Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16782 Vaccinium macrocarpon HOM05D006346 ORTHO05D007910 0.0e+00 1733.0 876 100.0
Rhsim01G0026600 Rhododendron simsii HOM05D006346 ORTHO05D007910 0.0e+00 1225.7 708 87.1
CSS0042716 Camellia sinensis var. sinensis HOM05D006346 ORTHO05D007910 0.0e+00 1082.8 710 79.2
Dinv42829 Davidia involucrata HOM05D006346 ORTHO05D007910 2.7e-302 1042.0 709 75.6
Dinv43271 Davidia involucrata HOM05D006346 ORTHO05D007910 2.7e-302 1042.0 709 75.6
Hma1.2p1_0028F.1_g017690 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 7.5e-297 1023.8 675 76.6
Lj9A719T56 Lonicera japonica HOM05D006346 ORTHO05D007910 6.4e-296 1020.8 678 76.4
HanXRQChr10g0313691 Helianthus annuus HOM05D006346 ORTHO05D007910 1.7e-288 996.1 679 74.2
Atru.chr7.350 Acer truncatum HOM05D006346 ORTHO05D007910 1.0e-285 986.9 669 73.8
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 1.1e-284 983.4 736 68.8
Cfa020798 Carpinus fangiana HOM05D006346 ORTHO05D007910 2.3e-282 975.7 680 72.5
Nn8g39991 Nelumbo nucifera HOM05D006346 ORTHO05D007910 2.3e-282 975.7 713 70.3
Nitab4.5_0003551g0040 Nicotiana tabacum HOM05D006346 ORTHO05D007910 1.2e-281 973.4 692 71.4
Sopen07g001980 Solanum pennellii HOM05D006346 ORTHO05D007910 1.4e-279 966.5 689 71.0
Ciclev10007623m.g Citrus clementina HOM05D006346 ORTHO05D007910 1.9e-279 966.1 669 71.6
CiPaw.15G165500 Carya illinoinensis HOM05D006346 ORTHO05D007910 4.1e-279 964.9 714 69.5
Thecc.09G152100 Theobroma cacao HOM05D006346 ORTHO05D007910 7.8e-278 960.7 683 70.9
COL.COLO4_23953 Corchorus olitorius HOM05D006346 ORTHO05D007910 1.7e-277 959.5 683 71.0
CANSAT11G2498 Cannabis sativa HOM05D006346 ORTHO05D007910 3.0e-277 958.7 675 72.1
Actinidia38309 Actinidia chinensis HOM05D006346 ORTHO05D007910 6.6e-277 957.6 601 80.5
Potri.018G103700 Populus trichocarpa HOM05D006346 ORTHO05D007910 2.5e-276 955.7 711 68.9
Lalb_Chr08g0234231 Lupinus albus HOM05D006346 ORTHO05D007910 2.1e-275 952.6 679 70.4
CAN.G160.15 Capsicum annuum HOM05D006346 ORTHO05D007910 3.6e-275 951.8 690 71.0
Lsat_1_v5_gn_5_89421 Lactuca sativa HOM05D006346 ORTHO05D007910 1.4e-274 949.9 677 71.5
QL02p093888 Quercus lobata HOM05D006346 ORTHO05D007910 4.0e-274 948.3 675 72.0
ECA234G1139 Erigeron canadensis HOM05D006346 ORTHO05D007910 5.8e-273 944.5 669 70.1
RcHm_v2.0_Chr2g0085271 Rosa chinensis HOM05D006346 ORTHO05D007910 1.3e-272 943.3 664 70.6
FAN28G1995 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.7e-272 943.0 712 67.6
Prupe.7G265700 Prunus persica HOM05D006346 ORTHO05D007910 1.7e-272 943.0 664 71.8
Gorai.012G099000 Gossypium raimondii HOM05D006346 ORTHO05D007910 2.2e-272 942.6 676 70.3
Glyma.07G102300 Glycine max HOM05D006346 ORTHO05D007910 3.8e-272 941.8 675 69.9
FvH4_1g00650 Fragaria vesca HOM05D006346 ORTHO05D007910 4.9e-272 941.4 712 67.6
Gohir.A04G059826 Gossypium hirsutum HOM05D006346 ORTHO05D007910 4.9e-272 941.4 683 70.1
Gohir.D04G088700 Gossypium hirsutum HOM05D006346 ORTHO05D007910 6.4e-272 941.0 683 69.5
PGR102G0252 Punica granatum HOM05D006346 ORTHO05D007910 1.0e-269 933.7 682 69.4
GSVIVG01008451001 Vitis vinifera HOM05D006346 ORTHO05D007910 1.7e-269 932.9 700 69.7
FAN26G0534 Fragaria x ananassa HOM05D006346 ORTHO05D007910 2.3e-269 932.6 709 67.8
Nitab4.5_0002611g0100 Nicotiana tabacum HOM05D006346 ORTHO05D007910 3.9e-269 931.8 690 69.3
AUR62028356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 1.5e-268 929.9 708 67.1
Hund08940 Selenicereus undatus HOM05D006346 ORTHO05D007910 1.5e-268 929.9 700 68.3
TWI34G0405 Tripterygium wilfordii HOM05D006346 ORTHO05D007910 4.3e-268 928.3 669 71.3
Aqoxy7G03359 Aquilegia oxysepala HOM05D006346 ORTHO05D007910 5.6e-268 927.9 678 71.4
Haze_19155 Corylus avellana HOM05D006346 ORTHO05D007910 5.6e-268 927.9 686 69.7
Sabra18G0089100 Salix brachista HOM05D006346 ORTHO05D007910 1.6e-267 926.4 716 66.9
MSTRG.6156 Avicennia marina HOM05D006346 ORTHO05D007910 3.6e-267 925.2 675 68.7
Sed0021167 Sechium edule HOM05D006346 ORTHO05D007910 3.6e-267 925.2 685 68.6
EL10Ac8g18923 Beta vulgaris HOM05D006346 ORTHO05D007910 8.1e-267 924.1 685 68.3
Cc06_g14630 Coffea canephora HOM05D006346 ORTHO05D007910 8.1e-267 924.1 673 70.7
Lj6g0013256 Lotus japonicus HOM05D006346 ORTHO05D007910 1.8e-266 922.9 671 69.2
arahy.Tifrunner.gnm1.ann1.ID3JIZ Arachis hypogaea HOM05D006346 ORTHO05D007910 5.2e-266 921.4 679 68.5
Medtr8g467050 Medicago truncatula HOM05D006346 ORTHO05D007910 2.0e-265 919.5 675 68.1
Phvul.003G072700 Phaseolus vulgaris HOM05D006346 ORTHO05D007910 5.8e-265 917.9 670 68.8
ClCG02G014350 Citrullus lanatus HOM05D006346 ORTHO05D007910 4.9e-264 914.8 689 68.1
THA.LOC104803912 Tarenaya hassleriana HOM05D006346 ORTHO05D007910 8.4e-264 914.1 672 69.6
Migut.J01382 Erythranthe guttata HOM05D006346 ORTHO05D007910 1.1e-263 913.7 676 69.1
PSO782G0769 Papaver somniferum HOM05D006346 ORTHO05D007910 1.1e-263 913.7 675 69.8
AT4G30720 Arabidopsis thaliana HOM05D006346 ORTHO05D007910 7.1e-263 911.0 681 68.7
CsaV3_2G007650 Cucumis sativus L. HOM05D006346 ORTHO05D007910 7.1e-263 911.0 726 65.4
PSO063G0785 Papaver somniferum HOM05D006346 ORTHO05D007910 2.1e-262 909.4 675 68.9
AL7G21400 Arabidopsis lyrata HOM05D006346 ORTHO05D007910 6.0e-262 907.9 680 68.2
Thhalv10024548m.g Eutrema salsugineum HOM05D006346 ORTHO05D007910 6.0e-262 907.9 681 68.1
BcaNung01563 Brassica carinata HOM05D006346 ORTHO05D007910 1.7e-261 906.4 714 65.8
Carub.0007s0978 Capsella rubella HOM05D006346 ORTHO05D007910 2.3e-261 906.0 681 68.3
SGA_v2.0_scaffold45G17017 Striga asiatica HOM05D006346 ORTHO05D007910 1.5e-260 903.3 704 66.6
BolC7t46278H Brassica oleracea HOM05D006346 ORTHO05D007910 2.5e-260 902.5 679 67.5
BcaNung02744 Brassica carinata HOM05D006346 ORTHO05D007910 3.6e-259 898.7 685 67.3
Ca_22901_v3 Cicer arietinum L. HOM05D006346 ORTHO05D007910 3.6e-259 898.7 681 67.4
A03p60280 Brassica napus HOM05D006346 ORTHO05D007910 4.8e-259 898.3 681 67.4
BraA03t15070Z Brassica rapa HOM05D006346 ORTHO05D007910 6.2e-259 897.9 681 67.4
C07p58190 Brassica napus HOM05D006346 ORTHO05D007910 1.8e-258 896.3 680 67.5
Aa31LG2G19630 Aethionema arabicum HOM05D006346 ORTHO05D007910 1.7e-256 889.8 686 67.1
Oeu052219.3 Olea europaea HOM05D006346 ORTHO05D007910 3.8e-256 888.6 758 62.5
Sp7g28630 Schrenkiella parvula HOM05D006346 ORTHO05D007910 4.2e-255 885.2 672 68.0
FAN23G2716 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.8e-253 879.8 702 65.2
MELO3C004121.2 Cucumis melo HOM05D006346 ORTHO05D007910 1.9e-252 876.3 744 62.2
Os05g0411200 Oryza sativa ssp. japonica HOM05D006346 ORTHO05D007910 2.2e-248 862.8 675 66.7
MD02G1005300 Malus domestica HOM05D006346 ORTHO05D007910 1.8e-245 853.2 599 71.8
Solyc07g005870.3 Solanum lycopersicum HOM05D006346 ORTHO05D007910 6.7e-245 851.3 688 65.1
HPP92_020605 Vanilla planifolia HOM05D006346 ORTHO05D007910 7.4e-244 847.8 674 64.1
CDE12G0948 Ceratophyllum demersum HOM05D006346 ORTHO05D007910 1.0e-240 837.4 724 62.7
Peaxi162Scf00401g00218 Petunia axillaris HOM05D006346 ORTHO05D007910 6.7e-237 824.7 673 65.5
ATR0739G030 Amborella trichopoda HOM05D006346 ORTHO05D007910 1.1e-236 823.9 593 69.1
Ah.09g228750 Amaranthus hybridus HOM05D006346 ORTHO05D007910 1.5e-236 823.5 675 62.5
Zm00001eb288040 Zea mays HOM05D006346 ORTHO05D007910 1.6e-235 820.1 700 61.4
arahy.Tifrunner.gnm1.ann1.VMKR8Z Arachis hypogaea HOM05D006346 ORTHO05D007910 2.2e-232 809.7 587 69.0
Sc14g0000950 Simmondsia chinensis HOM05D006346 ORTHO05D007910 3.6e-230 802.4 576 70.7
SalBow1G6401 Salvia bowleyana HOM05D006346 ORTHO05D007910 1.0e-229 800.8 571 69.9
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 1.0e-224 784.3 629 64.4
Psat4g134640 Pisum sativum HOM05D006346 ORTHO05D007910 2.7e-222 776.2 591 66.5
Manes.14G142800 Manihot esculenta HOM05D006346 ORTHO05D007910 3.8e-216 755.7 575 67.3
TPR.G10032 Trifolium pratense HOM05D006346 ORTHO05D007910 5.7e-196 688.7 1259 37.2
Pp3c23_14180 Physcomitrium patens HOM05D006346 ORTHO05D007910 5.4e-186 655.6 623 55.1
Mapoly0021s0085 Marchantia polymorpha HOM05D006346 ORTHO05D007910 1.1e-183 647.9 640 54.8
Hma1.2p1_0028F.1_g017700 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 1.4e-181 641.0 431 74.9
AagrBONN_evm.TU.Sc2ySwM_344.1120 Anthoceros agrestis HOM05D006346 ORTHO05D007910 7.5e-180 635.2 646 51.9
SMO146G0018 Selaginella moellendorffii HOM05D006346 ORTHO05D007910 2.9e-179 633.3 610 54.1
Cpa.g.sc46.182 Carica papaya HOM05D006346 ORTHO05D007910 4.6e-161 572.8 400 72.0
TAR383G0381 Trochodendron aralioides HOM05D006346 ORTHO05D007910 2.7e-153 547.0 425 67.5
Glyma.04G155100 Glycine max HOM05D006346 ORTHO05D007910 5.1e-152 542.7 401 67.1
Cre17.g744997 Chlamydomonas reinhardtii HOM05D006346 ORTHO05D007910 6.0e-137 492.7 726 42.1
PRCOL_00000449 Prasinoderma coloniale HOM05D006346 ORTHO05D007910 5.3e-133 479.6 614 46.3
MCO14G279 Micromonas commoda HOM05D006346 ORTHO05D007910 7.9e-129 465.7 476 52.3
Eucgr.C02507 Eucalyptus grandis HOM05D006346 ORTHO05D007910 3.9e-128 463.4 332 69.0
VMungo0251G1020 Vigna mungo HOM05D006346 ORTHO05D007910 1.2e-108 398.7 273 71.1
TAR383G0466 Trochodendron aralioides HOM05D006346 ORTHO05D007910 9.1e-101 372.5 225 82.7
Eucgr.C02508 Eucalyptus grandis HOM05D006346 ORTHO05D007910 9.7e-95 352.4 292 62.7
AUR62025356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 6.3e-94 349.7 314 59.9
CAN.G160.19 Capsicum annuum HOM05D006346 ORTHO05D007910 7.7e-92 342.8 458 46.5
Actinidia24372 Actinidia chinensis HOM05D006346 ORTHO05D007910 8.0e-89 332.8 626 37.7
PGSC0003DMG400011203 Solanum tuberosum HOM05D006346 ORTHO05D007910 8.2e-86 322.8 203 78.8
Cpa.g.sc46.183 Carica papaya HOM05D006346 ORTHO05D007910 2.5e-82 311.2 263 63.9
AUR62025355 Chenopodium quinoa HOM05D006346 ORTHO05D007910 2.3e-80 304.7 203 74.4
CARHR238600 Cardamine hirsuta HOM05D006346 ORTHO05D007910 1.1e-74 285.8 257 59.9
FAN23G0300 Fragaria x ananassa HOM05D006346 ORTHO05D007910 3.6e-57 227.6 155 71.0
SEGI_02941 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 1.9e-50 205.3 146 70.5
Glyma.04G155150 Glycine max HOM05D006346 ORTHO05D007910 5.1e-43 180.6 146 61.6
CAN.G1961.3 Capsicum annuum HOM05D006346 ORTHO05D007910 8.6e-43 179.9 203 52.2
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 7.3e-34 150.2 115 73.0
MD15G1149600 Malus domestica HOM05D006346 ORTHO05D007910 1.4e-32 146.0 166 50.6
SEGI_30041 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 6.4e-30 137.1 106 64.2
SalBow1G2918 Salvia bowleyana HOM05D006346 ORTHO05D007910 3.1e-24 118.2 96 59.4
Glyma.04G155200 Glycine max HOM05D006346 ORTHO05D007910 5.3e-24 117.5 101 62.4
SEGI_23921 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 9.3e-21 106.7 124 41.9
ECA238G2318 Erigeron canadensis HOM05D006346 ORTHO05D007910 1.1e-16 93.2 68 66.2
HanXRQChr01g0001911 Helianthus annuus HOM05D006346 ORTHO05D007910 5.3e-16 90.9 53 79.2
A05p44400 Brassica napus HOM05D034890 ORTHO05D100541 2.3e-11 75.5 69 55.1


User provided reference genes

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