Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17086 Vaccinium macrocarpon HOM05D004597 ORTHO05D005629 1.4e-66 256.1 131 100.0
vmacro17088 Vaccinium macrocarpon HOM05D004597 ORTHO05D005629 1.1e-50 203.4 118 89.0
Rhsim08G0029600 Rhododendron simsii HOM05D004597 ORTHO05D005629 2.1e-41 172.6 121 78.5
Rhsim08G0029700 Rhododendron simsii HOM05D004597 ORTHO05D005629 3.5e-41 171.8 121 81.0
Dinv42426 Davidia involucrata HOM05D004597 ORTHO05D005629 6.9e-37 157.5 119 70.6
Cfa002950 Carpinus fangiana HOM05D004597 ORTHO05D005629 2.9e-35 152.1 118 72.9
Actinidia30251 Actinidia chinensis HOM05D004597 ORTHO05D005629 4.9e-35 151.4 118 70.3
Potri.018G063300 Populus trichocarpa HOM05D004597 ORTHO05D005629 4.9e-35 151.4 118 71.2
Dinv25516 Davidia involucrata HOM05D004597 ORTHO05D005629 1.4e-34 149.8 119 71.4
QL11p002688 Quercus lobata HOM05D004597 ORTHO05D005629 1.9e-34 149.4 120 67.5
Sabra06G0107600 Salix brachista HOM05D004597 ORTHO05D005629 2.4e-34 149.1 118 67.8
CSS0048779 Camellia sinensis var. sinensis HOM05D004597 ORTHO05D005629 5.4e-34 147.9 125 71.2
Hma1.2p1_0169F.1_g074350 Hydrangea macrophylla HOM05D004597 ORTHO05D005629 2.1e-33 146.0 111 65.8
CiPaw.03G201900 Carya illinoinensis HOM05D004597 ORTHO05D005629 2.7e-33 145.6 118 68.6
Haze_26057 Corylus avellana HOM05D004597 ORTHO05D005629 2.7e-33 145.6 118 70.3
Manes.16G091900 Manihot esculenta HOM05D004597 ORTHO05D005629 2.7e-33 145.6 119 67.2
Potri.006G137500 Populus trichocarpa HOM05D004597 ORTHO05D005629 6.0e-33 144.4 118 67.8
GSVIVG01015027001 Vitis vinifera HOM05D004597 ORTHO05D005629 3.0e-32 142.1 118 66.9
Peaxi162Scf00191g00102 Petunia axillaris HOM05D004597 ORTHO05D005629 3.9e-32 141.7 119 65.5
QL11p002680 Quercus lobata HOM05D004597 ORTHO05D005629 3.9e-32 141.7 120 65.8
Eucgr.C00774 Eucalyptus grandis HOM05D004597 ORTHO05D005629 6.6e-32 141.0 118 64.4
CANSAT56G1179 Cannabis sativa HOM05D004597 ORTHO05D005629 4.3e-31 138.3 118 63.6
Sabra18G0056100 Salix brachista HOM05D004597 ORTHO05D005629 4.3e-31 138.3 118 65.3
Nn6g35647 Nelumbo nucifera HOM05D004597 ORTHO05D005629 7.4e-31 137.5 119 66.4
COL.COLO4_21219 Corchorus olitorius HOM05D004597 ORTHO05D005629 9.6e-31 137.1 119 64.7
Atru.chr7.1756 Acer truncatum HOM05D004597 ORTHO05D005629 2.1e-30 136.0 118 61.9
Ah.09g229020 Amaranthus hybridus HOM05D004597 ORTHO05D005629 2.1e-30 136.0 118 62.7
PGR119G0607 Punica granatum HOM05D004597 ORTHO05D005629 2.1e-30 136.0 117 63.2
Nitab4.5_0001699g0010 Nicotiana tabacum HOM05D004597 ORTHO05D005629 2.8e-30 135.6 118 62.7
Prupe.7G193200 Prunus persica HOM05D004597 ORTHO05D005629 1.1e-29 133.7 118 58.5
Thecc.09G071400 Theobroma cacao HOM05D004597 ORTHO05D005629 1.4e-29 133.3 116 62.1
EL10Ac8g18994 Beta vulgaris HOM05D004597 ORTHO05D005629 2.4e-29 132.5 118 61.0
Ciclev10009453m.g Citrus clementina HOM05D004597 ORTHO05D005629 2.4e-29 132.5 117 61.5
AUR62028306 Chenopodium quinoa HOM05D004597 ORTHO05D005629 3.1e-29 132.1 118 59.3
TWI32G1285 Tripterygium wilfordii HOM05D004597 ORTHO05D005629 5.3e-29 131.3 118 63.6
Gohir.A08G246600 Gossypium hirsutum HOM05D004597 ORTHO05D005629 6.9e-29 131.0 112 62.5
Nitab4.5_0007540g0030 Nicotiana tabacum HOM05D004597 ORTHO05D005629 6.9e-29 131.0 118 62.7
FAN28G1763 Fragaria x ananassa HOM05D004597 ORTHO05D005629 9.0e-29 130.6 119 59.7
Phvul.003G128266 Phaseolus vulgaris HOM05D004597 ORTHO05D005629 1.5e-28 129.8 118 61.9
RcHm_v2.0_Chr2g0095781 Rosa chinensis HOM05D004597 ORTHO05D005629 1.5e-28 129.8 118 60.2
Hund08871 Selenicereus undatus HOM05D004597 ORTHO05D005629 2.6e-28 129.0 118 62.7
CAN.G210.7 Capsicum annuum HOM05D004597 ORTHO05D005629 3.4e-28 128.6 118 61.0
FvH4_1g09250 Fragaria vesca HOM05D004597 ORTHO05D005629 3.4e-28 128.6 118 59.3
FAN19G2435 Fragaria x ananassa HOM05D004597 ORTHO05D005629 3.4e-28 128.6 118 59.3
FAN23G2914 Fragaria x ananassa HOM05D004597 ORTHO05D005629 3.4e-28 128.6 118 59.3
FAN26G0325 Fragaria x ananassa HOM05D004597 ORTHO05D005629 3.4e-28 128.6 118 59.3
FAN26G3440 Fragaria x ananassa HOM05D004597 ORTHO05D005629 3.4e-28 128.6 118 59.3
Migut.J00892 Erythranthe guttata HOM05D004597 ORTHO05D005629 9.9e-28 127.1 112 59.8
Gohir.D08G267800 Gossypium hirsutum HOM05D004597 ORTHO05D005629 9.9e-28 127.1 112 61.6
Gorai.004G285400 Gossypium raimondii HOM05D004597 ORTHO05D005629 9.9e-28 127.1 112 61.6
PGSC0003DMG400013551 Solanum tuberosum HOM05D004597 ORTHO05D005629 2.9e-27 125.6 118 59.3
Cc06_g12610 Coffea canephora HOM05D004597 ORTHO05D005629 3.8e-27 125.2 114 61.4
Duzib150G0058 Durio zibethinus HOM05D004597 ORTHO05D005629 4.9e-27 124.8 112 62.5
Glyma.17G046500 Glycine max HOM05D004597 ORTHO05D005629 6.4e-27 124.4 118 59.3
Nitab4.5_0001092g0070 Nicotiana tabacum HOM05D004597 ORTHO05D005629 8.4e-27 124.0 120 61.7
Solyc07g042440.3 Solanum lycopersicum HOM05D004597 ORTHO05D005629 1.4e-26 123.2 118 58.5
VMungo1215G0896 Vigna mungo HOM05D004597 ORTHO05D005629 1.4e-26 123.2 118 59.3
Sopen07g022070 Solanum pennellii HOM05D004597 ORTHO05D005629 1.9e-26 122.9 118 58.5
Sed0000155 Sechium edule HOM05D004597 ORTHO05D005629 2.4e-26 122.5 121 63.6
CsaV3_6G002530 Cucumis sativus L. HOM05D004597 ORTHO05D005629 3.2e-26 122.1 121 62.8
Glyma.13G113200 Glycine max HOM05D004597 ORTHO05D005629 9.3e-26 120.6 118 58.5
Nitab4.5_0000400g0030 Nicotiana tabacum HOM05D004597 ORTHO05D005629 9.3e-26 120.6 119 62.2
Oeu028117.1 Olea europaea HOM05D004597 ORTHO05D005629 1.2e-25 120.2 118 56.8
SalBow6G0240 Salvia bowleyana HOM05D004597 ORTHO05D005629 1.6e-25 119.8 118 59.3
Hund26094 Selenicereus undatus HOM05D004597 ORTHO05D005629 2.1e-25 119.4 120 57.5
MSTRG.19433 Avicennia marina HOM05D004597 ORTHO05D005629 2.7e-25 119.0 118 57.6
MD02G1099800 Malus domestica HOM05D004597 ORTHO05D005629 2.7e-25 119.0 118 55.9
DCAR_024773 Daucus carota HOM05D004597 ORTHO05D005629 3.5e-25 118.6 112 59.8
SGA_v2.0_scaffold281G46915 Striga asiatica HOM05D004597 ORTHO05D005629 3.5e-25 118.6 118 55.1
DCAR_011918 Daucus carota HOM05D004597 ORTHO05D005629 1.0e-24 117.1 118 61.0
Lalb_Chr13g0299261 Lupinus albus HOM05D004597 ORTHO05D005629 1.3e-24 116.7 114 56.1
MELO3C025034.2 Cucumis melo HOM05D004597 ORTHO05D005629 1.8e-24 116.3 119 59.7
Sc18g0002790 Simmondsia chinensis HOM05D004597 ORTHO05D005629 1.8e-24 116.3 118 55.9
ClCG08G002020 Citrullus lanatus HOM05D004597 ORTHO05D005629 2.3e-24 115.9 130 56.2
Oeu055329.1 Olea europaea HOM05D004597 ORTHO05D005629 8.7e-24 114.0 118 56.8
PSO421G0191 Papaver somniferum HOM05D004597 ORTHO05D005629 1.1e-23 113.6 121 59.5
Sed0006126 Sechium edule HOM05D004597 ORTHO05D005629 1.1e-23 113.6 114 59.6
Peaxi162Scf00418g00113 Petunia axillaris HOM05D004597 ORTHO05D005629 2.5e-23 112.5 118 55.9
Aa31LG4G13040 Aethionema arabicum HOM05D004597 ORTHO05D005629 5.6e-23 111.3 106 58.5
MSTRG.26494 Avicennia marina HOM05D004597 ORTHO05D005629 5.6e-23 111.3 105 57.1
MD15G1222600 Malus domestica HOM05D004597 ORTHO05D005629 5.6e-23 111.3 119 52.9
THA.LOC104815073 Tarenaya hassleriana HOM05D004597 ORTHO05D005629 5.6e-23 111.3 119 54.6
Lsat_1_v5_gn_5_139160 Lactuca sativa HOM05D004597 ORTHO05D005629 1.6e-22 109.8 117 55.6
PSO104G0043 Papaver somniferum HOM05D004597 ORTHO05D005629 1.6e-22 109.8 113 54.9
Ca_21333_v3 Cicer arietinum L. HOM05D004597 ORTHO05D005629 2.8e-22 109.0 111 55.0
Ca_30964_v3 Cicer arietinum L. HOM05D004597 ORTHO05D005629 2.8e-22 109.0 111 55.0
PSO421G0482 Papaver somniferum HOM05D004597 ORTHO05D005629 3.7e-22 108.6 114 53.5
HanXRQChr12g0354281 Helianthus annuus HOM05D004597 ORTHO05D005629 4.8e-22 108.2 114 56.1
Aqoxy7G00987 Aquilegia oxysepala HOM05D004597 ORTHO05D005629 6.2e-22 107.8 118 54.2
arahy.Tifrunner.gnm1.ann1.4N6INR Arachis hypogaea HOM05D004597 ORTHO05D005629 6.2e-22 107.8 120 53.3
arahy.Tifrunner.gnm1.ann1.4YLW35 Arachis hypogaea HOM05D004597 ORTHO05D005629 6.2e-22 107.8 120 53.3
CDE11G0438 Ceratophyllum demersum HOM05D004597 ORTHO05D005629 1.1e-21 107.1 102 55.9
arahy.Tifrunner.gnm1.ann1.2G0Z8B Arachis hypogaea HOM05D004597 ORTHO05D005629 1.4e-21 106.7 119 52.1
CDE05G1003 Ceratophyllum demersum HOM05D004597 ORTHO05D005629 1.4e-21 106.7 107 56.1
Medtr4g124790 Medicago truncatula HOM05D004597 ORTHO05D005629 1.4e-21 106.7 120 52.5
arahy.Tifrunner.gnm1.ann1.SJ1504 Arachis hypogaea HOM05D004597 ORTHO05D005629 2.4e-21 105.9 119 51.3
ATR0681G150 Amborella trichopoda HOM05D004597 ORTHO05D005629 4.0e-21 105.1 119 55.5
Psat4g018640 Pisum sativum HOM05D004597 ORTHO05D005629 5.3e-21 104.8 117 53.0
Lj4g0020079 Lotus japonicus HOM05D004597 ORTHO05D005629 1.5e-20 103.2 80 65.0
Lalb_Chr13g0299251 Lupinus albus HOM05D004597 ORTHO05D005629 2.0e-20 102.8 120 50.8
Thhalv10021501m.g Eutrema salsugineum HOM05D004597 ORTHO05D005629 3.4e-20 102.1 115 52.2
Cpa.g.sc82.76 Carica papaya HOM05D004597 ORTHO05D005629 1.0e-19 100.5 118 54.2
TPR.G12546 Trifolium pratense HOM05D004597 ORTHO05D005629 1.3e-19 100.1 123 51.2
Zm00001eb278510 Zea mays HOM05D004597 ORTHO05D005629 8.4e-19 97.4 102 48.0
CARHR147050 Cardamine hirsuta HOM05D004597 ORTHO05D005629 1.1e-18 97.1 118 50.8
SEGI_12051 Sequoiadendron giganteum HOM05D004597 ORTHO05D005629 1.4e-18 96.7 118 44.9
MELO3C030723.2 Cucumis melo HOM05D004597 ORTHO05D005629 3.2e-18 95.5 84 60.7
ECA234G4331 Erigeron canadensis HOM05D004597 ORTHO05D005629 1.2e-17 93.6 81 60.5
THA.LOC104815153 Tarenaya hassleriana HOM05D004597 ORTHO05D005629 1.6e-17 93.2 110 48.2
Mapoly0033s0151 Marchantia polymorpha HOM05D004597 ORTHO05D005629 2.1e-17 92.8 79 58.2
Lj4A919T43 Lonicera japonica HOM05D004597 ORTHO05D005629 3.9e-16 88.6 47 80.9
Os06g0196300 Oryza sativa ssp. japonica HOM05D004597 ORTHO05D005629 3.9e-16 88.6 110 50.0
AL5G14740 Arabidopsis lyrata HOM05D004597 ORTHO05D005629 5.1e-16 88.2 118 46.6
Lsat_1_v5_gn_7_82541 Lactuca sativa HOM05D004597 ORTHO05D005629 5.1e-16 88.2 68 63.2
CSS0005573 Camellia sinensis var. sinensis HOM05D004597 ORTHO05D005629 8.7e-16 87.4 44 84.1
HPP92_019114 Vanilla planifolia HOM05D004597 ORTHO05D005629 8.7e-16 87.4 47 74.5
BcaB02g10783 Brassica carinata HOM05D004597 ORTHO05D005629 2.5e-15 85.9 82 56.1
Lsat_1_v5_gn_6_72620 Lactuca sativa HOM05D004597 ORTHO05D005629 2.5e-15 85.9 71 60.6
Sp5g18690 Schrenkiella parvula HOM05D004597 ORTHO05D005629 4.3e-15 85.1 118 44.1
AUR62025300 Chenopodium quinoa HOM05D004597 ORTHO05D005629 9.6e-15 84.0 47 74.5
BcaC01g02171 Brassica carinata HOM05D004597 ORTHO05D005629 3.7e-14 82.0 82 56.1
A06p23440 Brassica napus HOM05D004597 ORTHO05D005629 3.7e-14 82.0 82 56.1
C03p67930 Brassica napus HOM05D004597 ORTHO05D005629 3.7e-14 82.0 82 56.1
AT3G26060 Arabidopsis thaliana HOM05D004597 ORTHO05D005629 6.3e-14 81.3 118 44.1
Lsat_1_v5_gn_3_58180 Lactuca sativa HOM05D004597 ORTHO05D005629 6.3e-14 81.3 47 70.2
Prupe.1G206600 Prunus persica HOM05D004597 ORTHO05D005629 8.2e-14 80.9 86 52.3
Carub.0005s0392 Capsella rubella HOM05D004597 ORTHO05D005629 2.4e-13 79.3 118 44.9
BolC3t19018H Brassica oleracea HOM05D004597 ORTHO05D005629 4.1e-13 78.6 81 50.6
BraA06t25436Z Brassica rapa HOM05D004597 ORTHO05D005629 4.1e-13 78.6 81 50.6
SMO146G0055 Selaginella moellendorffii HOM05D004597 ORTHO05D005629 5.3e-13 78.2 49 67.3
unitig_22.g6577 Utricularia gibba HOM05D004597 ORTHO05D005629 6.9e-13 77.8 106 48.1
AagrBONN_evm.TU.Sc2ySwM_344.1889 Anthoceros agrestis HOM05D004597 ORTHO05D005629 2.6e-12 75.9 130 38.5
Pp3c10_380 Physcomitrium patens HOM05D004597 ORTHO05D005629 5.9e-12 74.7 47 61.7
Oeu055331.1 Olea europaea HOM05D004597 ORTHO05D005629 1.3e-11 73.6 113 48.7
Pp3c25_1840 Physcomitrium patens HOM05D004597 ORTHO05D005629 2.9e-11 72.4 118 37.3
Pp3c2_15400 Physcomitrium patens HOM05D004597 ORTHO05D005629 1.2e-09 67.0 51 54.9
Actinidia39624 Actinidia chinensis HOM05D004597 ORTHO05D005629 1.6e-09 66.6 75 60.0
SMO239G0145 Selaginella moellendorffii HOM05D004597 ORTHO05D005629 8.7e-08 60.8 48 50.0
PRCOL_00006100 Prasinoderma coloniale HOM05D004597 ORTHO05D005629 3.7e-06 55.5 47 53.2
Ca_28838_v3 Cicer arietinum L. HOM05D004597 ORTHO05D005629 8.2e-06 54.3 43 48.8


User provided reference genes

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