Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17294 Vaccinium macrocarpon HOM05D006820 ORTHO05D008526 3.3e-127 458.4 229 100.0
CSS0042496 Camellia sinensis var. sinensis HOM05D006820 ORTHO05D008526 1.2e-105 386.7 229 85.2
Actinidia32013 Actinidia chinensis HOM05D006820 ORTHO05D008526 4.9e-99 364.8 229 82.1
Lj9A405G64 Lonicera japonica HOM05D006820 ORTHO05D008526 7.9e-97 357.5 229 77.7
Duzib132G0878 Durio zibethinus HOM05D006820 ORTHO05D008526 5.1e-96 354.8 229 75.5
GSVIVG01023895001 Vitis vinifera HOM05D006820 ORTHO05D008526 9.7e-95 350.5 229 75.5
Thecc.02G045600 Theobroma cacao HOM05D006820 ORTHO05D008526 2.8e-94 349.0 227 76.2
CANSAT25G2916 Cannabis sativa HOM05D006820 ORTHO05D008526 3.7e-94 348.6 228 73.7
Nn6g31730 Nelumbo nucifera HOM05D006820 ORTHO05D008526 4.8e-94 348.2 229 73.8
Manes.04G064800 Manihot esculenta HOM05D006820 ORTHO05D008526 1.4e-93 346.7 229 72.1
Gorai.008G040700 Gossypium raimondii HOM05D006820 ORTHO05D008526 1.8e-93 346.3 228 74.6
Ciclev10029216m.g Citrus clementina HOM05D006820 ORTHO05D008526 3.1e-93 345.5 228 74.6
Lsat_1_v5_gn_8_120400 Lactuca sativa HOM05D006820 ORTHO05D008526 6.9e-93 344.4 224 75.0
TWI79G0714 Tripterygium wilfordii HOM05D006820 ORTHO05D008526 2.2e-91 339.3 225 75.6
Nitab4.5_0011212g0060 Nicotiana tabacum HOM05D006820 ORTHO05D008526 2.9e-91 339.0 224 74.6
TAR625G0986 Trochodendron aralioides HOM05D006820 ORTHO05D008526 3.8e-91 338.6 229 74.2
DCAR_015665 Daucus carota HOM05D006820 ORTHO05D008526 6.5e-91 337.8 224 72.3
Sc18g0005950 Simmondsia chinensis HOM05D006820 ORTHO05D008526 6.5e-91 337.8 229 72.1
PGSC0003DMG400014660 Solanum tuberosum HOM05D006820 ORTHO05D008526 6.5e-91 337.8 225 74.2
Ah.01g007660 Amaranthus hybridus HOM05D006820 ORTHO05D008526 1.1e-90 337.0 228 71.1
QL11p053925 Quercus lobata HOM05D006820 ORTHO05D008526 2.5e-90 335.9 244 69.7
Solyc01g112160.4 Solanum lycopersicum HOM05D006820 ORTHO05D008526 3.2e-90 335.5 229 72.5
Sopen01g054210 Solanum pennellii HOM05D006820 ORTHO05D008526 4.2e-90 335.1 229 72.9
Peaxi162Scf00362g00246 Petunia axillaris HOM05D006820 ORTHO05D008526 1.6e-89 333.2 225 74.2
Potri.009G165400 Populus trichocarpa HOM05D006820 ORTHO05D008526 2.1e-89 332.8 221 74.2
CAN.G1725.10 Capsicum annuum HOM05D006820 ORTHO05D008526 3.6e-89 332.0 224 74.1
AUR62012929 Chenopodium quinoa HOM05D006820 ORTHO05D008526 3.0e-88 328.9 229 69.9
Migut.B00016 Erythranthe guttata HOM05D006820 ORTHO05D008526 3.9e-88 328.6 226 72.1
Haze_02054 Corylus avellana HOM05D006820 ORTHO05D008526 6.7e-88 327.8 250 65.6
HanXRQChr14g0459061 Helianthus annuus HOM05D006820 ORTHO05D008526 8.8e-88 327.4 229 73.8
Atru.chr5.3527 Acer truncatum HOM05D006820 ORTHO05D008526 1.5e-87 326.6 227 70.9
Aqoxy6G01707 Aquilegia oxysepala HOM05D006820 ORTHO05D008526 1.5e-87 326.6 227 71.8
EL10Ac9g21258 Beta vulgaris HOM05D006820 ORTHO05D008526 2.5e-87 325.9 231 69.7
CiPaw.06G118200 Carya illinoinensis HOM05D006820 ORTHO05D008526 2.5e-87 325.9 227 70.9
Prupe.8G177600 Prunus persica HOM05D006820 ORTHO05D008526 5.7e-87 324.7 227 72.2
LjContig00081g0000354 Lotus japonicus HOM05D006820 ORTHO05D008526 3.7e-86 322.0 221 72.4
AUR62011713 Chenopodium quinoa HOM05D006820 ORTHO05D008526 6.3e-86 321.2 228 68.9
ECA233G1752 Erigeron canadensis HOM05D006820 ORTHO05D008526 6.3e-86 321.2 209 75.1
MD10G1138800 Malus domestica HOM05D006820 ORTHO05D008526 6.3e-86 321.2 227 70.5
PGR142G1762 Punica granatum HOM05D006820 ORTHO05D008526 6.3e-86 321.2 228 67.5
PSO541G0178 Papaver somniferum HOM05D006820 ORTHO05D008526 8.2e-86 320.9 229 69.0
Glyma.14G001800 Glycine max HOM05D006820 ORTHO05D008526 1.8e-85 319.7 226 69.0
PSO675G9330 Papaver somniferum HOM05D006820 ORTHO05D008526 6.9e-85 317.8 229 68.6
FvH4_2g16540 Fragaria vesca HOM05D006820 ORTHO05D008526 1.2e-84 317.0 227 69.2
Phvul.008G291600 Phaseolus vulgaris HOM05D006820 ORTHO05D008526 2.0e-84 316.2 225 68.4
THA.LOC104804082 Tarenaya hassleriana HOM05D006820 ORTHO05D008526 2.0e-84 316.2 229 68.1
FAN15G1990 Fragaria x ananassa HOM05D006820 ORTHO05D008526 3.4e-84 315.5 227 69.2
BraA08t34377Z Brassica rapa HOM05D000807 ORTHO05D000662 4.5e-84 315.1 228 68.9
FAN24G1561 Fragaria x ananassa HOM05D006820 ORTHO05D008526 4.5e-84 315.1 225 68.9
SGA_v2.0_scaffold58G20319 Striga asiatica HOM05D006820 ORTHO05D008526 4.5e-84 315.1 233 69.5
Eucgr.I01511 Eucalyptus grandis HOM05D006820 ORTHO05D008526 1.0e-83 313.9 221 69.7
RcHm_v2.0_Chr6g0280561 Rosa chinensis HOM05D006820 ORTHO05D008526 1.0e-83 313.9 227 69.6
Hund06169 Selenicereus undatus HOM05D006820 ORTHO05D008526 1.7e-83 313.2 221 68.3
BolC3t19961H Brassica oleracea HOM05D000807 ORTHO05D000662 5.0e-83 311.6 228 68.0
FAN27G3410 Fragaria x ananassa HOM05D006820 ORTHO05D008526 5.0e-83 311.6 227 69.2
Aa31LG6G16790 Aethionema arabicum HOM05D006820 ORTHO05D008526 6.5e-83 311.2 229 67.7
BraA08t34346Z Brassica rapa HOM05D006820 ORTHO05D008526 8.5e-83 310.8 228 68.4
Sp7g37400 Schrenkiella parvula HOM05D006820 ORTHO05D008526 1.1e-82 310.5 228 67.5
BcaC01g00221 Brassica carinata HOM05D006820 ORTHO05D008526 2.5e-82 309.3 228 68.0
BcaC01g00229 Brassica carinata HOM05D006820 ORTHO05D008526 2.5e-82 309.3 228 67.1
Medtr5g099030 Medicago truncatula HOM05D006820 ORTHO05D008526 5.5e-82 308.1 223 68.2
VMungo0647G2489 Vigna mungo HOM05D006820 ORTHO05D008526 5.5e-82 308.1 225 67.1
TPR.G18648 Trifolium pratense HOM05D006820 ORTHO05D008526 9.4e-82 307.4 223 68.6
CARHR294110 Cardamine hirsuta HOM05D006820 ORTHO05D008526 2.1e-81 306.2 225 65.8
arahy.Tifrunner.gnm1.ann1.696HI2 Arachis hypogaea HOM05D006820 ORTHO05D008526 3.6e-81 305.4 222 68.9
arahy.Tifrunner.gnm1.ann1.6J1J15 Arachis hypogaea HOM05D006820 ORTHO05D008526 4.7e-81 305.1 222 69.4
CsaV3_5G012520 Cucumis sativus L. HOM05D006820 ORTHO05D008526 4.7e-81 305.1 230 66.1
RcHm_v2.0_Chr1g0329291 Rosa chinensis HOM05D006820 ORTHO05D008526 6.1e-81 304.7 228 69.3
Gohir.A12G033700 Gossypium hirsutum HOM05D006820 ORTHO05D008526 2.3e-80 302.8 227 66.5
Lalb_Chr10g0095311 Lupinus albus HOM05D006820 ORTHO05D008526 1.5e-79 300.1 221 67.0
FvH4_7g04340 Fragaria vesca HOM05D006820 ORTHO05D008526 2.0e-79 299.7 228 67.1
Carub.0007s0026 Capsella rubella HOM05D006820 ORTHO05D008526 4.4e-79 298.5 221 67.0
AL7G10240 Arabidopsis lyrata HOM05D006820 ORTHO05D008526 4.8e-78 295.0 228 64.9
Thhalv10004876m.g Eutrema salsugineum HOM05D006820 ORTHO05D008526 4.8e-78 295.0 228 64.5
AT4G38370 Arabidopsis thaliana HOM05D006820 ORTHO05D008526 6.3e-78 294.7 221 65.6
PSO017G7138 Papaver somniferum HOM05D006820 ORTHO05D008526 2.4e-77 292.7 229 63.3
ATR0661G540 Amborella trichopoda HOM05D006820 ORTHO05D008526 5.3e-77 291.6 226 64.2
CDE07G0154 Ceratophyllum demersum HOM05D006820 ORTHO05D008526 5.3e-77 291.6 222 64.4
FAN01G0447 Fragaria x ananassa HOM05D006820 ORTHO05D008526 1.2e-76 290.4 246 62.6
Rhsim05G0047800 Rhododendron simsii HOM05D006820 ORTHO05D008526 1.2e-76 290.4 238 68.9
PSO675G0855 Papaver somniferum HOM05D006820 ORTHO05D008526 1.5e-76 290.0 230 62.6
FAN03G3185 Fragaria x ananassa HOM05D006820 ORTHO05D008526 7.7e-76 287.7 247 61.9
RhsimUnG0142100 Rhododendron simsii HOM05D006820 ORTHO05D008526 1.0e-75 287.3 238 68.5
FAN06G4449 Fragaria x ananassa HOM05D006820 ORTHO05D008526 1.3e-75 287.0 246 61.8
unitig_0.g2740 Utricularia gibba HOM05D006820 ORTHO05D008526 8.5e-75 284.3 232 63.4
PSO541G2729 Papaver somniferum HOM05D006820 ORTHO05D008526 8.8e-72 274.2 230 60.0
Oeu021963.1 Olea europaea HOM05D006820 ORTHO05D008526 9.7e-71 270.8 222 65.3
Zm00001eb088270 Zea mays HOM05D006820 ORTHO05D008526 4.2e-66 255.4 239 55.6
SalBow1G3348 Salvia bowleyana HOM05D006820 ORTHO05D008526 1.2e-65 253.8 176 72.2
Gohir.D12G038800 Gossypium hirsutum HOM05D006820 ORTHO05D008526 3.6e-65 252.3 165 73.3
Dinv41882 Davidia involucrata HOM05D006820 ORTHO05D008526 1.5e-63 246.9 147 82.3
Os04g0224600 Oryza sativa ssp. japonica HOM05D006820 ORTHO05D008526 7.5e-63 244.6 223 56.1
Sed0016165 Sechium edule HOM05D006820 ORTHO05D008526 7.5e-63 244.6 171 68.4
MELO3C022591.2 Cucumis melo HOM05D006820 ORTHO05D008526 4.8e-62 241.9 165 70.9
ClCG02G009990 Citrullus lanatus HOM05D006820 ORTHO05D008526 5.9e-60 235.0 173 65.9
COL.COLO4_17938 Corchorus olitorius HOM05D006820 ORTHO05D008526 1.3e-59 233.8 165 70.3
Pp3c6_22700 Physcomitrium patens HOM05D006820 ORTHO05D008526 1.0e-56 224.2 225 54.2
Psat2g001280 Pisum sativum HOM05D006820 ORTHO05D008526 1.2e-55 220.7 159 66.7
PSO170G2156 Papaver somniferum HOM05D006820 ORTHO05D008526 1.5e-55 220.3 174 62.1
AagrBONN_evm.TU.Sc2ySwM_344.5004 Anthoceros agrestis HOM05D006820 ORTHO05D008526 8.3e-54 214.5 227 49.8
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 1.4e-53 213.8 223 50.2
Mapoly0119s0027 Marchantia polymorpha HOM05D006820 ORTHO05D008526 1.4e-53 213.8 221 51.1
HPP92_025502 Vanilla planifolia HOM05D006820 ORTHO05D008526 1.3e-51 207.2 170 62.9
SMO347G0521 Selaginella moellendorffii HOM05D006820 ORTHO05D008526 6.6e-51 204.9 221 52.0
HPP92_025534 Vanilla planifolia HOM05D006820 ORTHO05D008526 1.1e-50 204.1 170 62.4
C03p77090 Brassica napus HOM05D000564 ORTHO05D002780 2.8e-46 189.5 121 73.6
A08p24230 Brassica napus HOM05D000564 ORTHO05D002780 3.2e-45 186.0 121 71.1
CSS0041656 Camellia sinensis var. sinensis HOM05D006820 ORTHO05D008526 4.3e-42 175.6 117 78.6
arahy.Tifrunner.gnm1.ann1.MXMJ8X Arachis hypogaea HOM05D006820 ORTHO05D008526 1.6e-41 173.7 144 61.1
CBR_g8644 Chara braunii HOM05D006820 ORTHO05D008526 4.0e-40 169.1 251 41.0
Cc09_g10680 Coffea canephora HOM05D006820 ORTHO05D008526 3.7e-38 162.5 106 72.6
Cpa.g.sc20.200 Carica papaya HOM05D006820 ORTHO05D008526 3.2e-37 159.5 127 63.0
MD05G1133800 Malus domestica HOM05D006820 ORTHO05D008526 2.1e-33 146.7 146 56.8
MD10G1042800 Malus domestica HOM05D006820 ORTHO05D008526 8.9e-32 141.4 143 55.2
arahy.Tifrunner.gnm1.ann1.JU0VI1 Arachis hypogaea HOM05D006820 ORTHO05D008526 1.9e-26 123.6 108 61.1
Cre13.g564000 Chlamydomonas reinhardtii HOM05D006820 ORTHO05D008526 6.2e-25 118.6 223 35.9
A09p68760 Brassica napus HOM05D006820 ORTHO05D008526 4.7e-17 92.4 89 50.6
BraA09t42215Z Brassica rapa HOM05D006820 ORTHO05D008526 4.7e-17 92.4 89 50.6
AUR62010100 Chenopodium quinoa HOM05D000002 ORTHO05D000001 5.8e-15 85.5 167 37.1
Cc00_g33760 Coffea canephora HOM05D006820 ORTHO05D008526 1.1e-13 81.3 56 71.4
Cc09_g10670 Coffea canephora HOM05D006820 ORTHO05D008526 1.1e-13 81.3 56 71.4
arahy.Tifrunner.gnm1.ann1.E18LML Arachis hypogaea HOM05D006820 ORTHO05D008526 8.7e-11 71.6 47 72.3
ClCG02G010000 Citrullus lanatus HOM05D006820 ORTHO05D008526 7.6e-07 58.5 31 80.6


User provided reference genes

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