Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17239 Vaccinium macrocarpon HOM05D040504 ORTHO05D426804 1.0e-162 576.6 284 100.0
vmacro06566 Vaccinium macrocarpon HOM05D040504 ORTHO05D426616 8.5e-24 115.2 119 59.7
Rhsim05G0010600 Rhododendron simsii HOM05D004389 ORTHO05D005457 4.6e-22 109.4 155 48.4
TAR626G0408 Trochodendron aralioides HOM05D004389 ORTHO05D005457 1.0e-13 81.6 146 39.0
TAR383G0075 Trochodendron aralioides HOM05D004389 ORTHO05D005457 6.7e-13 79.0 160 37.5
CSS0010710 Camellia sinensis var. sinensis HOM05D004389 ORTHO05D005457 8.8e-13 78.6 146 36.3
GSVIVG01000019001 Vitis vinifera HOM05D004389 ORTHO05D005457 1.5e-12 77.8 160 36.2
Nitab4.5_0002329g0100 Nicotiana tabacum HOM05D004389 ORTHO05D005457 2.0e-12 77.4 146 36.3
Lj9C683G9 Lonicera japonica HOM05D004389 ORTHO05D005457 2.6e-12 77.0 146 37.7
vmacro15154 Vaccinium macrocarpon HOM05D004389 ORTHO05D022937 2.6e-12 77.0 86 51.2
Dinv23968 Davidia involucrata HOM05D004389 ORTHO05D005457 4.4e-12 76.3 146 38.4
Cc02_g33710 Coffea canephora HOM05D004389 ORTHO05D005457 9.7e-12 75.1 160 35.0
Gohir.A08G211800 Gossypium hirsutum HOM05D004389 ORTHO05D005457 9.7e-12 75.1 160 35.0
Lj7A473T46 Lonicera japonica HOM05D004389 ORTHO05D005457 1.3e-11 74.7 159 35.2
Rhsim05G0143800 Rhododendron simsii HOM05D004389 ORTHO05D005457 1.3e-11 74.7 160 35.0
Duzib177G0146 Durio zibethinus HOM05D004389 ORTHO05D005457 2.2e-11 73.9 160 34.4
Haze_23899 Corylus avellana HOM05D004389 ORTHO05D005457 2.8e-11 73.6 146 36.3
CSS0006579 Camellia sinensis var. sinensis HOM05D004389 ORTHO05D005457 3.7e-11 73.2 146 35.6
CAN.G551.74 Capsicum annuum HOM05D004389 ORTHO05D005457 4.8e-11 72.8 149 32.9
Cpa.g.sc58.76 Carica papaya HOM05D004389 ORTHO05D005457 4.8e-11 72.8 146 34.9
CiPaw.07G015300 Carya illinoinensis HOM05D004389 ORTHO05D005457 4.8e-11 72.8 146 35.6
Haze_04228 Corylus avellana HOM05D004389 ORTHO05D005457 4.8e-11 72.8 160 35.0
Gorai.004G242800 Gossypium raimondii HOM05D004389 ORTHO05D005457 4.8e-11 72.8 160 33.8
COL.COLO4_29544 Corchorus olitorius HOM05D004389 ORTHO05D005457 1.1e-10 71.6 146 34.9
PGSC0003DMG400030976 Solanum tuberosum HOM05D004389 ORTHO05D005457 1.1e-10 71.6 146 33.6
Duzib128G0997 Durio zibethinus HOM05D004389 ORTHO05D005457 1.4e-10 71.2 146 34.2
Gohir.D08G228501 Gossypium hirsutum HOM05D004389 ORTHO05D005457 1.4e-10 71.2 160 33.8
Manes.09G078200 Manihot esculenta HOM05D004389 ORTHO05D005457 1.4e-10 71.2 160 35.6
SGA_v2.0_scaffold16G07733 Striga asiatica HOM05D004389 ORTHO05D005457 1.4e-10 71.2 152 34.9
GSVIVG01006266001 Vitis vinifera HOM05D004389 ORTHO05D005457 1.4e-10 71.2 160 35.6
Cfa006553 Carpinus fangiana HOM05D004389 ORTHO05D003318 1.8e-10 70.9 160 34.4
Sopen12g004700 Solanum pennellii HOM05D004389 ORTHO05D005457 1.8e-10 70.9 146 34.2
Aqoxy7G01925 Aquilegia oxysepala HOM05D004389 ORTHO05D005457 2.4e-10 70.5 148 35.1
Eucgr.H04472 Eucalyptus grandis HOM05D004389 ORTHO05D005457 2.4e-10 70.5 146 34.2
FvH4_6g05471 Fragaria vesca HOM05D004389 ORTHO05D005457 2.4e-10 70.5 148 35.1
DCAR_008416 Daucus carota HOM05D004389 ORTHO05D005457 3.1e-10 70.1 146 34.9
FAN05G0231 Fragaria x ananassa HOM05D004389 ORTHO05D005457 3.1e-10 70.1 145 33.1
FAN05G0672 Fragaria x ananassa HOM05D004389 ORTHO05D005457 3.1e-10 70.1 145 33.1
Medtr3g115100 Medicago truncatula HOM05D004389 ORTHO05D005457 3.1e-10 70.1 160 33.8
Nn8g41138 Nelumbo nucifera HOM05D004389 ORTHO05D005457 3.1e-10 70.1 137 37.2
PSO063G2909 Papaver somniferum HOM05D004389 ORTHO05D005457 3.1e-10 70.1 144 37.5
Sc16g0008410 Simmondsia chinensis HOM05D004389 ORTHO05D005457 4.1e-10 69.7 146 34.2
Thecc.05G307100 Theobroma cacao HOM05D004389 ORTHO05D005457 4.1e-10 69.7 146 34.9
CDE02G2165 Ceratophyllum demersum HOM05D004389 ORTHO05D005457 5.3e-10 69.3 158 33.5
Lj1g0012007 Lotus japonicus HOM05D004389 ORTHO05D005457 5.3e-10 69.3 152 35.5
THA.LOC104805865 Tarenaya hassleriana HOM05D004389 ORTHO05D005457 5.3e-10 69.3 146 34.2
Ciclev10018002m.g Citrus clementina HOM05D004389 ORTHO05D005457 7.0e-10 68.9 146 34.9
COL.COLO4_19842 Corchorus olitorius HOM05D004389 ORTHO05D005457 7.0e-10 68.9 146 34.2
FAN14G5008 Fragaria x ananassa HOM05D004389 ORTHO05D005457 7.0e-10 68.9 172 31.4
Glyma.06G240600 Glycine max HOM05D004389 ORTHO05D005457 7.0e-10 68.9 160 33.1
Nitab4.5_0002659g0010 Nicotiana tabacum HOM05D004389 ORTHO05D005457 7.0e-10 68.9 142 33.8
MBI16_g00840_MAGBIO Magnolia biondii HOM05D004389 ORTHO05D005457 9.1e-10 68.6 146 32.9
LjContig00312_ERROPOS870357g0027537 Lotus japonicus HOM05D004389 ORTHO05D005457 1.2e-09 68.2 152 34.9
Solyc12g009810.3 Solanum lycopersicum HOM05D004389 ORTHO05D005457 1.2e-09 68.2 145 33.1
Atru.chr2.467 Acer truncatum HOM05D004389 ORTHO05D005457 1.6e-09 67.8 160 33.8
Hma1.2p1_0666F.1_g199560 Hydrangea macrophylla HOM05D004389 ORTHO05D005457 1.6e-09 67.8 146 34.9
Hma1.2p1_1362F.1_g278175 Hydrangea macrophylla HOM05D004389 ORTHO05D005457 1.6e-09 67.8 146 34.9
Oeu045484.1 Olea europaea HOM05D004389 ORTHO05D005457 1.6e-09 67.8 160 31.9
Actinidia05713 Actinidia chinensis HOM05D004389 ORTHO05D005457 2.0e-09 67.4 146 35.6
PGSC0003DMG402007838 Solanum tuberosum HOM05D004389 ORTHO05D005457 2.0e-09 67.4 146 32.9
Migut.N00707 Erythranthe guttata HOM05D004389 ORTHO05D005457 2.6e-09 67.0 160 32.5
PSO782G4098 Papaver somniferum HOM05D004389 ORTHO05D005457 2.6e-09 67.0 150 34.0
vmacro19638 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 2.6e-09 67.0 147 34.7
CANSAT21G1920 Cannabis sativa HOM05D004389 ORTHO05D005457 4.5e-09 66.2 147 35.4
FAN05G0500 Fragaria x ananassa HOM05D004389 ORTHO05D005457 4.5e-09 66.2 148 33.8
QL03p004595 Quercus lobata HOM05D004389 ORTHO05D005457 4.5e-09 66.2 146 34.2
TPR.G33525 Trifolium pratense HOM05D004389 ORTHO05D005457 4.5e-09 66.2 160 34.4
Nitab4.5_0006964g0010 Nicotiana tabacum HOM05D004389 ORTHO05D005457 5.9e-09 65.9 97 38.1
PGR031G3032 Punica granatum HOM05D004389 ORTHO05D005457 5.9e-09 65.9 153 32.7
Prupe.6G329200 Prunus persica HOM05D004389 ORTHO05D005457 7.7e-09 65.5 146 33.6
RcHm_v2.0_Chr3g0454251 Rosa chinensis HOM05D004389 ORTHO05D005457 7.7e-09 65.5 145 33.1
CANSAT21G2311 Cannabis sativa HOM05D004389 ORTHO05D005457 1.0e-08 65.1 136 36.0
AUR62005084 Chenopodium quinoa HOM05D004389 ORTHO05D005457 1.0e-08 65.1 142 33.8
Nitab4.5_0000401g0080 Nicotiana tabacum HOM05D004389 ORTHO05D005457 1.0e-08 65.1 97 38.1
ATR0626G001 Amborella trichopoda HOM05D004389 ORTHO05D005457 1.3e-08 64.7 146 33.6
FAN09G0842 Fragaria x ananassa HOM05D004389 ORTHO05D005457 1.3e-08 64.7 148 33.8
TWI53G0891 Tripterygium wilfordii HOM05D004389 ORTHO05D005457 1.3e-08 64.7 158 30.4
AUR62006921 Chenopodium quinoa HOM05D004389 ORTHO05D005457 1.7e-08 64.3 152 31.6
Sabra05G0037000 Salix brachista HOM05D004389 ORTHO05D005457 1.7e-08 64.3 147 34.7
Zm00001eb272600 Zea mays HOM05D004389 ORTHO05D005457 1.7e-08 64.3 134 37.3
AUR62000890 Chenopodium quinoa HOM05D004389 ORTHO05D005457 2.2e-08 63.9 146 32.9
FvH4_5g27531 Fragaria vesca HOM05D004389 ORTHO05D005457 2.2e-08 63.9 159 31.4
FAN18G1342 Fragaria x ananassa HOM05D004389 ORTHO05D005457 2.2e-08 63.9 159 31.4
Potri.013G025600 Populus trichocarpa HOM05D004389 ORTHO05D005457 2.9e-08 63.5 147 34.0
TWI73G0431 Tripterygium wilfordii HOM05D004389 ORTHO05D005457 2.9e-08 63.5 146 32.9
FvH4_6g10990 Fragaria vesca HOM05D004389 ORTHO05D005457 3.8e-08 63.2 69 47.8
FAN05G1752 Fragaria x ananassa HOM05D004389 ORTHO05D005457 5.0e-08 62.8 148 33.1
Phvul.007G101500 Phaseolus vulgaris HOM05D004389 ORTHO05D005457 5.0e-08 62.8 160 31.9
Sp7g15350 Schrenkiella parvula HOM05D004389 ORTHO05D005457 5.0e-08 62.8 144 34.7
HPP92_010418 Vanilla planifolia HOM05D004389 ORTHO05D005457 5.0e-08 62.8 141 31.2
Zm00001eb264580 Zea mays HOM05D004389 ORTHO05D005457 5.0e-08 62.8 153 34.6
Ah.04g159790 Amaranthus hybridus HOM05D004389 ORTHO05D005457 6.5e-08 62.4 146 32.9
MD04G1208300 Malus domestica HOM05D004389 ORTHO05D005457 6.5e-08 62.4 146 34.2
Potri.005G036500 Populus trichocarpa HOM05D004389 ORTHO05D005457 8.5e-08 62.0 161 32.9
vmacro08924 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 1.1e-07 61.6 144 33.3
Glyma.05G086900 Glycine max HOM05D004389 ORTHO05D005457 1.5e-07 61.2 133 33.8
Sabra13G0026700 Salix brachista HOM05D004389 ORTHO05D005457 2.5e-07 60.5 162 33.3
SGA_v2.0_scaffold11G05813 Striga asiatica HOM05D004389 ORTHO05D005457 3.2e-07 60.1 150 32.0
EL10Ac4g09330 Beta vulgaris HOM05D004389 ORTHO05D005457 4.2e-07 59.7 160 29.4
HanXRQChr04g0126711 Helianthus annuus HOM05D004389 ORTHO05D005457 4.2e-07 59.7 160 31.2
ECA236G1487 Erigeron canadensis HOM05D004389 ORTHO05D005457 5.5e-07 59.3 160 31.2
HanXRQChr14g0460141 Helianthus annuus HOM05D004389 ORTHO05D005457 5.5e-07 59.3 150 32.7
Hund07052 Selenicereus undatus HOM05D004389 ORTHO05D005457 9.4e-07 58.5 138 33.3
unitig_747.g21568 Utricularia gibba HOM05D004389 ORTHO05D005457 9.4e-07 58.5 149 30.9
Zm00001eb380920 Zea mays HOM05D004389 ORTHO05D005457 9.4e-07 58.5 130 36.2
Aa31sc17G40 Aethionema arabicum HOM05D004389 ORTHO05D005457 1.2e-06 58.2 133 34.6
Lalb_Chr05g0219701 Lupinus albus HOM05D004389 ORTHO05D005457 1.2e-06 58.2 143 30.8
BcaNung00158 Brassica carinata HOM05D004389 ORTHO05D005457 2.7e-06 57.0 141 32.6
Aa31sc17G90 Aethionema arabicum HOM05D004389 ORTHO05D005457 4.7e-06 56.2 146 32.9
AL7G38020 Arabidopsis lyrata HOM05D004389 ORTHO05D005457 4.7e-06 56.2 143 32.2
A01p20570 Brassica napus HOM05D004389 ORTHO05D005457 4.7e-06 56.2 136 34.6
Thhalv10026361m.g Eutrema salsugineum HOM05D004389 ORTHO05D005457 4.7e-06 56.2 142 33.1
Medtr3g096610 Medicago truncatula HOM05D004389 ORTHO05D005457 4.7e-06 56.2 160 30.6
Sed0018697 Sechium edule HOM05D004389 ORTHO05D005457 4.7e-06 56.2 138 31.9
BcaB03g14176 Brassica carinata HOM05D004389 ORTHO05D005457 6.1e-06 55.8 144 34.7
BcaC09g50404 Brassica carinata HOM05D004389 ORTHO05D005457 6.1e-06 55.8 133 35.3
C01p25870 Brassica napus HOM05D004389 ORTHO05D005457 6.1e-06 55.8 133 35.3
BolC1t02532H Brassica oleracea HOM05D004389 ORTHO05D005457 6.1e-06 55.8 133 35.3
Aqoxy5G02271 Aquilegia oxysepala HOM05D004389 ORTHO05D005457 8.0e-06 55.5 56 51.8
AT4G16710 Arabidopsis thaliana HOM05D004389 ORTHO05D005457 8.0e-06 55.5 141 32.6


User provided reference genes

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