Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17078 Vaccinium macrocarpon HOM05D005951 ORTHO05D007025 5.3e-187 657.5 329 100.0
Dinv25506 Davidia involucrata HOM05D005951 ORTHO05D007025 8.4e-100 367.9 332 62.7
CSS0032580 Camellia sinensis var. sinensis HOM05D005951 ORTHO05D007025 1.1e-99 367.5 330 62.1
Gohir.A05G036100 Gossypium hirsutum HOM05D005951 ORTHO05D007025 3.2e-99 365.9 320 63.8
Duzib168G0975 Durio zibethinus HOM05D005951 ORTHO05D007025 1.6e-98 363.6 329 62.9
Actinidia39617 Actinidia chinensis HOM05D005951 ORTHO05D007025 2.7e-98 362.8 326 63.2
Cpa.g.sc82.63 Carica papaya HOM05D005951 ORTHO05D007025 1.8e-97 360.1 332 61.4
Gorai.009G038100 Gossypium raimondii HOM05D005951 ORTHO05D007025 2.3e-97 359.8 320 62.8
ClCG03G014750 Citrullus lanatus HOM05D005951 ORTHO05D007025 5.1e-97 358.6 325 60.3
Oeu000276.3 Olea europaea HOM05D005951 ORTHO05D007025 1.1e-96 357.5 335 60.3
Potri.006G136500 Populus trichocarpa HOM05D005951 ORTHO05D007025 1.1e-96 357.5 330 61.2
Thecc.09G070300 Theobroma cacao HOM05D005951 ORTHO05D007025 1.1e-96 357.5 315 63.8
MD02G1102200 Malus domestica HOM05D005951 ORTHO05D007025 5.6e-96 355.1 321 60.4
QL11p002956 Quercus lobata HOM05D005951 ORTHO05D007025 7.4e-96 354.8 327 61.2
Aqoxy7G04154 Aquilegia oxysepala HOM05D005951 ORTHO05D007025 9.6e-96 354.4 329 61.1
Duzib150G0422 Durio zibethinus HOM05D005951 ORTHO05D007025 9.6e-96 354.4 326 61.0
Gohir.D05G037600 Gossypium hirsutum HOM05D005951 ORTHO05D007025 9.6e-96 354.4 320 62.2
TAR383G1060 Trochodendron aralioides HOM05D005951 ORTHO05D007025 1.3e-95 354.0 329 60.5
CsaV3_1G041410 Cucumis sativus L. HOM05D005951 ORTHO05D007025 2.1e-95 353.2 325 60.0
Sed0027227 Sechium edule HOM05D005951 ORTHO05D007025 2.1e-95 353.2 325 59.4
Atru.chr7.1767 Acer truncatum HOM05D005951 ORTHO05D007025 2.8e-95 352.8 329 60.2
FAN28G0037 Fragaria x ananassa HOM05D005951 ORTHO05D007025 2.8e-95 352.8 318 60.7
FAN28G0822 Fragaria x ananassa HOM05D005951 ORTHO05D007025 2.8e-95 352.8 318 60.7
Peaxi162Scf00474g00521 Petunia axillaris HOM05D005951 ORTHO05D007025 2.8e-95 352.8 321 59.5
RcHm_v2.0_Chr2g0095941 Rosa chinensis HOM05D005951 ORTHO05D007025 2.8e-95 352.8 320 59.7
Sabra06G0106700 Salix brachista HOM05D005951 ORTHO05D007025 3.7e-95 352.4 330 60.0
FvH4_1g09390 Fragaria vesca HOM05D005951 ORTHO05D007025 4.8e-95 352.1 318 60.7
FAN19G2090 Fragaria x ananassa HOM05D005951 ORTHO05D007025 4.8e-95 352.1 318 60.7
Nitab4.5_0000170g0090 Nicotiana tabacum HOM05D005951 ORTHO05D007025 4.8e-95 352.1 318 59.7
Prupe.7G192100 Prunus persica HOM05D005951 ORTHO05D007025 8.1e-95 351.3 325 59.1
GSVIVG01015014001 Vitis vinifera HOM05D005951 ORTHO05D007025 8.1e-95 351.3 320 60.9
FAN26G0600 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.4e-94 350.5 318 60.4
FAN26G2189 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.4e-94 350.5 318 60.1
Lj4g0000458 Lotus japonicus HOM05D005951 ORTHO05D007025 1.4e-94 350.5 321 59.2
Sed0006808 Sechium edule HOM05D005951 ORTHO05D007025 1.8e-94 350.1 325 58.8
CANSAT56G0193 Cannabis sativa HOM05D005951 ORTHO05D007025 2.4e-94 349.7 333 58.9
Glyma.17G045500 Glycine max HOM05D005951 ORTHO05D007025 3.1e-94 349.4 321 59.8
Nn6g35632 Nelumbo nucifera HOM05D005951 ORTHO05D007025 4.0e-94 349.0 329 60.2
VMungo1215G3086 Vigna mungo HOM05D005951 ORTHO05D007025 4.0e-94 349.0 326 59.2
CANSAT56G0116 Cannabis sativa HOM05D005951 ORTHO05D007025 5.3e-94 348.6 333 58.9
MD15G1223700 Malus domestica HOM05D005951 ORTHO05D007025 1.2e-93 347.4 323 59.4
FAN23G1113 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.5e-93 347.1 318 59.4
Glyma.13G114300 Glycine max HOM05D005951 ORTHO05D007025 2.0e-93 346.7 321 60.1
Potri.018G063600 Populus trichocarpa HOM05D005951 ORTHO05D007025 2.0e-93 346.7 333 58.9
Manes.16G090500 Manihot esculenta HOM05D005951 ORTHO05D007025 2.6e-93 346.3 335 60.3
CiPaw.03G200400 Carya illinoinensis HOM05D005951 ORTHO05D007025 3.4e-93 345.9 324 59.0
CiPaw.04G140200 Carya illinoinensis HOM05D005951 ORTHO05D007025 4.5e-93 345.5 324 58.6
Lsat_1_v5_gn_5_138841 Lactuca sativa HOM05D005951 ORTHO05D007025 4.5e-93 345.5 325 57.2
Cfa002937 Carpinus fangiana HOM05D005951 ORTHO05D007025 5.8e-93 345.1 315 61.3
Manes.03G044600 Manihot esculenta HOM05D005951 ORTHO05D007025 7.6e-93 344.7 329 58.7
arahy.Tifrunner.gnm1.ann1.7AU96Q Arachis hypogaea HOM05D005951 ORTHO05D007025 2.2e-92 343.2 321 59.2
arahy.Tifrunner.gnm1.ann1.JRQ3DB Arachis hypogaea HOM05D005951 ORTHO05D007025 2.2e-92 343.2 325 58.5
Phvul.003G127300 Phaseolus vulgaris HOM05D005951 ORTHO05D007025 4.9e-92 342.0 321 59.2
CAN.G54.13 Capsicum annuum HOM05D005951 ORTHO05D007025 8.4e-92 341.3 318 58.2
COL.COLO4_21208 Corchorus olitorius HOM05D005951 ORTHO05D007025 1.4e-91 340.5 329 59.9
Ca_21339_v3 Cicer arietinum L. HOM05D000240 ORTHO05D002721 1.9e-91 340.1 330 59.1
Medtr4g124640 Medicago truncatula HOM05D005951 ORTHO05D007025 1.9e-91 340.1 321 58.6
Cc06_g12700 Coffea canephora HOM05D005951 ORTHO05D007025 2.4e-91 339.7 326 58.6
PGSC0003DMG400013572 Solanum tuberosum HOM05D005951 ORTHO05D007025 2.4e-91 339.7 322 57.8
Solyc07g042570.3 Solanum lycopersicum HOM05D005951 ORTHO05D007025 4.2e-91 339.0 322 57.5
MSTRG.26500 Avicennia marina HOM05D005951 ORTHO05D007025 5.5e-91 338.6 323 58.2
Eucgr.C03197 Eucalyptus grandis HOM05D005951 ORTHO05D007025 5.5e-91 338.6 318 57.9
Eucgr.L02230 Eucalyptus grandis HOM05D005951 ORTHO05D007025 5.5e-91 338.6 318 57.9
Sopen07g022260 Solanum pennellii HOM05D005951 ORTHO05D007025 2.1e-90 336.7 322 56.8
Haze_26069 Corylus avellana HOM05D005951 ORTHO05D007025 3.5e-90 335.9 330 58.5
Lalb_Chr13g0299191 Lupinus albus HOM05D005951 ORTHO05D007025 3.5e-90 335.9 331 58.6
ATR0317G112 Amborella trichopoda HOM05D005951 ORTHO05D007025 4.6e-90 335.5 329 57.1
Ciclev10009369m.g Citrus clementina HOM05D005951 ORTHO05D007025 4.6e-90 335.5 325 58.5
TWI34G0930 Tripterygium wilfordii HOM05D005951 ORTHO05D007025 1.8e-89 333.6 321 58.6
Oeu041808.1 Olea europaea HOM05D005951 ORTHO05D007025 2.3e-89 333.2 322 56.8
MBI13_g01673_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 6.7e-89 331.6 327 57.5
SGA_v2.0_scaffold55G19875 Striga asiatica HOM05D005951 ORTHO05D007025 1.1e-88 330.9 321 58.9
DCAR_028530 Daucus carota HOM05D005951 ORTHO05D007025 4.3e-88 328.9 325 56.9
Migut.J00881 Erythranthe guttata HOM05D005951 ORTHO05D007025 5.6e-88 328.6 321 57.0
Lalb_Chr07g0181411 Lupinus albus HOM05D005951 ORTHO05D007025 9.6e-88 327.8 319 58.0
TPR.G12577 Trifolium pratense HOM05D005951 ORTHO05D007025 1.3e-87 327.4 320 57.5
PSO724G0923 Papaver somniferum HOM05D005951 ORTHO05D007025 3.7e-87 325.9 318 56.6
ECA234G1587 Erigeron canadensis HOM05D005951 ORTHO05D007025 4.8e-87 325.5 325 55.4
PSO135G0575 Papaver somniferum HOM05D005951 ORTHO05D007025 8.2e-87 324.7 318 56.6
EL10Ac8g18966 Beta vulgaris HOM05D005951 ORTHO05D007025 9.0e-86 321.2 320 55.3
Os03g0182700 Oryza sativa ssp. japonica HOM05D005951 ORTHO05D007025 2.6e-85 319.7 318 55.3
THA.LOC104803783 Tarenaya hassleriana HOM05D005951 ORTHO05D007025 2.6e-85 319.7 321 54.8
CDE07G2051 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 5.8e-85 318.5 330 54.2
AUR62028321 Chenopodium quinoa HOM05D005951 ORTHO05D007025 5.8e-85 318.5 311 56.3
MELO3C015553.2 Cucumis melo HOM05D005951 ORTHO05D007025 1.3e-84 317.4 325 55.7
Sp7g31000 Schrenkiella parvula HOM05D005951 ORTHO05D007025 2.2e-84 316.6 321 54.5
PGR044G1586 Punica granatum HOM05D005951 ORTHO05D007025 2.9e-84 316.2 321 56.7
BraA01t00476Z Brassica rapa HOM05D000526 ORTHO05D007025 3.8e-84 315.8 329 55.0
HPP92_004361 Vanilla planifolia HOM05D005951 ORTHO05D007025 3.8e-84 315.8 315 55.2
BcaC01g01000 Brassica carinata HOM05D005951 ORTHO05D007025 4.9e-84 315.5 320 54.7
BolC3t20971H Brassica oleracea HOM05D005951 ORTHO05D007025 4.9e-84 315.5 320 54.7
C01p05390 Brassica napus HOM05D000526 ORTHO05D000956 1.4e-83 313.9 320 55.6
AL7G18300 Arabidopsis lyrata HOM05D005951 ORTHO05D007025 2.5e-83 313.2 329 53.5
HanXRQChr10g0319821 Helianthus annuus HOM05D005951 ORTHO05D007025 2.5e-83 313.2 321 56.1
BolC1t00519H Brassica oleracea HOM05D000526 ORTHO05D007025 3.2e-83 312.8 320 55.3
BraA08t33722Z Brassica rapa HOM05D005951 ORTHO05D007025 4.2e-83 312.4 330 53.9
SEGI_21232 Sequoiadendron giganteum HOM05D005951 ORTHO05D007025 4.2e-83 312.4 329 52.6
Thhalv10026154m.g Eutrema salsugineum HOM05D005951 ORTHO05D007025 7.1e-83 311.6 320 54.4
Zm00001eb401690 Zea mays HOM05D005951 ORTHO05D007025 7.1e-83 311.6 318 54.7
BcaC09g52137 Brassica carinata HOM05D005951 ORTHO05D007025 9.3e-83 311.2 329 54.4
A08p17720 Brassica napus HOM05D005951 ORTHO05D007025 1.2e-82 310.8 321 54.2
C03p86770 Brassica napus HOM05D005951 ORTHO05D007025 1.2e-82 310.8 330 53.9
BcaB03g12809 Brassica carinata HOM05D005951 ORTHO05D007025 6.0e-82 308.5 329 52.0
Carub.0007s0721 Capsella rubella HOM05D005951 ORTHO05D007025 7.9e-82 308.1 325 52.6
Aa31LG5G9380 Aethionema arabicum HOM05D005951 ORTHO05D007025 3.9e-81 305.8 321 53.6
Rhsim05G0002100 Rhododendron simsii HOM05D005951 ORTHO05D007025 6.7e-81 305.1 334 56.0
AT4G33250 Arabidopsis thaliana HOM05D005951 ORTHO05D007025 5.7e-80 302.0 329 52.6
Actinidia30258 Actinidia chinensis HOM05D005951 ORTHO05D007025 2.8e-79 299.7 281 60.1
Nitab4.5_0003139g0080 Nicotiana tabacum HOM05D005951 ORTHO05D007025 2.8e-79 299.7 318 52.8
Lj7C692T6 Lonicera japonica HOM05D005951 ORTHO05D007025 3.7e-79 299.3 321 54.8
MBI19_g36230_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 2.4e-78 296.6 329 54.7
A03p61920 Brassica napus HOM05D000526 ORTHO05D007025 9.0e-78 294.7 346 49.7
unitig_899.g15181 Utricularia gibba HOM05D005951 ORTHO05D007025 1.5e-77 293.9 321 50.5
Mapoly0073s0056 Marchantia polymorpha HOM05D005951 ORTHO05D007025 4.2e-75 285.8 312 49.7
Hund26110 Selenicereus undatus HOM05D005951 ORTHO05D007025 3.0e-73 279.6 311 50.5
C07p59570 Brassica napus HOM05D005951 ORTHO05D007025 1.1e-70 271.2 329 48.6
BcaNung02163 Brassica carinata HOM05D005951 ORTHO05D007025 1.4e-70 270.8 329 48.3
AUR62025338 Chenopodium quinoa HOM05D005951 ORTHO05D007025 5.3e-70 268.9 286 52.4
Zm00001eb401710 Zea mays HOM05D005951 ORTHO05D007025 2.0e-69 266.9 292 51.7
Pp3c18_14720 Physcomitrium patens HOM05D005951 ORTHO05D007025 2.6e-69 266.5 309 46.6
Pp3c21_14860 Physcomitrium patens HOM05D005951 ORTHO05D007025 2.6e-69 266.5 309 46.3
SMO239G0051 Selaginella moellendorffii HOM05D005951 ORTHO05D007025 3.8e-68 262.7 321 44.9
BraA03t15230Z Brassica rapa HOM05D005951 ORTHO05D007025 5.0e-68 262.3 281 53.0
CDE06G1359 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 9.4e-67 258.1 292 52.4
Zm00001eb006150 Zea mays HOM05D005951 ORTHO05D007025 1.2e-58 231.1 262 50.0
BolC7t46402H Brassica oleracea HOM05D005951 ORTHO05D007025 2.6e-56 223.4 291 45.4
Migut.L01596 Erythranthe guttata HOM05D005951 ORTHO05D007025 7.4e-56 221.9 322 43.8
Sc08g0009170 Simmondsia chinensis HOM05D005951 ORTHO05D007025 5.3e-54 215.7 259 50.2
AagrBONN_evm.TU.Sc2ySwM_117.912 Anthoceros agrestis HOM05D005951 ORTHO05D007025 5.5e-43 179.1 243 43.2
CBR_g16046 Chara braunii HOM05D005951 ORTHO05D007025 3.4e-40 169.9 311 35.4
SalBow6G6500 Salvia bowleyana HOM05D005951 ORTHO05D007025 5.4e-38 162.5 98 83.7
CARHR241300 Cardamine hirsuta HOM05D005951 ORTHO05D007025 6.6e-36 155.6 150 52.0
MD02G1101200 Malus domestica HOM05D005951 ORTHO05D007025 1.9e-22 110.9 181 44.2
Cre12.g515650 Chlamydomonas reinhardtii HOM05D005951 ORTHO05D007025 2.4e-22 110.5 293 25.3
ATR0705G105 Amborella trichopoda HOM05D005951 ORTHO05D007025 3.6e-10 70.1 74 47.3
PRCOL_00003879 Prasinoderma coloniale HOM05D005951 ORTHO05D007025 1.1e-09 68.6 80 43.8


User provided reference genes

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