Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 2.4e-173 612.1 305 100.0
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 7.0e-133 477.6 346 74.9
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 1.6e-124 449.9 330 70.0
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 9.5e-122 440.7 329 69.6
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 5.6e-114 414.8 323 64.4
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 1.2e-113 413.7 322 64.6
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 1.2e-113 413.7 331 63.4
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 1.6e-113 413.3 298 70.1
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 2.8e-113 412.5 331 63.1
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 2.8e-113 412.5 323 63.2
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 2.8e-113 412.5 326 64.1
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 1.4e-112 410.2 321 65.1
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 1.7e-110 403.3 331 63.4
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 3.7e-110 402.1 322 63.0
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 6.4e-110 401.4 313 64.9
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 8.3e-110 401.0 315 63.8
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 1.1e-109 400.6 315 63.5
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.1e-109 400.6 315 63.5
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 5.4e-109 398.3 312 65.7
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 4.6e-108 395.2 348 60.6
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 5.9e-108 394.8 316 63.3
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 1.3e-107 393.7 318 62.9
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 6.6e-107 391.3 326 61.7
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 6.6e-107 391.3 318 62.3
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 8.6e-107 391.0 315 62.2
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 1.5e-106 390.2 317 62.8
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 4.3e-106 388.7 321 64.5
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 5.6e-106 388.3 318 62.3
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 7.3e-106 387.9 330 58.8
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 4.7e-105 385.2 315 61.6
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 6.2e-105 384.8 323 60.4
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 1.4e-104 383.6 314 61.1
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 1.4e-104 383.6 314 61.1
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 1.4e-104 383.6 325 61.8
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 1.8e-104 383.3 314 61.1
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 1.8e-104 383.3 314 61.8
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 2.3e-104 382.9 315 61.3
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 3.1e-104 382.5 329 59.6
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 4.0e-104 382.1 315 61.3
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 4.0e-104 382.1 343 56.9
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 4.0e-104 382.1 329 59.3
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 4.0e-104 382.1 321 62.3
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 5.2e-104 381.7 321 60.4
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 5.2e-104 381.7 326 61.7
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 5.2e-104 381.7 320 61.9
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 6.8e-104 381.3 338 58.3
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 1.5e-103 380.2 314 61.1
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 1.5e-103 380.2 328 58.2
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 2.0e-103 379.8 311 61.7
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 7.5e-103 377.9 334 57.5
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 9.8e-103 377.5 329 58.1
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 1.3e-102 377.1 319 60.8
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 1.7e-102 376.7 321 58.9
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 2.9e-102 375.9 322 58.7
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 2.9e-102 375.9 329 58.7
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 3.7e-102 375.6 322 60.2
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 4.9e-102 375.2 311 60.8
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 1.1e-101 374.0 328 57.3
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 1.9e-101 373.2 322 59.0
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 3.2e-101 372.5 335 56.4
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 7.0e-101 371.3 314 58.6
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 2.0e-100 369.8 331 58.3
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 2.7e-100 369.4 332 58.1
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 3.5e-100 369.0 340 56.5
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 7.8e-100 367.9 294 63.3
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 2.3e-99 366.3 329 57.1
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 5.0e-99 365.2 326 56.7
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 6.6e-99 364.8 324 59.9
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 2.5e-98 362.8 322 59.3
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 4.3e-98 362.1 285 65.3
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 5.6e-98 361.7 322 57.5
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 2.8e-97 359.4 289 61.6
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 4.7e-97 358.6 314 56.7
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 1.8e-96 356.7 313 57.8
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 1.2e-95 354.0 326 57.1
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 2.0e-95 353.2 336 54.2
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 2.6e-95 352.8 339 54.6
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 9.8e-95 350.9 316 57.6
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 2.9e-94 349.4 269 67.7
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 5.4e-93 345.1 343 53.4
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 9.2e-93 344.4 321 55.5
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 8.6e-91 337.8 315 55.2
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 1.1e-90 337.4 289 59.5
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 5.2e-88 328.6 256 68.8
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 1.9e-85 320.1 282 58.2
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 8.1e-81 304.7 297 52.9
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 2.4e-80 303.1 283 55.5
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 1.2e-79 300.8 250 62.0
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 3.4e-79 299.3 321 50.8
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 1.4e-77 293.9 310 47.7
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 5.4e-77 292.0 291 50.9
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 2.1e-73 280.0 244 60.7
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 8.1e-73 278.1 278 54.0
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 2.4e-72 276.6 323 44.0
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 1.5e-71 273.9 323 43.3
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 1.5e-71 273.9 323 43.3
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 1.1e-69 267.7 310 44.8
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.8e-67 260.4 311 43.7
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.5e-66 256.5 309 42.1
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 8.1e-65 251.5 328 41.5
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.1e-64 251.1 311 42.8
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 4.0e-64 249.2 319 44.2
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.5e-63 247.3 311 42.4
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.0e-63 246.9 308 41.2
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 1.8e-59 233.8 254 47.2
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 1.8e-59 233.8 232 53.4
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 1.0e-54 218.0 323 38.7
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 1.8e-40 170.6 213 42.7
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 1.3e-30 137.9 236 35.6
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 5.5e-29 132.5 285 32.6
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.4e-27 127.9 119 54.6
vmacro02767 Vaccinium macrocarpon HOM05D063291 ORTHO05D009028 1.2e-12 78.2 48 79.2
CSS0009651 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D112431 8.6e-06 55.5 61 59.0


User provided reference genes

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