitrium patens HOM05D005879 ORTHO05D007432 3.6e-08 63.9 58 58.6


User provided reference genes

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