Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16897 Vaccinium macrocarpon HOM05D006424 ORTHO05D007945 6.2e-151 537.3 256 100.0
Rhsim12G0191200 Rhododendron simsii HOM05D006424 ORTHO05D007945 5.5e-115 417.9 254 77.6
CSS0015595 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 1.4e-105 386.7 257 72.8
Actinidia08796 Actinidia chinensis HOM05D006424 ORTHO05D007945 2.0e-104 382.9 252 72.6
Actinidia15982 Actinidia chinensis HOM05D006424 ORTHO05D007945 4.4e-104 381.7 252 72.2
CSS0035863 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 2.8e-103 379.0 264 69.7
Hma1.2p1_0042F.1_g025600 Hydrangea macrophylla HOM05D006424 ORTHO05D007945 4.8e-103 378.3 245 72.7
Manes.04G112700 Manihot esculenta HOM05D006424 ORTHO05D007945 4.1e-102 375.2 251 70.5
QL05p029818 Quercus lobata HOM05D006424 ORTHO05D007945 1.7e-100 369.8 253 69.2
Ca_20445_v3 Cicer arietinum L. HOM05D006424 ORTHO05D007945 2.2e-100 369.4 253 68.8
Oeu039429.1 Olea europaea HOM05D006424 ORTHO05D007945 3.8e-100 368.6 244 71.3
THA.LOC104810510 Tarenaya hassleriana HOM05D006424 ORTHO05D007945 1.1e-99 367.1 245 69.0
Cpa.g.sc10.267 Carica papaya HOM05D006424 ORTHO05D007945 1.5e-99 366.7 244 70.9
Cc04_g04390 Coffea canephora HOM05D006424 ORTHO05D007945 2.5e-99 365.9 252 67.1
Eucgr.F03876 Eucalyptus grandis HOM05D006424 ORTHO05D007945 3.2e-99 365.5 253 68.4
Lj9A500T81 Lonicera japonica HOM05D006424 ORTHO05D007945 5.5e-99 364.8 226 72.6
FAN05G3690 Fragaria x ananassa HOM05D006424 ORTHO05D007945 7.2e-99 364.4 249 69.9
Lalb_Chr04g0262371 Lupinus albus HOM05D006424 ORTHO05D007945 7.2e-99 364.4 211 76.3
RcHm_v2.0_Chr2g0135411 Rosa chinensis HOM05D006424 ORTHO05D007945 1.2e-98 363.6 250 69.6
FAN14G0356 Fragaria x ananassa HOM05D006424 ORTHO05D007945 1.6e-98 363.2 249 69.5
ClCG09G002940 Citrullus lanatus HOM05D006424 ORTHO05D007945 2.1e-98 362.8 249 67.9
MELO3C023426.2 Cucumis melo HOM05D006424 ORTHO05D007945 2.7e-98 362.5 249 67.1
FAN02G1519 Fragaria x ananassa HOM05D006424 ORTHO05D007945 2.7e-98 362.5 249 69.5
Nn8g39504 Nelumbo nucifera HOM05D006424 ORTHO05D007945 2.7e-98 362.5 252 66.3
Potri.001G204300 Populus trichocarpa HOM05D006424 ORTHO05D007945 2.7e-98 362.5 252 68.3
TAR383G1051 Trochodendron aralioides HOM05D006424 ORTHO05D007945 2.7e-98 362.5 246 68.3
Prupe.3G087300 Prunus persica HOM05D006424 ORTHO05D007945 4.7e-98 361.7 251 68.9
Medtr4g010140 Medicago truncatula HOM05D006424 ORTHO05D007945 6.1e-98 361.3 246 69.5
Nn2g12084 Nelumbo nucifera HOM05D006424 ORTHO05D007945 6.1e-98 361.3 245 67.8
CANSAT56G3050 Cannabis sativa HOM05D006424 ORTHO05D007945 8.0e-98 360.9 248 69.4
AUR62016338 Chenopodium quinoa HOM05D006424 ORTHO05D007945 8.0e-98 360.9 243 69.5
VMungo0331G1912 Vigna mungo HOM05D006424 ORTHO05D007945 8.0e-98 360.9 253 66.4
AUR62011520 Chenopodium quinoa HOM05D006424 ORTHO05D007945 1.4e-97 360.1 243 69.5
CsaV3_7G032330 Cucumis sativus L. HOM05D006424 ORTHO05D007945 1.4e-97 360.1 249 66.3
Duzib192G0907 Durio zibethinus HOM05D006424 ORTHO05D007945 1.4e-97 360.1 204 78.4
Manes.11G056800 Manihot esculenta HOM05D006424 ORTHO05D007945 1.4e-97 360.1 251 66.9
GSVIVG01017340001 Vitis vinifera HOM05D006424 ORTHO05D007945 1.4e-97 360.1 247 68.4
Gohir.A06G185600 Gossypium hirsutum HOM05D006424 ORTHO05D007945 2.3e-97 359.4 252 67.1
HanXRQChr04g0097881 Helianthus annuus HOM05D006424 ORTHO05D007945 2.3e-97 359.4 249 67.1
MD17G1212100 Malus domestica HOM05D006424 ORTHO05D007945 2.3e-97 359.4 204 78.9
PGSC0003DMG402028626 Solanum tuberosum HOM05D006424 ORTHO05D007945 2.3e-97 359.4 245 67.3
Peaxi162Scf00034g01413 Petunia axillaris HOM05D006424 ORTHO05D007945 3.0e-97 359.0 253 65.6
Lsat_1_v5_gn_1_34401 Lactuca sativa HOM05D006424 ORTHO05D007945 4.0e-97 358.6 259 64.9
Gohir.D06G192200 Gossypium hirsutum HOM05D006424 ORTHO05D007945 5.2e-97 358.2 252 66.7
Ah.01g020600 Amaranthus hybridus HOM05D006424 ORTHO05D007945 6.8e-97 357.8 207 75.8
Lj3g0018478 Lotus japonicus HOM05D006424 ORTHO05D007945 6.8e-97 357.8 252 67.5
Sed0012965 Sechium edule HOM05D006424 ORTHO05D007945 6.8e-97 357.8 249 67.5
Aqoxy7G03662 Aquilegia oxysepala HOM05D006424 ORTHO05D007945 1.2e-96 357.1 245 67.3
COL.COLO4_11949 Corchorus olitorius HOM05D006424 ORTHO05D007945 1.2e-96 357.1 245 68.2
CiPaw.02G157300 Carya illinoinensis HOM05D006424 ORTHO05D007945 1.5e-96 356.7 210 77.1
Migut.I00764 Erythranthe guttata HOM05D006424 ORTHO05D007945 1.5e-96 356.7 244 68.4
Gorai.010G225400 Gossypium raimondii HOM05D006424 ORTHO05D007945 1.5e-96 356.7 252 66.3
MBI04_g29330_MAGBIO Magnolia biondii HOM05D006424 ORTHO05D007945 2.0e-96 356.3 245 67.8
Nitab4.5_0009497g0010 Nicotiana tabacum HOM05D006424 ORTHO05D007945 2.0e-96 356.3 244 67.6
Cfa001961 Carpinus fangiana HOM05D006424 ORTHO05D007945 2.6e-96 355.9 210 74.8
MSTRG.22746 Avicennia marina HOM05D006424 ORTHO05D007945 4.4e-96 355.1 245 67.3
PGR102G1391 Punica granatum HOM05D006424 ORTHO05D007945 5.7e-96 354.8 249 66.7
Thecc.06G024200 Theobroma cacao HOM05D006424 ORTHO05D007945 1.7e-95 353.2 248 66.9
Sopen12g021950 Solanum pennellii HOM05D006424 ORTHO05D007945 2.2e-95 352.8 248 65.3
TPR.G38617 Trifolium pratense HOM05D001630 ORTHO05D007945 2.2e-95 352.8 243 69.1
DCAR_021344 Daucus carota HOM05D006424 ORTHO05D007945 2.8e-95 352.4 207 74.4
Phvul.010G156300 Phaseolus vulgaris HOM05D006424 ORTHO05D007945 2.8e-95 352.4 253 64.4
Solyc12g042770.3 Solanum lycopersicum HOM05D006424 ORTHO05D007945 3.7e-95 352.1 244 66.0
Atru.chr1.2950 Acer truncatum HOM05D006424 ORTHO05D007945 6.3e-95 351.3 248 65.7
A03p39490 Brassica napus HOM05D006424 ORTHO05D007945 6.3e-95 351.3 236 65.7
BcaB06g25691 Brassica carinata HOM05D006424 ORTHO05D007945 8.3e-95 350.9 209 72.2
TWI12G0141 Tripterygium wilfordii HOM05D006424 ORTHO05D007945 8.3e-95 350.9 255 63.1
Aa31LG8G3030 Aethionema arabicum HOM05D006424 ORTHO05D007945 1.4e-94 350.1 209 73.2
ATR0322G065 Amborella trichopoda HOM05D006424 ORTHO05D007945 1.4e-94 350.1 248 66.1
Glyma.08G213000 Glycine max HOM05D006424 ORTHO05D007945 1.4e-94 350.1 245 66.9
BcaC05g28929 Brassica carinata HOM05D006424 ORTHO05D007945 3.1e-94 349.0 209 72.2
A05p33570 Brassica napus HOM05D006424 ORTHO05D007945 3.1e-94 349.0 209 72.2
C05p50560 Brassica napus HOM05D006424 ORTHO05D007945 3.1e-94 349.0 209 72.2
BolC5t33801H Brassica oleracea HOM05D006424 ORTHO05D007945 3.1e-94 349.0 209 72.2
CARHR090930 Cardamine hirsuta HOM05D006424 ORTHO05D007945 3.1e-94 349.0 209 71.8
Haze_16559 Corylus avellana HOM05D006424 ORTHO05D007945 3.1e-94 349.0 273 62.6
AT3G15840 Arabidopsis thaliana HOM05D006424 ORTHO05D007945 9.1e-94 347.4 209 72.2
BcaC01g03854 Brassica carinata HOM05D006424 ORTHO05D007945 9.1e-94 347.4 201 74.6
FvH4_6g29710 Fragaria vesca HOM05D006424 ORTHO05D007945 1.2e-93 347.1 197 78.7
CAN.G47.13 Capsicum annuum HOM05D006424 ORTHO05D007945 1.6e-93 346.7 208 72.6
PSO210G3245 Papaver somniferum HOM05D006424 ORTHO05D007945 1.6e-93 346.7 244 65.6
Glyma.07G029900 Glycine max HOM05D006424 ORTHO05D007945 2.0e-93 346.3 209 73.7
C03p47890 Brassica napus HOM05D006424 ORTHO05D007945 2.7e-93 345.9 208 72.1
Carub.0003s1558 Capsella rubella HOM05D006424 ORTHO05D007945 2.7e-93 345.9 212 70.3
Sabra01G0157400 Salix brachista HOM05D006424 ORTHO05D007945 4.5e-93 345.1 249 66.3
AL3G28500 Arabidopsis lyrata HOM05D006424 ORTHO05D007945 5.9e-93 344.7 209 71.3
ECA247G2617 Erigeron canadensis HOM05D006424 ORTHO05D007945 5.9e-93 344.7 244 66.0
Thhalv10022443m.g Eutrema salsugineum HOM05D006424 ORTHO05D007945 5.9e-93 344.7 209 71.8
BraA03t13099Z Brassica rapa HOM05D006424 ORTHO05D007945 7.7e-93 344.4 236 64.8
Sp3g14150 Schrenkiella parvula HOM05D006424 ORTHO05D007945 7.7e-93 344.4 209 71.8
CiPaw.01G248200 Carya illinoinensis HOM05D006424 ORTHO05D007945 1.0e-92 344.0 249 65.5
PSO210G5365 Papaver somniferum HOM05D006424 ORTHO05D007945 2.3e-92 342.8 244 64.8
BraA05t22180Z Brassica rapa HOM05D006424 ORTHO05D007945 8.6e-92 340.9 241 65.6
unitig_27.g24949 Utricularia gibba HOM05D006424 ORTHO05D007945 9.5e-91 337.4 208 71.2
Ciclev10026222m.g Citrus clementina HOM05D006424 ORTHO05D007945 1.2e-90 337.0 246 62.2
BolC3t17067H Brassica oleracea HOM05D006424 ORTHO05D007945 4.0e-89 332.0 260 58.8
arahy.Tifrunner.gnm1.ann1.92ZGJC Arachis hypogaea HOM05D006424 ORTHO05D007945 2.6e-88 329.3 252 62.3
CDE07G1654 Ceratophyllum demersum HOM05D006424 ORTHO05D007945 5.7e-88 328.2 218 68.3
Zm00001eb049190 Zea mays HOM05D006424 ORTHO05D007945 1.3e-87 327.0 206 69.9
FAN09G3401 Fragaria x ananassa HOM05D006424 ORTHO05D007945 4.9e-87 325.1 267 61.4
Nitab4.5_0003157g0020 Nicotiana tabacum HOM05D006424 ORTHO05D007945 4.9e-87 325.1 244 64.3
Os03g0586500 Oryza sativa ssp. japonica HOM05D006424 ORTHO05D007945 4.1e-86 322.0 206 68.4
Zm00001eb219530 Zea mays HOM05D006424 ORTHO05D007945 7.0e-86 321.2 247 61.1
Mapoly0024s0088 Marchantia polymorpha HOM05D006424 ORTHO05D007945 1.4e-73 280.4 223 56.1
SalBow2G1302 Salvia bowleyana HOM05D006424 ORTHO05D007945 1.2e-72 277.3 251 55.0
Pp3c9_11540 Physcomitrium patens HOM05D006424 ORTHO05D007945 8.3e-71 271.2 206 58.7
CBR_g38381 Chara braunii HOM05D006424 ORTHO05D007945 7.0e-70 268.1 204 59.3
Pp3c22_2660 Physcomitrium patens HOM05D006424 ORTHO05D007945 3.9e-68 262.3 203 58.1
AagrBONN_evm.TU.Sc2ySwM_344.5484 Anthoceros agrestis HOM05D006424 ORTHO05D007945 4.0e-65 252.3 207 55.6
SMO331G0083 Selaginella moellendorffii HOM05D006424 ORTHO05D007945 1.2e-64 250.8 215 53.5
Dinv38123 Davidia involucrata HOM05D006424 ORTHO05D007945 1.5e-64 250.4 173 67.1
Thecc.K0004600 Theobroma cacao HOM05D006424 ORTHO05D007945 1.3e-63 247.3 144 75.7
Thecc.06G024600 Theobroma cacao HOM05D006424 ORTHO05D007945 8.6e-60 234.6 173 63.6
Hund06560 Selenicereus undatus HOM05D006424 ORTHO05D007945 1.5e-59 233.8 212 55.2
Sed0007474 Sechium edule HOM05D006424 ORTHO05D007945 5.6e-59 231.9 169 63.9
Pp3c15_11500 Physcomitrium patens HOM05D006424 ORTHO05D007945 2.4e-54 216.5 187 54.0
SEGI_16074 Sequoiadendron giganteum HOM05D006424 ORTHO05D007945 2.1e-50 203.4 171 54.4
arahy.Tifrunner.gnm1.ann1.7R86JN Arachis hypogaea HOM05D006424 ORTHO05D007945 1.4e-46 190.7 252 42.9
EL10Ac9g21901 Beta vulgaris HOM05D006424 ORTHO05D007945 6.9e-41 171.8 136 62.5
Psat7g257120 Pisum sativum HOM05D006424 ORTHO05D007945 3.8e-39 166.0 140 61.4
QL05p029868 Quercus lobata HOM05D006424 ORTHO05D007945 2.8e-26 123.2 122 54.9
Oeu000425.1 Olea europaea HOM05D006424 ORTHO05D007945 7.4e-19 98.6 165 40.0
QL05p029832 Quercus lobata HOM05D006424 ORTHO05D007945 6.3e-18 95.5 103 51.5
arahy.Tifrunner.gnm1.ann1.ZYH6JG Arachis hypogaea HOM05D006424 ORTHO05D007945 3.8e-15 86.3 55 67.3
arahy.Tifrunner.gnm1.ann1.YP381G Arachis hypogaea HOM05D006424 ORTHO05D007945 2.8e-10 70.1 37 78.4


User provided reference genes

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