Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17288 Vaccinium macrocarpon HOM05D008860 ORTHO05D010619 1.2e-161 573.2 290 100.0
Rhsim06G0109600 Rhododendron simsii HOM05D002224 ORTHO05D002334 2.3e-32 143.7 214 37.4
CSS0028456 Camellia sinensis var. sinensis HOM05D002261 ORTHO05D002334 1.9e-31 140.6 175 40.6
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.4e-21 107.1 167 34.7
CSS0015794 Camellia sinensis var. sinensis HOM05D008336 ORTHO05D010619 1.4e-18 97.8 124 46.8
CANSAT01G1154 Cannabis sativa HOM05D000824 ORTHO05D010619 3.2e-18 96.7 173 28.9
Actinidia03272 Actinidia chinensis HOM05D006612 ORTHO05D010619 5.4e-18 95.9 175 28.0
Rhsim05G0088200 Rhododendron simsii HOM05D008336 ORTHO05D011831 1.6e-17 94.4 262 27.9
Atru.chr3.2966 Acer truncatum HOM05D008860 ORTHO05D010619 6.0e-17 92.4 176 26.1
Hma1.2p1_0500F.1_g166880 Hydrangea macrophylla HOM05D009267 ORTHO05D010384 1.7e-16 90.9 174 33.3
Rhsim08G0049800 Rhododendron simsii HOM05D023805 ORTHO05D010384 2.3e-16 90.5 122 36.9
Atru.chr4.2122 Acer truncatum HOM05D002751 ORTHO05D003005 5.6e-15 85.9 146 27.4
CiPaw.01G054700 Carya illinoinensis HOM05D009267 ORTHO05D010384 5.6e-15 85.9 149 32.9
Rhsim13G0142800 Rhododendron simsii HOM05D000684 ORTHO05D010619 4.8e-14 82.8 257 27.6
CANSAT80G1395 Cannabis sativa HOM05D008860 ORTHO05D010619 6.9e-13 79.0 167 28.1
Peaxi162Scf00111g00518 Petunia axillaris HOM05D002261 ORTHO05D002334 6.9e-13 79.0 234 27.4
CANSAT11G0110 Cannabis sativa HOM05D009267 ORTHO05D010384 9.0e-13 78.6 212 26.4
Dinv26739 Davidia involucrata HOM05D000824 ORTHO05D010384 2.0e-12 77.4 148 30.4
Hma1.2p1_2379F.1_g320940 Hydrangea macrophylla HOM05D009267 ORTHO05D010619 2.0e-12 77.4 130 33.1
Oeu030897.1 Olea europaea HOM05D008860 ORTHO05D010619 3.4e-12 76.6 240 23.8
Dinv08482 Davidia involucrata HOM05D000824 ORTHO05D010619 1.3e-11 74.7 237 24.5
Dinv05943 Davidia involucrata HOM05D006612 ORTHO05D010619 1.1e-10 71.6 231 23.8
Dinv08250 Davidia involucrata HOM05D000824 ORTHO05D010384 1.4e-10 71.2 255 25.9
CANSAT21G1209 Cannabis sativa HOM05D009267 ORTHO05D010384 2.4e-10 70.5 138 29.7
Peaxi162Scf00809g00418 Petunia axillaris HOM05D002261 ORTHO05D002334 3.2e-10 70.1 210 29.5
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.2e-10 69.7 159 28.3
Oeu032902.1 Olea europaea HOM05D008860 ORTHO05D010619 5.4e-10 69.3 166 25.3
Rhsim06G0109500 Rhododendron simsii HOM05D002224 ORTHO05D010619 9.3e-10 68.6 117 36.8
CANSAT25G2360 Cannabis sativa HOM05D009267 ORTHO05D010384 1.6e-09 67.8 232 24.6
Cc01_g08100 Coffea canephora HOM05D000096 ORTHO05D000045 1.6e-09 67.8 172 23.8
Oeu003462.1 Olea europaea HOM05D008860 ORTHO05D010619 1.6e-09 67.8 263 24.0
Dinv10520 Davidia involucrata HOM05D000824 ORTHO05D010384 2.7e-09 67.0 208 24.5
Peaxi162Scf00371g00312 Petunia axillaris HOM05D002261 ORTHO05D002334 3.5e-09 66.6 127 31.5
Atru.chr12.1651 Acer truncatum HOM05D000096 ORTHO05D000045 4.6e-09 66.2 133 24.8
Oeu029240.1 Olea europaea HOM05D008860 ORTHO05D010619 4.6e-09 66.2 323 21.1
CiPaw.15G116600 Carya illinoinensis HOM05D000096 ORTHO05D010384 6.0e-09 65.9 125 30.4
Rhsim08G0044600 Rhododendron simsii HOM05D008336 ORTHO05D011520 1.8e-08 64.3 172 25.6
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 6.7e-08 62.4 218 23.4
Peaxi162Scf00098g01535 Petunia axillaris HOM05D002261 ORTHO05D002334 6.7e-08 62.4 151 29.1
Peaxi162Scf00363g00012 Petunia axillaris HOM05D002261 ORTHO05D002334 1.1e-07 61.6 179 25.1
SGA_v2.0_scaffold90G27630 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-07 61.2 112 28.6
CARHR205160 Cardamine hirsuta HOM05D000824 ORTHO05D003555 1.9e-07 60.8 151 23.2
Rhsim03G0120000 Rhododendron simsii HOM05D008336 ORTHO05D011520 1.9e-07 60.8 108 33.3
AL6G18370 Arabidopsis lyrata HOM05D000824 ORTHO05D003555 2.5e-07 60.5 148 22.3
Dinv36352 Davidia involucrata HOM05D009267 ORTHO05D000302 5.6e-07 59.3 152 23.7
Peaxi162Scf01253g00018 Petunia axillaris HOM05D002261 ORTHO05D002334 5.6e-07 59.3 111 29.7
Oeu024002.2 Olea europaea HOM05D008860 ORTHO05D010619 1.3e-06 58.2 130 23.8
Peaxi162Scf00620g00218 Petunia axillaris HOM05D002261 ORTHO05D002334 1.3e-06 58.2 112 27.7
Sopen01g025680 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-06 57.8 109 27.5
Carub.0006s0691 Capsella rubella HOM05D000824 ORTHO05D003555 2.1e-06 57.4 302 18.9
Nitab4.5_0003349g0060 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.1e-06 57.4 108 30.6
Peaxi162Scf00951g00019 Petunia axillaris HOM05D002261 ORTHO05D002334 2.1e-06 57.4 112 27.7
AUR62033963 Chenopodium quinoa HOM05D003315 ORTHO05D003407 2.8e-06 57.0 175 25.1
Peaxi162Scf00164g00088 Petunia axillaris HOM05D002261 ORTHO05D002334 2.8e-06 57.0 213 26.3
Rhsim01G0070500 Rhododendron simsii HOM05D008336 ORTHO05D011520 3.7e-06 56.6 126 28.6
CiPaw.01G182600 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.8e-06 56.2 87 27.6
SGA_v2.0_scaffold181G39686 Striga asiatica HOM05D006612 ORTHO05D009014 8.1e-06 55.5 111 27.0


User provided reference genes

Program Settings