Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16838 Vaccinium macrocarpon HOM05D006171 ORTHO05D007294 9.1e-165 583.6 309 100.0
Rhsim12G0183500 Rhododendron simsii HOM05D006171 ORTHO05D007294 1.7e-150 536.2 309 91.9
CSS0034221 Camellia sinensis var. sinensis HOM05D006171 ORTHO05D007294 6.2e-137 491.1 308 82.1
Nitab4.5_0002700g0080 Nicotiana tabacum HOM05D006171 ORTHO05D007294 1.6e-132 476.5 309 75.7
CAN.G1008.12 Capsicum annuum HOM05D006171 ORTHO05D007294 3.5e-132 475.3 308 75.6
SGA_v2.0_scaffold74G24604 Striga asiatica HOM05D006171 ORTHO05D007294 3.9e-131 471.9 310 82.6
SalBow1G2136 Salvia bowleyana HOM05D006171 ORTHO05D007294 1.9e-130 469.5 310 74.8
Solyc03g117740.3 Solanum lycopersicum HOM05D006171 ORTHO05D007294 1.9e-130 469.5 309 75.7
Potri.003G185754 Populus trichocarpa HOM05D006171 ORTHO05D007294 2.5e-130 469.2 251 88.8
Actinidia36860 Actinidia chinensis HOM05D006171 ORTHO05D007294 4.3e-130 468.4 252 88.5
Peaxi162Scf00314g01040 Petunia axillaris HOM05D006171 ORTHO05D007294 4.3e-130 468.4 305 75.1
Potri.003G185501 Populus trichocarpa HOM05D006171 ORTHO05D007294 5.6e-130 468.0 251 88.4
Sopen03g036650 Solanum pennellii HOM05D006171 ORTHO05D007294 7.3e-130 467.6 309 75.4
Lj5C82T4 Lonicera japonica HOM05D006171 ORTHO05D007294 9.6e-130 467.2 250 88.0
Nitab4.5_0004738g0050 Nicotiana tabacum HOM05D006171 ORTHO05D007294 1.6e-129 466.5 309 74.8
PGR102G1595 Punica granatum HOM05D006171 ORTHO05D007294 1.6e-129 466.5 251 87.3
Potri.003G185901 Populus trichocarpa HOM05D006171 ORTHO05D007294 2.8e-129 465.7 251 88.0
Manes.11G069800 Manihot esculenta HOM05D006171 ORTHO05D007294 1.8e-128 463.0 251 87.3
PGSC0003DMG400014158 Solanum tuberosum HOM05D006171 ORTHO05D007294 2.4e-128 462.6 295 76.6
FvH4_6g28180 Fragaria vesca HOM05D006171 ORTHO05D007294 4.0e-128 461.8 302 75.2
FAN09G0753 Fragaria x ananassa HOM05D006171 ORTHO05D007294 5.2e-128 461.5 302 75.2
FAN14G3270 Fragaria x ananassa HOM05D006171 ORTHO05D007294 5.2e-128 461.5 302 75.2
Thecc.06G048100 Theobroma cacao HOM05D006171 ORTHO05D007294 5.2e-128 461.5 251 86.5
Migut.D01148 Erythranthe guttata HOM05D006171 ORTHO05D007294 8.9e-128 460.7 309 73.8
Potri.001G040100 Populus trichocarpa HOM05D006171 ORTHO05D007294 8.9e-128 460.7 251 86.9
Sabra03G0135700 Salix brachista HOM05D006171 ORTHO05D007294 8.9e-128 460.7 258 86.4
MSTRG.9390 Avicennia marina HOM05D006171 ORTHO05D007294 1.2e-127 460.3 309 73.8
Cfa001846 Carpinus fangiana HOM05D006171 ORTHO05D007294 1.2e-127 460.3 251 86.9
Ah.09g231760 Amaranthus hybridus HOM05D006171 ORTHO05D007294 3.4e-127 458.8 251 86.1
RcHm_v2.0_Chr2g0132161 Rosa chinensis HOM05D006171 ORTHO05D007294 3.4e-127 458.8 306 76.5
COL.COLO4_26789 Corchorus olitorius HOM05D006171 ORTHO05D007294 9.9e-127 457.2 251 86.9
TWI12G1342 Tripterygium wilfordii HOM05D006171 ORTHO05D007294 9.9e-127 457.2 251 85.7
Gohir.D05G117900 Gossypium hirsutum HOM05D006171 ORTHO05D007294 1.3e-126 456.8 251 86.1
Eucgr.F03988 Eucalyptus grandis HOM05D006171 ORTHO05D007294 2.2e-126 456.1 251 86.9
ECA232G3902 Erigeron canadensis HOM05D006171 ORTHO05D007294 3.8e-126 455.3 250 85.2
Lsat_1_v5_gn_4_84921 Lactuca sativa HOM05D006171 ORTHO05D007294 4.9e-126 454.9 250 84.8
Prupe.3G104600 Prunus persica HOM05D006171 ORTHO05D007294 4.9e-126 454.9 251 84.9
Duzib235G0222 Durio zibethinus HOM05D006171 ORTHO05D007294 1.1e-125 453.8 251 85.7
THA.LOC104812426 Tarenaya hassleriana HOM05D006171 ORTHO05D007294 1.9e-125 453.0 251 84.9
Sc10g0006500 Simmondsia chinensis HOM05D006171 ORTHO05D007294 2.4e-125 452.6 251 84.9
GSVIVG01016093001 Vitis vinifera HOM05D006171 ORTHO05D007294 1.2e-124 450.3 243 87.2
TAR626G1848 Trochodendron aralioides HOM05D006171 ORTHO05D007294 2.7e-124 449.1 251 86.1
AUR62002650 Chenopodium quinoa HOM05D006171 ORTHO05D007294 3.5e-124 448.7 250 83.6
MD09G1228700 Malus domestica HOM05D006171 ORTHO05D007294 3.5e-124 448.7 308 74.4
Hund22405 Selenicereus undatus HOM05D006171 ORTHO05D007294 4.6e-124 448.4 252 84.9
unitig_62.g23820 Utricularia gibba HOM05D006171 ORTHO05D007294 6.0e-124 448.0 309 71.5
Oeu003115.1 Olea europaea HOM05D006171 ORTHO05D007294 7.8e-124 447.6 243 86.8
Oeu003116.1 Olea europaea HOM05D006171 ORTHO05D007294 7.8e-124 447.6 243 86.8
CiPaw.01G256900 Carya illinoinensis HOM05D006171 ORTHO05D007294 1.3e-123 446.8 251 83.7
A09p61030 Brassica napus HOM05D000031 ORTHO05D007294 1.7e-123 446.4 250 82.8
BraA09t41476Z Brassica rapa HOM05D000031 ORTHO05D007294 1.7e-123 446.4 250 82.8
Cpa.g.sc95.67 Carica papaya HOM05D006171 ORTHO05D007294 1.7e-123 446.4 251 84.1
Atru.chr1.2816 Acer truncatum HOM05D006171 ORTHO05D007294 2.3e-123 446.0 252 85.3
CSS0033272 Camellia sinensis var. sinensis HOM05D006171 ORTHO05D007294 2.3e-123 446.0 308 76.6
BraA06t24379Z Brassica rapa HOM05D006171 ORTHO05D007294 3.0e-123 445.7 251 82.9
CsaV3_7G031750 Cucumis sativus L. HOM05D006171 ORTHO05D007294 3.0e-123 445.7 251 84.1
Nn2g12468 Nelumbo nucifera HOM05D006171 ORTHO05D007294 3.0e-123 445.7 251 84.9
Sp1g14390 Schrenkiella parvula HOM05D006171 ORTHO05D007294 3.9e-123 445.3 251 82.5
Thhalv10008259m.g Eutrema salsugineum HOM05D006171 ORTHO05D007294 5.1e-123 444.9 251 82.5
MELO3C023482.2 Cucumis melo HOM05D006171 ORTHO05D007294 6.6e-123 444.5 251 83.7
HanXRQChr16g0499501 Helianthus annuus HOM05D006171 ORTHO05D007294 6.6e-123 444.5 250 83.2
AL1G28240 Arabidopsis lyrata HOM05D006171 ORTHO05D007294 8.7e-123 444.1 251 82.1
A06p12100 Brassica napus HOM05D006171 ORTHO05D007294 8.7e-123 444.1 251 82.5
Carub.0001s1588 Capsella rubella HOM05D006171 ORTHO05D007294 1.5e-122 443.4 251 82.1
AT1G16080 Arabidopsis thaliana HOM05D006171 ORTHO05D007294 1.9e-122 443.0 251 81.7
Ciclev10025944m.g Citrus clementina HOM05D006171 ORTHO05D007294 3.3e-122 442.2 251 84.1
BcaB02g06590 Brassica carinata HOM05D006171 ORTHO05D007294 4.3e-122 441.8 251 82.1
Aqoxy7G02339 Aquilegia oxysepala HOM05D006171 ORTHO05D007294 7.3e-122 441.0 251 81.7
C08p44630 Brassica napus HOM05D000031 ORTHO05D007294 9.6e-122 440.7 250 81.2
BolC5t30159H Brassica oleracea HOM05D006171 ORTHO05D007294 9.6e-122 440.7 251 81.3
BolC8t52009H Brassica oleracea HOM05D000031 ORTHO05D007294 9.6e-122 440.7 250 81.2
BcaC05g25605 Brassica carinata HOM05D006171 ORTHO05D007294 1.6e-121 439.9 251 81.3
ClCG09G003450 Citrullus lanatus HOM05D006171 ORTHO05D007294 2.1e-121 439.5 251 82.1
Potri.001G041140 Populus trichocarpa HOM05D006171 ORTHO05D007294 8.1e-121 437.6 251 84.1
arahy.Tifrunner.gnm1.ann1.B85C5A Arachis hypogaea HOM05D006171 ORTHO05D007294 4.0e-120 435.3 308 71.1
arahy.Tifrunner.gnm1.ann1.F1WQ27 Arachis hypogaea HOM05D006171 ORTHO05D007294 5.3e-120 434.9 308 71.1
C05p14280 Brassica napus HOM05D006171 ORTHO05D007294 5.3e-120 434.9 251 80.9
Lj3g0005429 Lotus japonicus HOM05D006171 ORTHO05D007294 1.5e-119 433.3 251 81.3
AUR62034059 Chenopodium quinoa HOM05D006171 ORTHO05D007294 3.4e-119 432.2 294 71.8
VMungo1309G0227 Vigna mungo HOM05D006171 ORTHO05D007294 4.4e-119 431.8 251 80.1
HPP92_021945 Vanilla planifolia HOM05D006171 ORTHO05D007294 7.6e-119 431.0 251 81.3
Cc04_g05360 Coffea canephora HOM05D006171 ORTHO05D007294 9.9e-119 430.6 243 83.5
BcaB03g14506 Brassica carinata HOM05D000031 ORTHO05D007294 4.9e-118 428.3 251 79.7
Glyma.08G220900 Glycine max HOM05D006171 ORTHO05D007294 4.9e-118 428.3 251 80.1
Lalb_Chr25g0278721 Lupinus albus HOM05D006171 ORTHO05D007294 2.4e-117 426.0 251 81.7
Glyma.07G020900 Glycine max HOM05D006171 ORTHO05D007294 4.2e-117 425.2 251 80.1
Medtr4g007910 Medicago truncatula HOM05D006171 ORTHO05D007294 4.2e-117 425.2 251 79.3
MBI14_g16440_MAGBIO Magnolia biondii HOM05D006171 ORTHO05D007294 5.4e-117 424.9 251 80.9
Phvul.009G155700 Phaseolus vulgaris HOM05D006171 ORTHO05D007294 1.2e-116 423.7 251 78.5
Aa31LG7G650 Aethionema arabicum HOM05D006171 ORTHO05D007294 3.5e-116 422.2 251 78.5
Psat7g260440 Pisum sativum HOM05D006171 ORTHO05D007294 3.5e-116 422.2 251 78.9
Zm00001eb177930 Zea mays HOM05D006171 ORTHO05D007294 4.6e-116 421.8 252 80.6
Phvul.008G253700 Phaseolus vulgaris HOM05D006171 ORTHO05D007294 7.9e-116 421.0 251 78.5
VMungo0647G1588 Vigna mungo HOM05D006171 ORTHO05D007294 1.0e-115 420.6 251 78.5
CDE07G0158 Ceratophyllum demersum HOM05D006171 ORTHO05D007294 5.6e-114 414.8 251 77.7
EL10Ac8g19420 Beta vulgaris HOM05D006171 ORTHO05D007294 1.1e-104 384.0 250 74.4
Pp3c1_40240 Physcomitrium patens HOM05D006171 ORTHO05D007294 3.1e-104 382.5 250 72.0
Gorai.009G121800 Gossypium raimondii HOM05D006171 ORTHO05D007294 5.8e-103 378.3 215 84.7
CBR_g3722 Chara braunii HOM05D006171 ORTHO05D007294 1.6e-100 370.2 251 69.3
SMO356G0223 Selaginella moellendorffii HOM05D006171 ORTHO05D007294 2.3e-99 366.3 251 68.1
Mapoly0047s0137 Marchantia polymorpha HOM05D006171 ORTHO05D007294 7.4e-98 361.3 250 66.0
CBR_g39222 Chara braunii HOM05D006171 ORTHO05D007294 6.2e-97 358.2 246 67.9
FAN05G3051 Fragaria x ananassa HOM05D006171 ORTHO05D007294 1.4e-96 357.1 277 67.1
Dinv21434 Davidia involucrata HOM05D006171 ORTHO05D007294 2.9e-94 349.4 186 91.9
Os08g0266300 Oryza sativa ssp. japonica HOM05D006171 ORTHO05D007294 6.5e-94 348.2 231 75.3
HanXRQChr16g0499491 Helianthus annuus HOM05D006171 ORTHO05D007294 2.5e-93 346.3 252 64.7
CANSAT64G1829 Cannabis sativa HOM05D006171 ORTHO05D007294 1.2e-92 344.0 192 84.4
MD17G1227100 Malus domestica HOM05D006171 ORTHO05D007294 4.6e-92 342.0 190 85.3
PSO017G5952 Papaver somniferum HOM05D006171 ORTHO05D007294 1.8e-88 330.1 192 80.2
ATR0580G215 Amborella trichopoda HOM05D006171 ORTHO05D007294 4.1e-88 328.9 190 81.1
PSO170G6342 Papaver somniferum HOM05D006171 ORTHO05D007294 9.0e-88 327.8 192 79.7
MCO15G666 Micromonas commoda HOM05D006171 ORTHO05D007294 1.2e-84 317.4 253 61.7
PRCOL_00006061 Prasinoderma coloniale HOM05D006171 ORTHO05D007294 1.8e-83 313.5 243 61.7
Cre10.g435850 Chlamydomonas reinhardtii HOM05D006171 ORTHO05D007294 3.3e-82 309.3 251 61.4
Gohir.A05G117000 Gossypium hirsutum HOM05D006171 ORTHO05D007294 1.8e-80 303.5 169 83.4
AagrBONN_evm.TU.Sc2ySwM_344.694 Anthoceros agrestis HOM05D006171 ORTHO05D007294 3.4e-79 299.3 213 68.1
QL05p037111 Quercus lobata HOM05D006171 ORTHO05D007294 5.0e-78 295.4 176 79.5
Hma1.2p1_2173F.1_g316040 Hydrangea macrophylla HOM05D006171 ORTHO05D007294 2.0e-74 283.5 197 73.1
Rhsim12G0183600 Rhododendron simsii HOM05D006171 ORTHO05D007294 1.3e-65 254.2 256 57.4
Aqoxy6G02563 Aquilegia oxysepala HOM05D006171 ORTHO05D007294 4.8e-65 252.3 246 53.3
RcHm_v2.0_Chr2g0132191 Rosa chinensis HOM05D006171 ORTHO05D007294 3.8e-62 242.7 188 65.4
Sed0008158 Sechium edule HOM05D006171 ORTHO05D007294 1.2e-55 221.1 126 81.0
QL05p037113 Quercus lobata HOM05D006171 ORTHO05D007294 1.0e-35 154.8 85 83.5
AagrBONN_evm.TU.Sc2ySwM_344.1199 Anthoceros agrestis HOM05D006171 ORTHO05D007294 1.3e-33 147.9 266 36.8
CDE04G3654 Ceratophyllum demersum HOM05D006171 ORTHO05D007294 7.8e-31 138.7 109 61.5
Cre03.g167050 Chlamydomonas reinhardtii HOM05D006171 ORTHO05D007294 1.1e-21 108.2 312 29.5
PRCOL_00003410 Prasinoderma coloniale HOM05D006171 ORTHO05D007294 5.6e-21 105.9 253 34.0
SEGI_00638 Sequoiadendron giganteum HOM05D006171 ORTHO05D007294 5.6e-21 105.9 65 75.4
arahy.Tifrunner.gnm1.ann1.VYJR5C Arachis hypogaea HOM05D006171 ORTHO05D007294 1.1e-16 91.7 104 55.8
RcHm_v2.0_Chr2g0132221 Rosa chinensis HOM05D006171 ORTHO05D007294 1.9e-16 90.9 53 69.8
Nn5g31109 Nelumbo nucifera HOM05D006171 ORTHO05D007294 1.4e-11 74.7 50 74.0


User provided reference genes

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