Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16858 Vaccinium macrocarpon HOM05D003659 ORTHO05D004298 1.6e-123 446.0 216 100.0
Rhsim12G0187700 Rhododendron simsii HOM05D003659 ORTHO05D004298 7.9e-115 417.2 216 92.6
Actinidia08946 Actinidia chinensis HOM05D003659 ORTHO05D004298 1.4e-106 389.8 216 87.0
Dinv23291 Davidia involucrata HOM05D003659 ORTHO05D004298 9.7e-105 383.6 218 85.3
Lsat_1_v5_gn_1_32141 Lactuca sativa HOM05D003659 ORTHO05D004298 1.3e-104 383.3 216 84.3
HanXRQChr04g0098481 Helianthus annuus HOM05D003659 ORTHO05D004298 1.7e-104 382.9 216 84.3
Actinidia25461 Actinidia chinensis HOM05D003659 ORTHO05D004298 2.8e-104 382.1 216 84.7
Oeu027829.1 Olea europaea HOM05D003659 ORTHO05D004298 2.8e-104 382.1 216 84.7
Cc04_g05030 Coffea canephora HOM05D003659 ORTHO05D004298 8.2e-104 380.6 215 84.2
Oeu060128.1 Olea europaea HOM05D003659 ORTHO05D004298 1.4e-103 379.8 216 84.3
Migut.D01114 Erythranthe guttata HOM05D003659 ORTHO05D004298 4.1e-103 378.3 216 83.3
Migut.I00701 Erythranthe guttata HOM05D003659 ORTHO05D004298 9.1e-103 377.1 215 83.3
Actinidia18243 Actinidia chinensis HOM05D003659 ORTHO05D004298 1.6e-102 376.3 216 83.8
CSS0027457 Camellia sinensis var. sinensis HOM05D003659 ORTHO05D004298 1.6e-102 376.3 216 84.3
CSS0033149 Camellia sinensis var. sinensis HOM05D003659 ORTHO05D004298 1.6e-102 376.3 216 84.3
MSTRG.9405 Avicennia marina HOM05D003659 ORTHO05D004298 4.5e-102 374.8 215 83.3
vmacro19047 Vaccinium macrocarpon HOM05D003659 ORTHO05D004298 5.9e-102 374.4 216 85.2
ECA246G1998 Erigeron canadensis HOM05D003659 ORTHO05D004298 7.7e-102 374.0 222 79.7
Lsat_1_v5_gn_5_8201 Lactuca sativa HOM05D003659 ORTHO05D004298 1.0e-101 373.6 215 81.9
MSTRG.22794 Avicennia marina HOM05D003659 ORTHO05D004298 1.3e-101 373.2 216 82.9
Lj5A80T55 Lonicera japonica HOM05D003659 ORTHO05D004298 1.7e-101 372.9 216 81.5
MSTRG.11175 Avicennia marina HOM05D003659 ORTHO05D004298 1.5e-100 369.8 216 83.3
ECA247G2368 Erigeron canadensis HOM05D003659 ORTHO05D004298 5.5e-100 367.9 219 81.3
Rhsim08G0207200 Rhododendron simsii HOM05D003659 ORTHO05D004298 5.5e-100 367.9 216 83.3
CAN.G407.57 Capsicum annuum HOM05D003659 ORTHO05D004298 2.7e-99 365.5 216 81.9
Peaxi162Scf00332g00435 Petunia axillaris HOM05D003659 ORTHO05D004298 2.7e-99 365.5 216 81.9
CiPaw.08G006800 Carya illinoinensis HOM05D003659 ORTHO05D004298 3.6e-99 365.2 217 81.1
Glyma.06G062900 Glycine max HOM05D003659 ORTHO05D004298 3.6e-99 365.2 219 81.3
Lalb_Chr23g0268261 Lupinus albus HOM05D003659 ORTHO05D004298 3.6e-99 365.2 221 79.6
QL02p019557 Quercus lobata HOM05D003659 ORTHO05D004298 6.1e-99 364.4 217 80.6
DCAR_021366 Daucus carota HOM05D003659 ORTHO05D004298 8.0e-99 364.0 220 79.5
HanXRQChr08g0235851 Helianthus annuus HOM05D003659 ORTHO05D004298 1.0e-98 363.6 206 82.5
PGR044G1948 Punica granatum HOM05D003659 ORTHO05D004298 1.8e-98 362.8 217 81.1
Cfa013072 Carpinus fangiana HOM05D003659 ORTHO05D004298 2.3e-98 362.5 218 81.2
Potri.006G263200 Populus trichocarpa HOM05D003659 ORTHO05D004298 5.2e-98 361.3 217 79.3
PGSC0003DMG400014120 Solanum tuberosum HOM05D003659 ORTHO05D004298 5.2e-98 361.3 216 81.0
Sabra06G0205400 Salix brachista HOM05D003659 ORTHO05D004298 6.7e-98 360.9 217 79.7
TWI32G0040 Tripterygium wilfordii HOM05D003659 ORTHO05D004298 8.8e-98 360.5 218 80.3
Nitab4.5_0001454g0190 Nicotiana tabacum HOM05D003659 ORTHO05D004298 1.5e-97 359.8 225 79.1
Aqoxy7G01595 Aquilegia oxysepala HOM05D003659 ORTHO05D004298 2.6e-97 359.0 219 79.9
TWI34G1103 Tripterygium wilfordii HOM05D003659 ORTHO05D004298 4.4e-97 358.2 218 79.4
SGA_v2.0_scaffold5G02776 Striga asiatica HOM05D003659 ORTHO05D004298 9.7e-97 357.1 216 81.0
Nn8g39829 Nelumbo nucifera HOM05D003659 ORTHO05D004298 1.7e-96 356.3 217 79.3
CsaV3_4G036690 Cucumis sativus L. HOM05D003659 ORTHO05D004298 2.2e-96 355.9 217 79.3
GSVIVG01034217001 Vitis vinifera HOM05D003659 ORTHO05D004298 2.8e-96 355.5 215 80.9
CSS0004565 Camellia sinensis var. sinensis HOM05D003659 ORTHO05D004298 6.3e-96 354.4 217 80.2
CSS0014874 Camellia sinensis var. sinensis HOM05D003659 ORTHO05D004298 6.3e-96 354.4 217 80.2
PSO170G6877 Papaver somniferum HOM05D003659 ORTHO05D004298 6.3e-96 354.4 218 77.5
Solyc03g117020.4 Solanum lycopersicum HOM05D003659 ORTHO05D004298 6.3e-96 354.4 213 79.8
Sopen03g035920 Solanum pennellii HOM05D003659 ORTHO05D004298 6.3e-96 354.4 213 79.8
AUR62030831 Chenopodium quinoa HOM05D003659 ORTHO05D004298 8.2e-96 354.0 216 75.9
HanXRQChr05g0153781 Helianthus annuus HOM05D003659 ORTHO05D004298 1.1e-95 353.6 212 80.7
Nn2g12325 Nelumbo nucifera HOM05D003659 ORTHO05D004298 1.1e-95 353.6 216 79.2
PSO017G1057 Papaver somniferum HOM05D003659 ORTHO05D004298 1.1e-95 353.6 218 77.1
AUR62026991 Chenopodium quinoa HOM05D003659 ORTHO05D004298 1.4e-95 353.2 215 76.7
Ciclev10009450m.g Citrus clementina HOM05D003659 ORTHO05D004298 1.4e-95 353.2 217 79.7
GSVIVG01035892001 Vitis vinifera HOM05D003659 ORTHO05D004298 1.4e-95 353.2 217 78.3
ClCG05G016430 Citrullus lanatus HOM05D003659 ORTHO05D004298 1.8e-95 352.8 217 78.8
Atru.chr7.2534 Acer truncatum HOM05D003659 ORTHO05D004298 4.1e-95 351.7 217 77.9
Hund06525 Selenicereus undatus HOM05D003659 ORTHO05D004298 7.0e-95 350.9 215 77.7
Lj9A494G39 Lonicera japonica HOM05D003659 ORTHO05D004298 9.1e-95 350.5 192 85.4
Hund00440 Selenicereus undatus HOM05D003659 ORTHO05D004298 1.2e-94 350.1 217 76.5
MELO3C016972.2 Cucumis melo HOM05D003659 ORTHO05D004298 1.6e-94 349.7 189 86.2
Manes.16G128300 Manihot esculenta HOM05D003659 ORTHO05D004298 1.6e-94 349.7 217 75.6
THA.LOC104803632 Tarenaya hassleriana HOM05D003659 ORTHO05D004298 1.6e-94 349.7 216 77.8
Eucgr.C02663 Eucalyptus grandis HOM05D003659 ORTHO05D004298 2.7e-94 349.0 217 76.0
TAR625G1310 Trochodendron aralioides HOM05D003659 ORTHO05D004298 2.7e-94 349.0 216 77.8
Carub.0004s0471 Capsella rubella HOM05D003659 ORTHO05D004298 3.5e-94 348.6 216 75.5
A04p19520 Brassica napus HOM05D003659 ORTHO05D004298 7.7e-94 347.4 216 76.4
BraA04t17546Z Brassica rapa HOM05D003659 ORTHO05D004298 7.7e-94 347.4 216 76.4
Manes.03G010100 Manihot esculenta HOM05D003659 ORTHO05D004298 7.7e-94 347.4 219 76.7
Sp4g04120 Schrenkiella parvula HOM05D003659 ORTHO05D004298 7.7e-94 347.4 216 75.5
Sed0006058 Sechium edule HOM05D003659 ORTHO05D004298 7.7e-94 347.4 189 85.2
ATR0739G101 Amborella trichopoda HOM05D003659 ORTHO05D004298 1.3e-93 346.7 212 76.9
MD15G1038400 Malus domestica HOM05D003659 ORTHO05D004298 1.7e-93 346.3 216 76.4
C04p55110 Brassica napus HOM05D003659 ORTHO05D004298 2.2e-93 345.9 216 76.9
BolC4t27050H Brassica oleracea HOM05D003659 ORTHO05D004298 2.2e-93 345.9 216 76.9
AT2G25110 Arabidopsis thaliana HOM05D003659 ORTHO05D004298 3.8e-93 345.1 216 75.0
CARHR116580 Cardamine hirsuta HOM05D003659 ORTHO05D004298 3.8e-93 345.1 216 74.5
EL10Ac9g22216 Beta vulgaris HOM05D003659 ORTHO05D004298 5.0e-93 344.7 216 75.5
BcaC02g08370 Brassica carinata HOM05D003659 ORTHO05D004298 5.0e-93 344.7 216 76.4
RcHm_v2.0_Chr6g0299581 Rosa chinensis HOM05D003659 ORTHO05D004298 6.5e-93 344.4 216 75.5
AL4G16270 Arabidopsis lyrata HOM05D003659 ORTHO05D004298 1.1e-92 343.6 216 74.5
arahy.Tifrunner.gnm1.ann1.48QDBJ Arachis hypogaea HOM05D003659 ORTHO05D004298 1.1e-92 343.6 189 86.8
TAR625G1087 Trochodendron aralioides HOM05D003659 ORTHO05D004298 1.1e-92 343.6 216 76.9
FAN20G3050 Fragaria x ananassa HOM05D003659 ORTHO05D004298 1.5e-92 343.2 216 75.5
HPP92_004679 Vanilla planifolia HOM05D003659 ORTHO05D004298 1.5e-92 343.2 217 76.5
BcaB06g28036 Brassica carinata HOM05D003659 ORTHO05D004298 1.9e-92 342.8 217 75.6
Prupe.1G392400 Prunus persica HOM05D003659 ORTHO05D004298 1.9e-92 342.8 216 75.0
arahy.Tifrunner.gnm1.ann1.85LDPV Arachis hypogaea HOM05D003659 ORTHO05D004298 2.5e-92 342.4 189 86.2
Thhalv10000317m.g Eutrema salsugineum HOM05D003659 ORTHO05D004298 2.5e-92 342.4 217 76.0
Psat5g032160 Pisum sativum HOM05D003659 ORTHO05D004298 2.5e-92 342.4 220 76.4
BolC8t51458H Brassica oleracea HOM05D003659 ORTHO05D004298 4.2e-92 341.7 217 75.6
Aa31LG7G12130 Aethionema arabicum HOM05D003659 ORTHO05D004298 7.2e-92 340.9 215 74.9
Gorai.001G037100 Gossypium raimondii HOM05D003659 ORTHO05D004298 1.2e-91 340.1 186 84.4
Lalb_Chr08g0244391 Lupinus albus HOM05D003659 ORTHO05D004298 1.2e-91 340.1 189 85.2
FvH4_2g40990 Fragaria vesca HOM05D003659 ORTHO05D004298 2.1e-91 339.3 216 75.0
FAN27G2887 Fragaria x ananassa HOM05D003659 ORTHO05D004298 2.7e-91 339.0 216 74.5
Oeu004335.5 Olea europaea HOM05D003659 ORTHO05D004298 2.7e-91 339.0 235 71.5
Ah.01g006880 Amaranthus hybridus HOM05D003659 ORTHO05D004298 4.7e-91 338.2 252 66.7
Glyma.04G061900 Glycine max HOM05D003659 ORTHO05D004298 6.1e-91 337.8 184 84.8
Gohir.D07G035300 Gossypium hirsutum HOM05D003659 ORTHO05D004298 6.1e-91 337.8 186 83.9
Gohir.A07G031500 Gossypium hirsutum HOM05D003659 ORTHO05D004298 8.0e-91 337.4 186 83.9
Thecc.09G017100 Theobroma cacao HOM05D003659 ORTHO05D004298 8.0e-91 337.4 218 74.8
DCAR_025575 Daucus carota HOM05D003659 ORTHO05D004298 1.8e-90 336.3 217 75.1
Duzib168G1659 Durio zibethinus HOM05D003659 ORTHO05D004298 3.0e-90 335.5 186 82.8
Cpa.g.sc127.19 Carica papaya HOM05D003659 ORTHO05D004298 4.0e-90 335.1 183 85.8
Potri.018G020700 Populus trichocarpa HOM05D003659 ORTHO05D004298 4.0e-90 335.1 184 84.8
Phvul.009G088100 Phaseolus vulgaris HOM05D003659 ORTHO05D004298 6.8e-90 334.3 182 83.5
Os08g0278900 Oryza sativa ssp. japonica HOM05D003659 ORTHO05D004298 8.8e-90 334.0 218 73.4
Lj1g0004529 Lotus japonicus HOM05D003659 ORTHO05D004298 1.2e-89 333.6 188 83.0
Gohir.A05G058400 Gossypium hirsutum HOM05D003659 ORTHO05D004298 1.5e-89 333.2 186 81.7
Gorai.009G061600 Gossypium raimondii HOM05D003659 ORTHO05D004298 1.5e-89 333.2 186 81.7
Os08g0440500 Oryza sativa ssp. japonica HOM05D003659 ORTHO05D004298 2.0e-89 332.8 218 72.9
Sed0005308 Sechium edule HOM05D003659 ORTHO05D004298 2.6e-89 332.4 185 82.7
Duzib150G0849 Durio zibethinus HOM05D003659 ORTHO05D004298 3.4e-89 332.0 184 83.7
Gohir.D05G060500 Gossypium hirsutum HOM05D003659 ORTHO05D004298 3.4e-89 332.0 184 82.6
SHI18485 Sapria himalayana HOM05D003659 ORTHO05D004298 4.4e-89 331.6 218 72.0
Medtr3g106130 Medicago truncatula HOM05D003659 ORTHO05D004298 7.5e-89 330.9 240 70.8
A09p55870 Brassica napus HOM05D003659 ORTHO05D004298 8.3e-88 327.4 188 80.3
BraA09t40990Z Brassica rapa HOM05D003659 ORTHO05D004298 8.3e-88 327.4 188 80.3
BcaC07g40890 Brassica carinata HOM05D003659 ORTHO05D004298 2.4e-87 325.9 188 79.8
C08p38860 Brassica napus HOM05D003659 ORTHO05D004298 2.4e-87 325.9 188 79.8
unitig_0.g1106 Utricularia gibba HOM05D003659 ORTHO05D004298 7.0e-87 324.3 250 65.6
unitig_61.g26227 Utricularia gibba HOM05D003659 ORTHO05D004298 7.0e-87 324.3 216 70.4
SEGI_01700 Sequoiadendron giganteum HOM05D003659 ORTHO05D004298 1.2e-86 323.6 207 73.4
MD08G1057800 Malus domestica HOM05D003659 ORTHO05D004298 2.0e-86 322.8 183 79.2
Haze_21430 Corylus avellana HOM05D003659 ORTHO05D004298 3.5e-86 322.0 268 63.4
Zm00001eb041170 Zea mays HOM05D003659 ORTHO05D004298 4.5e-86 321.6 186 78.5
Zm00001eb179820 Zea mays HOM05D003659 ORTHO05D004298 1.7e-85 319.7 186 78.5
CDE05G0949 Ceratophyllum demersum HOM05D003659 ORTHO05D004298 3.8e-85 318.5 187 81.3
COL.COLO4_03628 Corchorus olitorius HOM05D003659 ORTHO05D004298 5.5e-84 314.7 174 83.9
SalBow7G4756 Salvia bowleyana HOM05D003659 ORTHO05D004298 1.2e-83 313.5 173 81.5
Lsat_1_v5_gn_4_87041 Lactuca sativa HOM05D003659 ORTHO05D004298 1.7e-80 303.1 211 68.2
arahy.Tifrunner.gnm1.ann1.7GH63I Arachis hypogaea HOM05D003659 ORTHO05D004298 2.2e-80 302.8 212 68.9
CDE02G2060 Ceratophyllum demersum HOM05D003659 ORTHO05D004298 2.2e-80 302.8 171 81.9
arahy.Tifrunner.gnm1.ann1.Q7FMUW Arachis hypogaea HOM05D003659 ORTHO05D004298 8.3e-80 300.8 212 68.4
Sc12g0008380 Simmondsia chinensis HOM05D003659 ORTHO05D004298 2.4e-79 299.3 190 75.3
Pp3c12_21450 Physcomitrium patens HOM05D003659 ORTHO05D004298 1.1e-76 290.4 210 67.1
Pp3c4_7140 Physcomitrium patens HOM05D003659 ORTHO05D004298 9.5e-76 287.3 208 65.9
Mapoly0146s0027 Marchantia polymorpha HOM05D003659 ORTHO05D004298 5.7e-73 278.1 211 60.7
Ah.16g104980 Amaranthus hybridus HOM05D003659 ORTHO05D004298 2.9e-72 275.8 195 65.1
SMO340G0294 Selaginella moellendorffii HOM05D003659 ORTHO05D004298 7.0e-71 271.2 181 70.7
SMO304G0007 Selaginella moellendorffii HOM05D003659 ORTHO05D004298 3.5e-70 268.9 203 63.5
CBR_g38858 Chara braunii HOM05D003659 ORTHO05D004298 1.8e-66 256.5 191 61.8
Pp3c9_3320 Physcomitrium patens HOM05D003659 ORTHO05D004298 2.0e-65 253.1 209 59.8
TPR.G3109 Trifolium pratense HOM05D003659 ORTHO05D004298 7.5e-65 251.1 220 62.3
HPP92_010392 Vanilla planifolia HOM05D003659 ORTHO05D004298 5.0e-61 238.4 177 63.8
TAR636G3496 Trochodendron aralioides HOM05D003659 ORTHO05D004298 1.5e-60 236.9 238 57.1
Dinv21405 Davidia involucrata HOM05D003659 ORTHO05D004298 8.1e-59 231.1 124 85.5
AUR62012468 Chenopodium quinoa HOM05D003659 ORTHO05D004298 6.4e-56 221.5 227 52.9
Nitab4.5_0026787g0010 Nicotiana tabacum HOM05D003659 ORTHO05D004298 1.8e-50 203.4 129 78.3
Cre13.g571750 Chlamydomonas reinhardtii HOM05D003659 ORTHO05D004298 8.9e-50 201.1 188 50.0
MCO11G512 Micromonas commoda HOM05D003659 ORTHO05D004298 2.6e-49 199.5 184 52.7
AUR62031594 Chenopodium quinoa HOM05D003659 ORTHO05D004298 1.4e-47 193.7 181 53.0
Cc07_g20440 Coffea canephora HOM05D003659 ORTHO05D004298 1.6e-46 190.3 118 78.0
Cc00_g05940 Coffea canephora HOM05D003659 ORTHO05D004298 1.0e-45 187.6 118 75.4
Cc10_g09910 Coffea canephora HOM05D003659 ORTHO05D004298 5.1e-45 185.3 118 76.3
Cc08_g06110 Coffea canephora HOM05D003659 ORTHO05D004298 6.6e-45 184.9 118 77.1
THA.LOC104804845 Tarenaya hassleriana HOM05D003659 ORTHO05D004298 6.6e-45 184.9 105 77.1
Cc05_g03490 Coffea canephora HOM05D003659 ORTHO05D004298 9.6e-44 181.0 113 77.0
Cc10_g10650 Coffea canephora HOM05D003659 ORTHO05D004298 3.6e-43 179.1 123 74.0
Actinidia36884 Actinidia chinensis HOM05D003659 ORTHO05D004298 4.0e-42 175.6 107 81.3
Cc05_g01640 Coffea canephora HOM05D003659 ORTHO05D004298 1.2e-41 174.1 119 73.1
TPR.G40670 Trifolium pratense HOM05D003659 ORTHO05D004298 2.9e-40 169.5 87 86.2
Dinv40986 Davidia involucrata HOM05D003659 ORTHO05D004298 1.5e-36 157.1 126 67.5
arahy.Tifrunner.gnm1.ann1.K0Y0BK Arachis hypogaea HOM05D003659 ORTHO05D004298 4.3e-36 155.6 108 68.5
PRCOL_00006403 Prasinoderma coloniale HOM05D003659 ORTHO05D004298 1.3e-35 154.1 184 39.7
Cc00_g06440 Coffea canephora HOM05D003659 ORTHO05D004298 1.4e-34 150.6 118 63.6
Cc08_g07620 Coffea canephora HOM05D003659 ORTHO05D004298 1.2e-30 137.5 75 84.0
Ca_15770_v3 Cicer arietinum L. HOM05D003659 ORTHO05D004298 3.0e-29 132.9 67 88.1
EL10Ac2g04128 Beta vulgaris HOM05D003659 ORTHO05D004298 3.6e-27 125.9 148 45.3
Cc00_g21920 Coffea canephora HOM05D003659 ORTHO05D004298 2.4e-26 123.2 75 78.7
HPP92_010427 Vanilla planifolia HOM05D003659 ORTHO05D004298 1.3e-24 117.5 120 53.3
BraA10t44716Z Brassica rapa HOM05D001880 ORTHO05D004730 6.4e-24 115.2 61 80.3
FvH4_3g15950 Fragaria vesca HOM05D003659 ORTHO05D004298 3.0e-21 106.3 81 66.7
Haze_27667 Corylus avellana HOM05D003659 ORTHO05D004298 5.6e-20 102.1 120 42.5
AagrBONN_evm.TU.Sc2ySwM_117.1898 Anthoceros agrestis HOM05D003659 ORTHO05D004298 2.6e-17 93.2 85 52.9
Hma1.2p1_0302F.1_g118750 Hydrangea macrophylla HOM05D003659 ORTHO05D004298 3.4e-17 92.8 61 75.4
FAN11G3099 Fragaria x ananassa HOM05D003659 ORTHO05D004298 3.8e-16 89.4 73 64.4
Cfa026278 Carpinus fangiana HOM05D003659 ORTHO05D121859 1.4e-10 70.9 174 32.2
Cfa024316 Carpinus fangiana HOM05D003659 ORTHO05D124421 2.6e-09 66.6 195 30.3
SHI37098 Sapria himalayana HOM05D003659 ORTHO05D004298 2.6e-09 66.6 43 69.8
BcaB08g35155 Brassica carinata HOM05D003659 ORTHO05D004298 1.4e-07 60.8 123 33.3
SHI48633 Sapria himalayana HOM05D003659 ORTHO05D004298 5.5e-07 58.9 48 60.4
A10p26590 Brassica napus HOM05D001880 ORTHO05D004730 1.2e-06 57.8 28 82.1
SHI20750 Sapria himalayana HOM05D003659 ORTHO05D004298 1.2e-06 57.8 48 58.3


User provided reference genes

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