Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16923 Vaccinium macrocarpon HOM05D006471 ORTHO05D008157 3.3e-206 721.5 358 100.0
Rhsim12G0193800 Rhododendron simsii HOM05D006471 ORTHO05D008157 2.8e-141 505.8 276 89.5
Actinidia04343 Actinidia chinensis HOM05D006471 ORTHO05D008157 9.1e-124 447.6 274 80.7
CSS0032634 Camellia sinensis var. sinensis HOM05D006471 ORTHO05D008157 4.2e-121 438.7 273 78.8
CSS0035224 Camellia sinensis var. sinensis HOM05D006471 ORTHO05D008157 3.6e-120 435.6 273 78.0
Dinv17647 Davidia involucrata HOM05D000200 ORTHO05D001546 6.5e-114 414.8 280 75.7
Lj3A846G60 Lonicera japonica HOM05D006471 ORTHO05D008157 5.2e-111 405.2 271 72.0
DCAR_002605 Daucus carota HOM05D000200 ORTHO05D001546 2.8e-109 399.4 272 74.3
Hma1.2p1_0044F.1_g026290 Hydrangea macrophylla HOM05D006471 ORTHO05D008157 1.4e-108 397.1 279 71.7
PGSC0003DMG400011512 Solanum tuberosum HOM05D006471 ORTHO05D008157 4.1e-108 395.6 276 70.7
Sopen04g004170 Solanum pennellii HOM05D006471 ORTHO05D008157 1.2e-107 394.0 276 70.7
Solyc04g008990.3 Solanum lycopersicum HOM05D006471 ORTHO05D008157 7.7e-107 391.3 273 70.7
CAN.G274.15 Capsicum annuum HOM05D006471 ORTHO05D008157 1.0e-106 391.0 276 70.3
GSVIVG01034416001 Vitis vinifera HOM05D006471 ORTHO05D008157 1.0e-106 391.0 282 70.2
Peaxi162Scf00681g00221 Petunia axillaris HOM05D006471 ORTHO05D008157 7.2e-105 384.8 277 70.0
Ciclev10031833m.g Citrus clementina HOM05D006471 ORTHO05D008157 9.4e-105 384.4 280 68.2
Duzib248G0471 Durio zibethinus HOM05D000200 ORTHO05D001546 1.6e-104 383.6 278 68.0
Nitab4.5_0004979g0070 Nicotiana tabacum HOM05D006471 ORTHO05D008157 1.6e-104 383.6 255 73.7
CiPaw.05G172000 Carya illinoinensis HOM05D006471 ORTHO05D008157 2.1e-104 383.3 272 68.8
Nitab4.5_0005997g0050 Nicotiana tabacum HOM05D006471 ORTHO05D008157 1.4e-103 380.6 255 73.3
Haze_11788 Corylus avellana HOM05D006471 ORTHO05D008157 1.8e-103 380.2 276 68.8
MSTRG.428 Avicennia marina HOM05D006471 ORTHO05D008157 8.8e-103 377.9 274 68.6
Potri.007G075500 Populus trichocarpa HOM05D006471 ORTHO05D008157 8.8e-103 377.9 276 69.6
Cfa008776 Carpinus fangiana HOM05D006471 ORTHO05D008157 2.0e-102 376.7 276 68.1
Eucgr.G02586 Eucalyptus grandis HOM05D006471 ORTHO05D008157 2.6e-102 376.3 276 65.9
Nn8g40194 Nelumbo nucifera HOM05D006471 ORTHO05D008157 9.8e-102 374.4 270 68.5
SalBow2G1748 Salvia bowleyana HOM05D006471 ORTHO05D008157 1.7e-101 373.6 275 69.5
Sabra07G0063800 Salix brachista HOM05D006471 ORTHO05D008157 2.2e-101 373.2 276 69.2
Atru.chr11.1240 Acer truncatum HOM05D006471 ORTHO05D008157 2.8e-101 372.9 281 66.9
Gorai.012G135400 Gossypium raimondii HOM05D006471 ORTHO05D008157 2.8e-101 372.9 281 65.5
MSTRG.8091 Avicennia marina HOM05D006471 ORTHO05D008157 3.7e-101 372.5 275 67.6
CANSAT78G1799 Cannabis sativa HOM05D006471 ORTHO05D008157 3.7e-101 372.5 279 65.6
HanXRQChr03g0076951 Helianthus annuus HOM05D006471 ORTHO05D008157 3.7e-101 372.5 275 67.6
RcHm_v2.0_Chr4g0446941 Rosa chinensis HOM05D006471 ORTHO05D008157 3.7e-101 372.5 284 66.2
TAR628G0373 Trochodendron aralioides HOM05D006471 ORTHO05D008157 4.8e-101 372.1 274 67.2
COL.COLO4_33107 Corchorus olitorius HOM05D006471 ORTHO05D008157 8.3e-101 371.3 278 66.2
Gohir.D04G148900 Gossypium hirsutum HOM05D006471 ORTHO05D008157 1.1e-100 370.9 281 65.1
Thecc.02G154800 Theobroma cacao HOM05D006471 ORTHO05D008157 1.4e-100 370.5 278 68.0
Gohir.A04G109424 Gossypium hirsutum HOM05D006471 ORTHO05D008157 2.4e-100 369.8 281 65.1
Manes.04G162800 Manihot esculenta HOM05D006471 ORTHO05D008157 3.1e-100 369.4 277 66.4
Migut.L00869 Erythranthe guttata HOM05D006471 ORTHO05D008157 4.1e-100 369.0 278 67.3
MD16G1004200 Malus domestica HOM05D006471 ORTHO05D008157 4.1e-100 369.0 284 65.1
Thhalv10013886m.g Eutrema salsugineum HOM05D006471 ORTHO05D008157 5.4e-100 368.6 273 65.6
FvH4_4g37140 Fragaria vesca HOM05D006471 ORTHO05D008157 1.6e-99 367.1 281 65.8
Duzib132G0448 Durio zibethinus HOM05D006471 ORTHO05D008157 4.5e-99 365.5 278 65.8
SGA_v2.0_scaffold92G28263 Striga asiatica HOM05D006471 ORTHO05D008157 5.9e-99 365.2 283 64.3
Glyma.10G286400 Glycine max HOM05D006471 ORTHO05D008157 1.0e-98 364.4 300 63.7
TWI74G1585 Tripterygium wilfordii HOM05D006471 ORTHO05D008157 2.3e-98 363.2 281 66.9
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 6.5e-98 361.7 255 70.6
TWI77G0721 Tripterygium wilfordii HOM05D006471 ORTHO05D008157 1.1e-97 360.9 282 67.7
Sc10g0006980 Simmondsia chinensis HOM05D006471 ORTHO05D008157 1.9e-97 360.1 274 65.7
CARHR204730 Cardamine hirsuta HOM05D006471 ORTHO05D008157 2.5e-97 359.8 275 64.7
MBI06_g44273_MAGBIO Magnolia biondii HOM05D006471 ORTHO05D008157 2.5e-97 359.8 279 65.9
Phvul.007G014500 Phaseolus vulgaris HOM05D006471 ORTHO05D008157 4.2e-97 359.0 300 63.0
Medtr1g114560 Medicago truncatula HOM05D006471 ORTHO05D008157 5.5e-97 358.6 283 65.4
Ca_11258_v3 Cicer arietinum L. HOM05D000200 ORTHO05D001546 7.2e-97 358.2 277 65.7
Lalb_Chr06g0163931 Lupinus albus HOM05D006471 ORTHO05D008157 7.2e-97 358.2 285 65.6
Sp6g34600 Schrenkiella parvula HOM05D006471 ORTHO05D008157 1.2e-96 357.5 271 64.6
TPR.G4059 Trifolium pratense HOM05D006471 ORTHO05D008157 2.1e-96 356.7 277 65.0
AL6G18780 Arabidopsis lyrata HOM05D006471 ORTHO05D008157 3.6e-96 355.9 271 64.6
BcaB01g05611 Brassica carinata HOM05D006471 ORTHO05D008157 3.6e-96 355.9 271 65.7
AUR62032950 Chenopodium quinoa HOM05D006471 ORTHO05D008157 4.7e-96 355.5 274 63.5
Sed0003381 Sechium edule HOM05D006471 ORTHO05D008157 6.1e-96 355.1 274 65.0
Lsat_1_v5_gn_0_15460 Lactuca sativa HOM05D006471 ORTHO05D008157 8.0e-96 354.8 278 64.7
VMungo0720G2382 Vigna mungo HOM05D006471 ORTHO05D008157 1.0e-95 354.4 300 62.7
CsaV3_5G029010 Cucumis sativus L. HOM05D006471 ORTHO05D008157 1.8e-95 353.6 274 65.3
PSO782G0560 Papaver somniferum HOM05D006471 ORTHO05D008157 1.8e-95 353.6 273 63.4
BcaB01g05607 Brassica carinata HOM05D006471 ORTHO05D008157 4.0e-95 352.4 271 65.7
Carub.0006s0724 Capsella rubella HOM05D006471 ORTHO05D008157 4.0e-95 352.4 270 64.8
Aqoxy2G01235 Aquilegia oxysepala HOM05D006471 ORTHO05D008157 5.2e-95 352.1 274 65.0
PSO170G1614 Papaver somniferum HOM05D006471 ORTHO05D008157 5.2e-95 352.1 273 63.0
Psat6g234000 Pisum sativum HOM05D006471 ORTHO05D008157 6.8e-95 351.7 300 60.7
arahy.Tifrunner.gnm1.ann1.EW69V8 Arachis hypogaea HOM05D006471 ORTHO05D008157 8.9e-95 351.3 252 70.6
Cpa.g.sc60.91 Carica papaya HOM05D006471 ORTHO05D008157 8.9e-95 351.3 256 69.9
AUR62017731 Chenopodium quinoa HOM05D006471 ORTHO05D008157 8.9e-95 351.3 274 62.4
PGR142G1667 Punica granatum HOM05D006471 ORTHO05D008157 8.9e-95 351.3 276 65.2
Lj5g0013377 Lotus japonicus HOM05D006471 ORTHO05D008157 1.5e-94 350.5 300 62.0
Aa31LG3G18230 Aethionema arabicum HOM05D006471 ORTHO05D005636 2.0e-94 350.1 275 63.3
A03p03780 Brassica napus HOM05D006471 ORTHO05D008157 2.6e-94 349.7 272 65.1
BraA03t09725Z Brassica rapa HOM05D006471 ORTHO05D008157 2.6e-94 349.7 272 65.1
SGA_v2.0_scaffold580G53041 Striga asiatica HOM05D006471 ORTHO05D004488 3.4e-94 349.4 282 63.8
C03p04260 Brassica napus HOM05D006471 ORTHO05D008157 9.8e-94 347.8 272 65.4
BolC3t12958H Brassica oleracea HOM05D006471 ORTHO05D008157 9.8e-94 347.8 272 65.4
AT5G08340 Arabidopsis thaliana HOM05D006471 ORTHO05D008157 1.7e-93 347.1 271 63.5
CARHR190210 Cardamine hirsuta HOM05D006471 ORTHO05D008157 1.7e-93 347.1 278 62.2
EL10Ac9g22981 Beta vulgaris HOM05D006471 ORTHO05D008157 8.3e-93 344.7 274 62.4
Aqoxy2G00030 Aquilegia oxysepala HOM05D006471 ORTHO05D008157 1.1e-92 344.4 274 63.1
Nn2g12513 Nelumbo nucifera HOM05D006471 ORTHO05D008157 9.2e-92 341.3 276 60.9
AL6G34590 Arabidopsis lyrata HOM05D006471 ORTHO05D008157 1.2e-91 340.9 279 61.3
Oeu006329.1 Olea europaea HOM05D006471 ORTHO05D008157 1.2e-91 340.9 276 63.4
SGA_v2.0_scaffold42G16129 Striga asiatica HOM05D006471 ORTHO05D008157 1.6e-91 340.5 337 54.9
AT5G23330 Arabidopsis thaliana HOM05D006471 ORTHO05D008157 2.7e-91 339.7 277 61.0
ClCG02G014150 Citrullus lanatus HOM05D006471 ORTHO05D008157 3.5e-91 339.3 311 57.9
Ah.16g106450 Amaranthus hybridus HOM05D000154 ORTHO05D000092 1.7e-90 337.0 276 60.5
THA.LOC104818378 Tarenaya hassleriana HOM05D006471 ORTHO05D008157 8.6e-90 334.7 280 60.4
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 2.5e-89 333.2 263 63.1
THA.LOC104800739 Tarenaya hassleriana HOM05D006471 ORTHO05D008157 2.5e-89 333.2 277 60.6
unitig_749.g13340 Utricularia gibba HOM05D006471 ORTHO05D008157 3.3e-89 332.8 275 62.5
CDE02G4670 Ceratophyllum demersum HOM05D006471 ORTHO05D008157 1.2e-88 330.9 278 59.0
ECA240G3241 Erigeron canadensis HOM05D006471 ORTHO05D008157 3.6e-88 329.3 232 67.7
FAN17G0671 Fragaria x ananassa HOM05D006471 ORTHO05D008157 3.6e-88 329.3 261 64.8
ATR0665G473 Amborella trichopoda HOM05D006471 ORTHO05D008157 1.0e-87 327.8 274 60.9
Cc00_g09970 Coffea canephora HOM05D006471 ORTHO05D008157 1.0e-87 327.8 274 62.8
FAN07G1501 Fragaria x ananassa HOM05D002605 ORTHO05D002842 1.2e-86 324.3 255 65.1
Os03g0801700 Oryza sativa ssp. japonica HOM05D006471 ORTHO05D008157 1.7e-85 320.5 274 57.3
arahy.Tifrunner.gnm1.ann1.V4ETXF Arachis hypogaea HOM05D006471 ORTHO05D008157 2.9e-85 319.7 352 52.6
Prupe.1G349200 Prunus persica HOM05D006471 ORTHO05D008157 1.4e-84 317.4 240 64.6
MELO3C011756.2 Cucumis melo HOM05D006471 ORTHO05D008157 4.1e-84 315.8 366 49.2
Zm00001eb061200 Zea mays HOM05D006471 ORTHO05D008157 5.4e-84 315.5 275 59.3
QL08p056974 Quercus lobata HOM05D006471 ORTHO05D008157 1.1e-81 307.8 227 67.4
HPP92_017784 Vanilla planifolia HOM05D006471 ORTHO05D008157 2.3e-79 300.1 277 55.6
SEGI_40912 Sequoiadendron giganteum HOM05D006471 ORTHO05D008157 7.8e-75 285.0 285 54.7
Pp3c5_28930 Physcomitrium patens HOM05D006471 ORTHO05D008157 1.1e-68 264.6 283 50.9
Carub.0006s2111 Capsella rubella HOM05D006471 ORTHO05D008157 1.6e-67 260.8 231 58.4
MD13G1003200 Malus domestica HOM05D006471 ORTHO05D008157 1.0e-66 258.1 159 78.0
Mapoly0019s0104 Marchantia polymorpha HOM05D006471 ORTHO05D008157 6.4e-61 238.8 248 50.4
Pp3c14_5150 Physcomitrium patens HOM05D006471 ORTHO05D008157 2.4e-60 236.9 267 47.9
SMO141G0020 Selaginella moellendorffii HOM05D006471 ORTHO05D008157 6.0e-59 232.3 190 57.9
Glyma.20G102800 Glycine max HOM05D006471 ORTHO05D008157 6.6e-50 202.2 264 46.2
FAN12G2193 Fragaria x ananassa HOM05D006471 ORTHO05D008157 4.3e-41 172.9 143 62.2
MCO07G267 Micromonas commoda HOM05D006471 ORTHO05D008157 5.6e-41 172.6 246 41.5
AagrBONN_evm.TU.Sc2ySwM_362.1554 Anthoceros agrestis HOM05D006471 ORTHO05D008157 4.0e-39 166.4 148 55.4
Sc06g0004050 Simmondsia chinensis HOM05D006471 ORTHO05D008157 3.9e-34 149.8 145 57.2
Cre13.g607600 Chlamydomonas reinhardtii HOM05D006471 ORTHO05D008157 2.6e-22 110.5 295 29.8
QL08p056966 Quercus lobata HOM05D006471 ORTHO05D008157 7.4e-17 92.4 52 82.7
Carub.0006s2110 Capsella rubella HOM05D006471 ORTHO05D008157 2.2e-16 90.9 50 84.0
arahy.Tifrunner.gnm1.ann1.SQAN1F Arachis hypogaea HOM05D006471 ORTHO05D008157 9.4e-12 75.5 51 68.6
BolC9t53696H Brassica oleracea HOM05D006471 ORTHO05D008157 2.0e-09 67.8 82 42.7
SEGI_34336 Sequoiadendron giganteum HOM05D006471 ORTHO05D008157 2.6e-06 57.4 33 81.8


User provided reference genes

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