Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16981 Vaccinium macrocarpon HOM05D006052 ORTHO05D007319 7.7e-61 236.9 113 100.0
CSS0026597 Camellia sinensis var. sinensis HOM05D006052 ORTHO05D007319 1.9e-43 179.1 96 89.6
Dinv37999 Davidia involucrata HOM05D006052 ORTHO05D007319 1.9e-43 179.1 96 88.5
Actinidia39148 Actinidia chinensis HOM05D006052 ORTHO05D007319 3.2e-43 178.3 96 88.5
Rhsim12G0201800 Rhododendron simsii HOM05D006052 ORTHO05D007319 2.1e-42 175.6 115 77.4
CANSAT56G3932 Cannabis sativa HOM05D006052 ORTHO05D007319 6.1e-42 174.1 93 87.1
Haze_16332 Corylus avellana HOM05D006052 ORTHO05D007319 1.8e-41 172.6 96 84.4
Dinv32171 Davidia involucrata HOM05D006052 ORTHO05D007319 5.2e-41 171.0 96 85.4
Manes.04G131832 Manihot esculenta HOM05D006052 ORTHO05D007319 6.8e-41 170.6 96 83.3
CSS0014721 Camellia sinensis var. sinensis HOM05D006052 ORTHO05D007319 3.4e-40 168.3 89 88.8
Hma1.2p1_1689F.1_g297700 Hydrangea macrophylla HOM05D006052 ORTHO05D007319 9.8e-40 166.8 88 87.5
Prupe.3G063000 Prunus persica HOM05D006052 ORTHO05D007319 9.8e-40 166.8 96 81.2
CAN.G203.53 Capsicum annuum HOM05D006052 ORTHO05D007319 4.8e-39 164.5 99 79.8
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 6.3e-39 164.1 103 72.8
Migut.I00924 Erythranthe guttata HOM05D006052 ORTHO05D007319 8.3e-39 163.7 90 83.3
Potri.001G187200 Populus trichocarpa HOM05D006052 ORTHO05D007319 1.1e-38 163.3 96 78.1
CiPaw.01G233600 Carya illinoinensis HOM05D006052 ORTHO05D007319 1.4e-38 162.9 95 78.9
RcHm_v2.0_Chr2g0139621 Rosa chinensis HOM05D006052 ORTHO05D007319 1.4e-38 162.9 96 79.2
MD17G1187600 Malus domestica HOM05D006052 ORTHO05D007319 1.8e-38 162.5 96 79.2
Thecc.06G096200 Theobroma cacao HOM05D006052 ORTHO05D007319 3.1e-38 161.8 96 77.1
HanXRQChr02g0032361 Helianthus annuus HOM05D006052 ORTHO05D007319 9.1e-38 160.2 88 84.1
EL10Ac9g22109 Beta vulgaris HOM05D006052 ORTHO05D007319 1.2e-37 159.8 107 70.1
Nn3g18169 Nelumbo nucifera HOM05D006052 ORTHO05D007319 1.6e-37 159.5 90 80.0
arahy.Tifrunner.gnm1.ann1.69I5GX Arachis hypogaea HOM05D006052 ORTHO05D007319 2.0e-37 159.1 96 78.1
arahy.Tifrunner.gnm1.ann1.S0BGA2 Arachis hypogaea HOM05D006052 ORTHO05D007319 2.0e-37 159.1 96 78.1
Peaxi162Scf00038g00824 Petunia axillaris HOM05D006052 ORTHO05D007319 2.0e-37 159.1 94 80.9
arahy.Tifrunner.gnm1.ann1.NZ5FDW Arachis hypogaea HOM05D006052 ORTHO05D007319 2.7e-37 158.7 95 77.9
Solyc03g120820.4 Solanum lycopersicum HOM05D006052 ORTHO05D007319 2.7e-37 158.7 92 79.3
Solyc12g044380.3 Solanum lycopersicum HOM05D006052 ORTHO05D007319 2.7e-37 158.7 90 82.2
Sopen12g022650 Solanum pennellii HOM05D006052 ORTHO05D007319 2.7e-37 158.7 90 82.2
PGSC0003DMG400026453 Solanum tuberosum HOM05D006052 ORTHO05D007319 2.7e-37 158.7 90 82.2
TAR626G0898 Trochodendron aralioides HOM05D006052 ORTHO05D007319 2.7e-37 158.7 90 82.2
TAR636G2101 Trochodendron aralioides HOM05D006052 ORTHO05D007319 2.7e-37 158.7 90 82.2
Nitab4.5_0003039g0060 Nicotiana tabacum HOM05D006052 ORTHO05D007319 3.5e-37 158.3 88 83.0
DCAR_026339 Daucus carota HOM05D006052 ORTHO05D007319 5.9e-37 157.5 87 83.9
FAN14G5158 Fragaria x ananassa HOM05D002582 ORTHO05D002781 5.9e-37 157.5 93 79.6
MBI04_g27065_MAGBIO Magnolia biondii HOM05D006052 ORTHO05D007319 5.9e-37 157.5 88 80.7
MSTRG.22652 Avicennia marina HOM05D006052 ORTHO05D007319 7.7e-37 157.1 94 78.7
FAN02G3299 Fragaria x ananassa HOM05D006052 ORTHO05D007319 7.7e-37 157.1 96 78.1
Nitab4.5_0007758g0100 Nicotiana tabacum HOM05D006052 ORTHO05D007319 7.7e-37 157.1 89 80.9
PGSC0003DMG402002538 Solanum tuberosum HOM05D006052 ORTHO05D007319 7.7e-37 157.1 92 82.6
Gohir.A05G128200 Gossypium hirsutum HOM05D006052 ORTHO05D007319 1.0e-36 156.8 89 78.7
SGA_v2.0_scaffold69G23334 Striga asiatica HOM05D006052 ORTHO05D007319 1.0e-36 156.8 87 82.8
PGR102G0387 Punica granatum HOM05D006052 ORTHO05D007319 1.3e-36 156.4 95 77.9
Ciclev10026826m.g Citrus clementina HOM05D006052 ORTHO05D007319 1.7e-36 156.0 95 76.8
Cc04_g02780 Coffea canephora HOM05D006052 ORTHO05D007319 1.7e-36 156.0 84 85.7
Eucgr.F03060 Eucalyptus grandis HOM05D006052 ORTHO05D007319 2.2e-36 155.6 93 77.4
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 2.9e-36 155.2 105 69.5
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 2.9e-36 155.2 93 78.5
Glyma.08G202700 Glycine max HOM05D006052 ORTHO05D007319 3.8e-36 154.8 96 76.0
Gohir.D05G132700 Gossypium hirsutum HOM05D006052 ORTHO05D007319 3.8e-36 154.8 89 77.5
Gorai.009G136400 Gossypium raimondii HOM05D006052 ORTHO05D007319 3.8e-36 154.8 89 77.5
Medtr3g112340 Medicago truncatula HOM05D006052 ORTHO05D007319 3.8e-36 154.8 95 75.8
Sc15g0001990 Simmondsia chinensis HOM05D006052 ORTHO05D007319 3.8e-36 154.8 92 75.0
Phvul.010G146800 Phaseolus vulgaris HOM05D006052 ORTHO05D007319 6.5e-36 154.1 95 74.7
TWI18G1030 Tripterygium wilfordii HOM05D006052 ORTHO05D007319 1.1e-35 153.3 92 76.1
Glyma.07G017500 Glycine max HOM05D006052 ORTHO05D007319 2.5e-35 152.1 95 74.7
Medtr8g013760 Medicago truncatula HOM05D006052 ORTHO05D007319 2.5e-35 152.1 95 74.7
PSO566G0324 Papaver somniferum HOM05D006052 ORTHO05D007319 2.5e-35 152.1 93 76.3
CsaV3_7G033550 Cucumis sativus L. HOM05D006052 ORTHO05D007319 3.2e-35 151.8 90 76.7
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 3.2e-35 151.8 93 75.3
ECA232G3158 Erigeron canadensis HOM05D006052 ORTHO05D007319 4.2e-35 151.4 88 80.7
HanXRQChr16g0501261 Helianthus annuus HOM05D006052 ORTHO05D007319 4.2e-35 151.4 93 76.3
Thhalv10019223m.g Eutrema salsugineum HOM05D006052 ORTHO05D007319 5.5e-35 151.0 102 65.7
ClCG09G001790 Citrullus lanatus HOM05D006052 ORTHO05D007319 7.2e-35 150.6 88 77.3
Lalb_Chr01g0013101 Lupinus albus HOM05D006052 ORTHO05D007319 1.2e-34 149.8 96 74.0
Lalb_Chr01g0013121 Lupinus albus HOM05D006052 ORTHO05D007319 1.2e-34 149.8 96 74.0
TPR.G14815 Trifolium pratense HOM05D006052 ORTHO05D007319 1.2e-34 149.8 95 73.7
unitig_748.g8097 Utricularia gibba HOM05D003052 ORTHO05D007319 1.2e-34 149.8 89 77.5
VMungo1309G2952 Vigna mungo HOM05D006052 ORTHO05D007319 1.2e-34 149.8 93 74.2
AUR62022170 Chenopodium quinoa HOM05D006052 ORTHO05D007319 2.1e-34 149.1 92 75.0
HPP92_024167 Vanilla planifolia HOM05D006052 ORTHO05D007319 2.8e-34 148.7 99 70.7
PSO782G5494 Papaver somniferum HOM05D006052 ORTHO05D007319 3.6e-34 148.3 93 75.3
Eucgr.E01716 Eucalyptus grandis HOM05D006052 ORTHO05D007319 6.1e-34 147.5 95 71.6
CARHR062820 Cardamine hirsuta HOM05D006052 ORTHO05D007319 1.0e-33 146.7 96 66.7
TWI12G0943 Tripterygium wilfordii HOM05D006052 ORTHO05D007319 1.0e-33 146.7 96 70.8
AUR62031876 Chenopodium quinoa HOM05D006052 ORTHO05D007319 1.4e-33 146.4 92 73.9
Carub.0002s1643 Capsella rubella HOM05D006052 ORTHO05D007319 1.8e-33 146.0 93 67.7
CDE02G2125 Ceratophyllum demersum HOM05D006052 ORTHO05D007319 1.8e-33 146.0 89 75.3
Sed0023726 Sechium edule HOM05D006052 ORTHO05D007319 1.8e-33 146.0 76 85.5
Zm00001eb295530 Zea mays HOM05D006052 ORTHO05D007319 1.8e-33 146.0 93 73.1
AL2G28930 Arabidopsis lyrata HOM05D006052 ORTHO05D007319 3.0e-33 145.2 93 67.7
AT1G66590 Arabidopsis thaliana HOM05D006052 ORTHO05D007319 5.2e-33 144.4 93 67.7
AT1G69750 Arabidopsis thaliana HOM05D006052 ORTHO05D007319 5.2e-33 144.4 93 67.7
Zm00001eb002070 Zea mays HOM05D006052 ORTHO05D007319 5.2e-33 144.4 76 84.2
QL05p021035 Quercus lobata HOM05D006052 ORTHO05D007319 6.8e-33 144.1 118 61.0
GSVIVG01017036001 Vitis vinifera HOM05D006052 ORTHO05D007319 6.8e-33 144.1 96 71.9
BcaB03g14752 Brassica carinata HOM05D006052 ORTHO05D007319 8.8e-33 143.7 93 67.7
CDE08G0656 Ceratophyllum demersum HOM05D006052 ORTHO05D007319 8.8e-33 143.7 86 76.7
Lj3g0026702 Lotus japonicus HOM05D006052 ORTHO05D007319 1.5e-32 142.9 76 80.3
Sp5g24870 Schrenkiella parvula HOM05D006052 ORTHO05D007319 3.4e-32 141.7 93 66.7
THA.LOC104800715 Tarenaya hassleriana HOM05D006052 ORTHO05D007319 5.7e-32 141.0 86 73.3
A07p36160 Brassica napus HOM05D006052 ORTHO05D007319 9.8e-32 140.2 96 64.6
C06p43560 Brassica napus HOM05D006052 ORTHO05D007319 9.8e-32 140.2 93 65.6
BolC6t39428H Brassica oleracea HOM05D006052 ORTHO05D007319 9.8e-32 140.2 93 65.6
BraA07t31192Z Brassica rapa HOM05D006052 ORTHO05D007319 9.8e-32 140.2 96 64.6
BcaB03g15501 Brassica carinata HOM05D006052 ORTHO05D007319 2.2e-31 139.0 76 78.9
AL1G38650 Arabidopsis lyrata HOM05D006052 ORTHO05D007319 4.9e-31 137.9 89 69.7
BcaC03g15114 Brassica carinata HOM05D006052 ORTHO05D007319 1.4e-30 136.3 81 71.6
BolC2t08748H Brassica oleracea HOM05D006052 ORTHO05D007319 1.4e-30 136.3 81 71.6
SalBow6G3458 Salvia bowleyana HOM05D006052 ORTHO05D007319 3.1e-30 135.2 66 89.4
Aa31LG7G8230 Aethionema arabicum HOM05D006052 ORTHO05D007319 7.0e-30 134.0 77 75.3
QL05p020889 Quercus lobata HOM05D006052 ORTHO05D007319 1.2e-29 133.3 83 72.3
A07p31390 Brassica napus HOM05D006052 ORTHO05D007319 1.6e-29 132.9 86 67.4
BraA07t30774Z Brassica rapa HOM05D006052 ORTHO05D007319 1.6e-29 132.9 86 67.4
arahy.Tifrunner.gnm1.ann1.Q44M57 Arachis hypogaea HOM05D006052 ORTHO05D007319 5.0e-28 127.9 67 79.1
C02p26750 Brassica napus HOM05D006052 ORTHO05D007319 8.6e-28 127.1 88 63.6
Oeu063940.2 Olea europaea HOM05D004680 ORTHO05D007319 1.2e-26 123.2 66 80.3
Mapoly0075s0024 Marchantia polymorpha HOM05D006052 ORTHO05D007319 1.6e-26 122.9 87 65.5
Psat4g197560 Pisum sativum HOM05D006052 ORTHO05D007319 1.6e-26 122.9 63 84.1
SEGI_14426 Sequoiadendron giganteum HOM05D006052 ORTHO05D007319 1.5e-24 116.3 69 76.8
Nitab4.5_0001315g0290 Nicotiana tabacum HOM05D006052 ORTHO05D007319 2.6e-24 115.5 84 70.2
vmacro16174 Vaccinium macrocarpon HOM05D006052 ORTHO05D007319 2.6e-24 115.5 61 91.8
SMO271G0187 Selaginella moellendorffii HOM05D006052 ORTHO05D007319 4.4e-24 114.8 87 58.6
RcHm_v2.0_Chr5g0082611 Rosa chinensis HOM05D006052 ORTHO05D007319 2.9e-23 112.1 64 75.0
Pp3c14_6840 Physcomitrium patens HOM05D006052 ORTHO05D007319 1.8e-22 109.4 74 63.5
Nitab4.5_0008606g0020 Nicotiana tabacum HOM05D006052 ORTHO05D007319 7.0e-22 107.5 52 88.5
RcHm_v2.0_Chr5g0082321 Rosa chinensis HOM05D006052 ORTHO05D007319 9.2e-22 107.1 64 71.9
MD09G1206900 Malus domestica HOM05D006052 ORTHO05D007319 1.2e-21 106.7 88 59.1
Atru.ctg114.13 Acer truncatum HOM05D006052 ORTHO05D007319 2.7e-21 105.5 63 69.8
AagrBONN_evm.TU.Sc2ySwM_344.4288 Anthoceros agrestis HOM05D006052 ORTHO05D007319 2.7e-21 105.5 86 58.1
RcHm_v2.0_Chr4g0404221 Rosa chinensis HOM05D006052 ORTHO05D007319 5.9e-21 104.4 62 72.6
MELO3C024266.2 Cucumis melo HOM05D006052 ORTHO05D007319 1.3e-20 103.2 66 72.7
CBR_g27938 Chara braunii HOM05D006052 ORTHO05D007319 3.9e-20 101.7 100 51.0
BraA02t06670Z Brassica rapa HOM05D006052 ORTHO05D007319 5.0e-20 101.3 63 66.7
Lsat_1_v5_gn_1_34740 Lactuca sativa HOM05D006052 ORTHO05D007319 5.0e-20 101.3 68 70.6
A02p16100 Brassica napus HOM05D006052 ORTHO05D007319 3.3e-19 98.6 66 62.1
Manes.11G036000 Manihot esculenta HOM05D006052 ORTHO05D007319 2.0e-16 89.4 61 65.6
Nn2g12137 Nelumbo nucifera HOM05D006052 ORTHO05D007319 1.7e-15 86.3 55 70.9
Sp2g00570 Schrenkiella parvula HOM05D006052 ORTHO05D007319 6.4e-15 84.3 63 61.9
Cre10.g454550 Chlamydomonas reinhardtii HOM05D006052 ORTHO05D007319 1.4e-14 83.2 76 48.7
MCO15G075 Micromonas commoda HOM05D006052 ORTHO05D007319 1.4e-14 83.2 82 50.0
PRCOL_00001792 Prasinoderma coloniale HOM05D006052 ORTHO05D007319 4.1e-14 81.6 92 44.6
Cfa026674 Carpinus fangiana HOM05D006052 ORTHO05D007319 4.3e-11 71.6 76 46.1
TPR.G20406 Trifolium pratense HOM05D006052 ORTHO05D007319 1.2e-10 70.1 30 93.3
CBR_g29697 Chara braunii HOM05D035488 ORTHO05D007319 2.0e-08 62.8 67 46.3


User provided reference genes

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