Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 1.2e-200 703.0 372 100.0
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 2.3e-186 655.6 373 93.3
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 2.5e-169 599.0 370 87.0
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 4.8e-168 594.7 381 84.5
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 1.8e-167 592.8 381 83.5
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 5.3e-167 591.3 366 82.0
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 5.8e-166 587.8 370 83.8
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 4.2e-164 581.6 374 81.6
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 3.5e-163 578.6 369 82.4
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 5.1e-162 574.7 370 81.4
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 2.5e-161 572.4 366 82.8
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 7.4e-161 570.9 371 81.1
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 7.4e-161 570.9 366 82.2
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 8.2e-160 567.4 368 82.1
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 8.2e-160 567.4 368 82.1
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 8.2e-160 567.4 370 77.6
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 1.1e-159 567.0 357 84.0
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 1.8e-159 566.2 360 82.8
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 5.3e-159 564.7 374 79.9
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 5.3e-159 564.7 370 77.6
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 6.9e-159 564.3 370 80.0
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 1.2e-158 563.5 375 79.7
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 1.2e-158 563.5 373 80.2
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 1.2e-158 563.5 396 76.5
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 2.6e-158 562.4 383 78.9
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 3.4e-158 562.0 367 80.9
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 3.4e-158 562.0 366 81.7
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 3.4e-158 562.0 360 81.4
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 4.5e-158 561.6 365 81.9
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 4.5e-158 561.6 372 79.3
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 5.9e-158 561.2 372 79.3
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 7.6e-158 560.8 368 79.9
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.0e-157 560.5 366 81.7
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 1.0e-157 560.5 366 81.1
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.7e-157 559.7 372 79.0
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 2.2e-157 559.3 370 80.0
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 2.9e-157 558.9 364 80.2
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 5.0e-157 558.1 374 75.4
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 6.5e-157 557.8 369 81.0
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 1.4e-156 556.6 374 74.6
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 1.9e-156 556.2 372 78.8
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 2.5e-156 555.8 369 77.8
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 2.5e-156 555.8 368 80.4
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 2.5e-156 555.8 368 80.4
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 4.2e-156 555.1 361 82.0
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 5.5e-156 554.7 366 77.0
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 3.6e-155 552.0 363 78.2
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 3.6e-155 552.0 368 76.4
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 1.0e-154 550.4 343 82.2
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 1.3e-154 550.1 369 76.4
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 3.0e-154 548.9 358 78.5
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 5.1e-154 548.1 375 78.7
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 6.7e-154 547.7 368 77.7
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 8.7e-154 547.4 343 82.2
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 1.9e-153 546.2 365 75.9
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.9e-153 546.2 371 74.4
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 3.3e-153 545.4 362 79.0
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 3.3e-153 545.4 373 78.0
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 1.6e-152 543.1 369 79.4
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 1.6e-152 543.1 367 73.6
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 4.8e-152 541.6 369 77.8
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 4.8e-152 541.6 303 86.1
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 6.3e-152 541.2 353 80.2
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 8.2e-152 540.8 364 77.7
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 8.2e-152 540.8 303 85.8
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 1.1e-151 540.4 362 73.5
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 1.4e-151 540.0 361 79.2
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 1.8e-151 539.7 363 76.6
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 2.4e-151 539.3 371 73.3
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 2.4e-151 539.3 346 79.8
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 4.1e-151 538.5 345 79.4
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 4.1e-151 538.5 369 74.3
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 5.3e-151 538.1 369 74.0
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 9.0e-151 537.3 362 74.9
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 1.5e-150 536.6 371 73.6
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 2.0e-150 536.2 374 77.0
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 2.6e-150 535.8 369 77.2
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 2.6e-150 535.8 374 74.1
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 2.6e-150 535.8 335 79.4
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 3.4e-150 535.4 369 77.2
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 4.5e-150 535.0 332 80.7
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 5.9e-150 534.6 343 81.3
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 5.9e-150 534.6 368 73.6
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 7.7e-150 534.3 374 75.9
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 1.0e-149 533.9 352 76.1
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 1.3e-149 533.5 358 79.1
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 1.7e-149 533.1 361 78.1
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 2.2e-149 532.7 361 78.7
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 2.2e-149 532.7 361 78.7
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 3.8e-149 531.9 369 77.0
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 1.9e-148 529.6 372 73.1
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 5.5e-148 528.1 365 76.7
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 5.5e-148 528.1 365 73.2
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 3.6e-147 525.4 367 76.6
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 3.6e-147 525.4 386 69.4
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 2.3e-146 522.7 392 73.2
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 3.0e-146 522.3 313 79.9
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 1.1e-145 520.4 312 80.1
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 2.0e-145 519.6 365 76.7
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 7.4e-145 517.7 348 74.1
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 1.7e-144 516.5 367 76.3
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 2.8e-144 515.8 365 76.2
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 2.8e-144 515.8 365 76.2
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 2.8e-144 515.8 361 70.6
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 2.8e-144 515.8 351 72.6
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 3.7e-144 515.4 311 80.7
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 3.7e-144 515.4 310 79.0
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 3.7e-144 515.4 312 80.1
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 4.8e-144 515.0 355 72.4
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 6.3e-144 514.6 367 74.1
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 4.1e-143 511.9 457 62.8
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 4.1e-143 511.9 363 71.3
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 4.1e-143 511.9 373 75.1
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 3.4e-142 508.8 377 69.5
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 3.4e-142 508.8 364 70.9
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 1.0e-141 507.3 366 71.6
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 1.7e-141 506.5 303 80.2
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 2.9e-141 505.8 358 70.4
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 3.2e-140 502.3 313 78.0
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 9.4e-140 500.7 318 77.4
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 1.6e-139 500.0 345 70.7
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 6.7e-138 494.6 366 68.6
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 6.7e-138 494.6 370 73.2
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 1.4e-135 486.9 311 77.2
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 2.4e-135 486.1 289 80.6
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 9.4e-132 474.2 356 73.0
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 3.6e-131 472.2 390 64.4
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 4.0e-130 468.8 268 82.8
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 8.8e-130 467.6 294 83.0
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 7.5e-129 464.5 303 80.5
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 2.2e-128 463.0 375 68.8
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 1.4e-127 460.3 350 72.3
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 2.4e-127 459.5 357 63.3
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 7.7e-126 454.5 278 78.8
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 1.3e-125 453.8 336 64.9
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 1.4e-122 443.7 384 64.8
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 1.2e-121 440.7 308 72.7
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 2.0e-121 439.9 362 65.7
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 2.4e-119 433.0 297 67.7
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 1.6e-118 430.3 298 65.8
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 1.1e-116 424.1 300 65.0
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 3.2e-116 422.5 315 65.1
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 9.5e-116 421.0 266 77.8
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 8.0e-115 417.9 364 61.0
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 1.2e-113 414.1 370 64.9
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 2.2e-112 409.8 326 60.7
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 6.1e-107 391.7 426 52.3
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 1.1e-103 380.9 223 83.0
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 9.2e-103 377.9 237 79.3
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 2.7e-94 349.7 308 57.1
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 4.4e-89 332.4 210 71.9
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 8.9e-82 308.1 248 68.1
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 2.6e-65 253.4 150 81.3
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 5.4e-63 245.7 318 49.1
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 3.4e-57 226.5 168 73.2
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 3.2e-55 219.9 171 62.6
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 9.0e-42 175.3 164 56.1
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 6.5e-32 142.5 94 76.6
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 4.4e-28 129.8 100 66.0
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 1.8e-26 124.4 307 29.6
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 6.5e-24 115.9 337 28.5
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 2.7e-22 110.5 65 75.4
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 8.8e-21 105.5 298 27.2
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 9.7e-20 102.1 252 32.5
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 4.1e-18 96.7 380 25.5
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 9.1e-18 95.5 66 74.2
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 9.1e-18 95.5 66 74.2
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 2.0e-17 94.4 66 74.2
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 1.0e-16 92.0 65 75.4
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 5.5e-15 86.3 90 68.9
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 7.2e-15 85.9 59 71.2
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 1.2e-14 85.1 89 69.7
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 3.7e-11 73.6 109 35.8
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 4.5e-09 66.6 33 90.9
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 3.8e-08 63.5 35 77.1
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 5.5e-07 59.7 41 70.7
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 9.4e-07 58.9 41 68.3
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 1.6e-06 58.2 39 71.8
HanXRQChr05g0141861 Helianthus annuus HOM05D000001 ORTHO05D009862 8.0e-06 55.8 50 58.0


User provided reference genes

Program Settings