Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17151 Vaccinium macrocarpon HOM05D007648 ORTHO05D009613 1.4e-38 162.5 84 100.0
Rhsim07G0248300 Rhododendron simsii HOM05D007648 ORTHO05D009613 4.9e-36 154.1 84 92.9
Rhsim07G0248100 Rhododendron simsii HOM05D007648 ORTHO05D009613 7.3e-32 140.2 80 88.8
CSS0030217 Camellia sinensis var. sinensis HOM05D007648 ORTHO05D009613 1.3e-28 129.4 82 81.7
Actinidia29767 Actinidia chinensis HOM05D007648 ORTHO05D009613 1.1e-27 126.3 83 79.5
GSVIVG01008741001 Vitis vinifera HOM05D007648 ORTHO05D009613 1.1e-27 126.3 82 79.3
Dinv31891 Davidia involucrata HOM05D007648 ORTHO05D009613 1.9e-27 125.6 81 77.8
COL.COLO4_26084 Corchorus olitorius HOM05D007648 ORTHO05D009613 1.2e-26 122.9 81 79.0
Duzib093G2040 Durio zibethinus HOM05D007648 ORTHO05D009613 3.5e-26 121.3 82 76.8
Manes.05G142600 Manihot esculenta HOM05D007648 ORTHO05D009613 7.8e-26 120.2 82 74.4
Thecc.08G051700 Theobroma cacao HOM05D007648 ORTHO05D009613 7.8e-26 120.2 81 77.8
TAR625G0376 Trochodendron aralioides HOM05D007648 ORTHO05D009613 7.8e-26 120.2 84 75.0
Psat6g001120 Pisum sativum HOM05D007648 ORTHO05D009613 1.7e-25 119.0 78 75.6
QL02p012929 Quercus lobata HOM05D007648 ORTHO05D009613 1.7e-25 119.0 81 76.5
Potri.014G181400 Populus trichocarpa HOM05D007648 ORTHO05D009613 3.0e-25 118.2 81 74.1
Aqoxy5G01099 Aquilegia oxysepala HOM05D007648 ORTHO05D009613 1.5e-24 115.9 82 73.2
Ca_13484_v3 Cicer arietinum L. HOM05D007648 ORTHO05D009613 1.5e-24 115.9 78 74.4
CiPaw.07G143700 Carya illinoinensis HOM05D007648 ORTHO05D009613 1.9e-24 115.5 82 73.2
Glyma.17G261200 Glycine max HOM05D007648 ORTHO05D009613 1.9e-24 115.5 77 75.3
Sabra14G0141300 Salix brachista HOM05D000525 ORTHO05D001368 1.9e-24 115.5 81 72.8
Haze_22702 Corylus avellana HOM05D007648 ORTHO05D009613 3.3e-24 114.8 80 73.8
Lj5g0008894 Lotus japonicus HOM05D007648 ORTHO05D009613 3.3e-24 114.8 78 73.1
MD15G1006800 Malus domestica HOM05D007648 ORTHO05D009613 3.3e-24 114.8 82 72.0
Prupe.1G359500 Prunus persica HOM05D007648 ORTHO05D009613 3.3e-24 114.8 81 71.6
ClCG05G015420 Citrullus lanatus HOM05D007648 ORTHO05D009613 5.6e-24 114.0 81 70.4
Lsat_1_v5_gn_5_1580 Lactuca sativa HOM05D007648 ORTHO05D009613 5.6e-24 114.0 82 67.1
MD08G1007600 Malus domestica HOM05D007648 ORTHO05D009613 5.6e-24 114.0 82 72.0
Medtr1g026100 Medicago truncatula HOM05D007648 ORTHO05D009613 5.6e-24 114.0 78 73.1
Lalb_Chr19g0131601 Lupinus albus HOM05D007648 ORTHO05D009613 7.3e-24 113.6 78 73.1
arahy.Tifrunner.gnm1.ann1.8I3IQY Arachis hypogaea HOM05D007648 ORTHO05D009613 1.6e-23 112.5 80 71.2
Cc10_g01140 Coffea canephora HOM05D007648 ORTHO05D009613 1.6e-23 112.5 78 74.4
FvH4_2g37960 Fragaria vesca HOM05D007648 ORTHO05D009613 1.6e-23 112.5 81 67.9
PGSC0003DMG400023820 Solanum tuberosum HOM05D007648 ORTHO05D009613 2.1e-23 112.1 80 71.2
arahy.Tifrunner.gnm1.ann1.EILY3I Arachis hypogaea HOM05D007648 ORTHO05D009613 2.8e-23 111.7 78 73.1
DCAR_021446 Daucus carota HOM05D007648 ORTHO05D009613 2.8e-23 111.7 82 69.5
Sc02g0008880 Simmondsia chinensis HOM05D007648 ORTHO05D009613 2.8e-23 111.7 82 70.7
RcHm_v2.0_Chr6g0303661 Rosa chinensis HOM05D007648 ORTHO05D009613 3.6e-23 111.3 81 69.1
SalBow7G1731 Salvia bowleyana HOM05D007648 ORTHO05D009613 4.7e-23 110.9 82 69.5
Sopen06g017690 Solanum pennellii HOM05D007648 ORTHO05D009613 4.7e-23 110.9 80 70.0
CAN.G22.4 Capsicum annuum HOM05D007648 ORTHO05D009613 6.2e-23 110.5 80 68.8
ECA238G3742 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.2e-23 110.5 73 74.0
CARHR069590 Cardamine hirsuta HOM05D007648 ORTHO05D009613 8.1e-23 110.2 82 68.3
MELO3C003728.2 Cucumis melo HOM05D007648 ORTHO05D009613 8.1e-23 110.2 82 67.1
FAN15G0474 Fragaria x ananassa HOM05D007648 ORTHO05D009613 8.1e-23 110.2 81 66.7
FAN20G1741 Fragaria x ananassa HOM05D007648 ORTHO05D009613 8.1e-23 110.2 81 66.7
HanXRQChr06g0185111 Helianthus annuus HOM05D007648 ORTHO05D009613 1.1e-22 109.8 84 65.5
VMungo0647G0751 Vigna mungo HOM05D007648 ORTHO05D009613 1.1e-22 109.8 75 74.7
Atru.chr13.217 Acer truncatum HOM05D007648 ORTHO05D009613 1.4e-22 109.4 80 71.2
Phvul.001G002600 Phaseolus vulgaris HOM05D007648 ORTHO05D009613 1.4e-22 109.4 79 70.9
Sc02g0008840 Simmondsia chinensis HOM05D007648 ORTHO05D009613 1.4e-22 109.4 82 69.5
TWI12G0541 Tripterygium wilfordii HOM05D007648 ORTHO05D009613 1.4e-22 109.4 83 67.5
Carub.0002s2295 Capsella rubella HOM05D007648 ORTHO05D009613 1.8e-22 109.0 82 67.1
Gohir.D01G035600 Gossypium hirsutum HOM05D007648 ORTHO05D009613 1.8e-22 109.0 77 71.4
Sed0006121 Sechium edule HOM05D007648 ORTHO05D009613 1.8e-22 109.0 82 67.1
THA.LOC104811443 Tarenaya hassleriana HOM05D007648 ORTHO05D009613 1.8e-22 109.0 82 67.1
BraA08t32933Z Brassica rapa HOM05D007648 ORTHO05D009613 2.3e-22 108.6 84 67.9
Gorai.002G043700 Gossypium raimondii HOM05D007648 ORTHO05D009613 2.3e-22 108.6 77 71.4
PSO210G3155 Papaver somniferum HOM05D007648 ORTHO05D009613 2.3e-22 108.6 75 73.3
AT1G76065 Arabidopsis thaliana HOM05D007648 ORTHO05D009613 3.1e-22 108.2 81 66.7
A08p09340 Brassica napus HOM05D007648 ORTHO05D009613 3.1e-22 108.2 84 67.9
BolC8t48002H Brassica oleracea HOM05D007648 ORTHO05D009613 3.1e-22 108.2 84 67.9
CsaV3_3G046120 Cucumis sativus L. HOM05D007648 ORTHO05D009613 3.1e-22 108.2 82 65.9
Eucgr.F03708 Eucalyptus grandis HOM05D007648 ORTHO05D009613 3.1e-22 108.2 82 69.5
Gohir.A01G044700 Gossypium hirsutum HOM05D007648 ORTHO05D009613 4.0e-22 107.8 77 70.1
Phvul.001G002300 Phaseolus vulgaris HOM05D007648 ORTHO05D009613 4.0e-22 107.8 78 70.5
Hund05152 Selenicereus undatus HOM05D000399 ORTHO05D000304 5.2e-22 107.5 82 64.6
BcaB07g30075 Brassica carinata HOM05D007648 ORTHO05D009613 8.9e-22 106.7 84 67.9
BcaC07g37632 Brassica carinata HOM05D007648 ORTHO05D009613 8.9e-22 106.7 84 66.7
Ah.00g000660 Amaranthus hybridus HOM05D007648 ORTHO05D009613 1.5e-21 105.9 80 66.2
AL2G36100 Arabidopsis lyrata HOM05D007648 ORTHO05D009613 1.5e-21 105.9 81 64.2
EL10Ac1g02083 Beta vulgaris HOM05D000399 ORTHO05D000304 1.5e-21 105.9 80 67.5
Thhalv10019391m.g Eutrema salsugineum HOM05D007648 ORTHO05D009613 1.5e-21 105.9 82 67.1
Ciclev10003012m.g Citrus clementina HOM05D007648 ORTHO05D009613 2.6e-21 105.1 82 64.6
CAN.G22.7 Capsicum annuum HOM05D007648 ORTHO05D009613 9.9e-21 103.2 80 65.0
Aa31LG4G6180 Aethionema arabicum HOM05D007648 ORTHO05D009613 1.3e-20 102.8 80 65.0
HPP92_003481 Vanilla planifolia HOM05D007648 ORTHO05D009613 1.3e-20 102.8 81 65.4
Migut.C00899 Erythranthe guttata HOM05D007648 ORTHO05D009613 3.7e-20 101.3 79 65.8
HPP92_026879 Vanilla planifolia HOM05D007648 ORTHO05D009613 4.9e-20 100.9 81 65.4
Os02g0667000 Oryza sativa ssp. japonica HOM05D007648 ORTHO05D009613 1.1e-19 99.8 77 64.9
BraA02t08664Z Brassica rapa HOM05D007648 ORTHO05D009613 1.6e-18 95.9 75 65.3
CDE04G2628 Ceratophyllum demersum HOM05D007648 ORTHO05D009613 2.1e-18 95.5 76 65.8
BolC2t11627H Brassica oleracea HOM05D007648 ORTHO05D009613 7.8e-18 93.6 82 62.2
Peaxi162Scf00394g00212 Petunia axillaris HOM05D007648 ORTHO05D009613 3.9e-17 91.3 64 71.9
Nitab4.5_0000716g0050 Nicotiana tabacum HOM05D000998 ORTHO05D000806 5.1e-17 90.9 65 69.2
Nitab4.5_0004193g0030 Nicotiana tabacum HOM05D000998 ORTHO05D000806 6.6e-17 90.5 68 66.2
Mapoly0088s0028 Marchantia polymorpha HOM05D007648 ORTHO05D009613 4.3e-16 87.8 77 55.8
MBI05_g46751_MAGBIO Magnolia biondii HOM05D007648 ORTHO05D009613 7.3e-16 87.0 73 61.6
C02p55750 Brassica napus HOM05D007648 ORTHO05D009613 1.4e-14 82.8 70 61.4
AUR62036713 Chenopodium quinoa HOM05D000399 ORTHO05D000304 8.9e-14 80.1 134 39.6
AagrBONN_evm.TU.Sc2ySwM_344.3278 Anthoceros agrestis HOM05D007648 ORTHO05D009613 3.4e-13 78.2 76 53.9
A02p36690 Brassica napus HOM05D007648 ORTHO05D009613 7.6e-13 77.0 60 65.0
Pp3c8_20950 Physcomitrium patens HOM05D007648 ORTHO05D009613 8.4e-12 73.6 77 53.2
Actinidia37950 Actinidia chinensis HOM05D007648 ORTHO05D009613 2.3e-09 65.5 39 74.4
AUR62013884 Chenopodium quinoa HOM05D007648 ORTHO05D009613 8.7e-09 63.5 78 51.3
SalBow1G6040 Salvia bowleyana HOM05D038733 ORTHO05D009613 8.7e-09 63.5 46 63.0
SalBow7G3523 Salvia bowleyana HOM05D038733 ORTHO05D009613 8.7e-09 63.5 46 63.0
unitig_748.g7721 Utricularia gibba HOM05D007648 ORTHO05D009613 1.9e-08 62.4 46 60.9
Os03g0159800 Oryza sativa ssp. japonica HOM05D007648 ORTHO05D009613 3.3e-08 61.6 45 62.2
MCO07G444 Micromonas commoda HOM05D007648 ORTHO05D009613 6.2e-07 57.4 72 43.1
Cre14.g626667 Chlamydomonas reinhardtii HOM05D007648 ORTHO05D009613 2.4e-06 55.5 80 41.2


User provided reference genes

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