Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 7.3e-192 673.7 334 100.0
Rhsim12G0174600 Rhododendron simsii HOM05D006563 ORTHO05D008154 9.5e-83 311.2 327 56.3
Actinidia08872 Actinidia chinensis HOM05D006563 ORTHO05D008154 1.5e-72 277.3 328 51.2
Oeu040847.2 Olea europaea HOM05D006563 ORTHO05D008154 6.4e-71 271.9 338 47.9
Dinv23146 Davidia involucrata HOM05D006563 ORTHO05D008154 1.2e-69 267.7 336 49.4
TAR374G0821 Trochodendron aralioides HOM05D006563 ORTHO05D008154 1.3e-68 264.2 331 49.5
FAN08G2924 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.1e-67 261.2 330 48.2
CSS0042372 Camellia sinensis var. sinensis HOM05D006563 ORTHO05D008154 2.5e-67 260.0 330 48.5
QL10p002894 Quercus lobata HOM05D006563 ORTHO05D008154 9.5e-67 258.1 329 49.2
FAN04G0682 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.8e-66 256.5 330 46.4
TWI39G0919 Tripterygium wilfordii HOM05D006563 ORTHO05D008154 3.6e-66 256.1 328 48.5
GSVIVG01008544001 Vitis vinifera HOM05D006563 ORTHO05D008154 3.6e-66 256.1 335 47.5
Ca_26101_v3 Cicer arietinum L. HOM05D006563 ORTHO05D008154 4.7e-66 255.8 328 48.5
Ciclev10032657m.g Citrus clementina HOM05D006563 ORTHO05D008154 4.7e-66 255.8 334 48.2
FAN18G2834 Fragaria x ananassa HOM05D006563 ORTHO05D008154 4.7e-66 255.8 330 46.1
FAN04G3009 Fragaria x ananassa HOM05D006563 ORTHO05D008154 8.1e-66 255.0 330 46.4
FAN13G1867 Fragaria x ananassa HOM05D006563 ORTHO05D008154 8.1e-66 255.0 330 46.4
MD14G1156900 Malus domestica HOM05D006563 ORTHO05D008154 1.1e-65 254.6 330 47.0
Prupe.5G150900 Prunus persica HOM05D006563 ORTHO05D008154 1.4e-65 254.2 330 47.0
CANSAT80G0303 Cannabis sativa HOM05D006563 ORTHO05D008154 1.8e-65 253.8 333 46.5
FvH4_5g08340 Fragaria vesca HOM05D006563 ORTHO05D008154 2.3e-65 253.4 330 45.8
Peaxi162Scf00089g00627 Petunia axillaris HOM05D006563 ORTHO05D008154 3.1e-65 253.1 331 47.1
Lj4g0002806 Lotus japonicus HOM05D006563 ORTHO05D008154 6.8e-65 251.9 328 48.2
Hma1.2p1_0426F.1_g150610 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 8.9e-65 251.5 336 48.2
Solyc03g111350.3 Solanum lycopersicum HOM05D006563 ORTHO05D008154 8.9e-65 251.5 331 47.7
MELO3C002362.2 Cucumis melo HOM05D006563 ORTHO05D008154 1.5e-64 250.8 336 45.8
ClCG03G003770 Citrullus lanatus HOM05D006563 ORTHO05D008154 2.6e-64 250.0 329 46.5
Carub.0005s1473 Capsella rubella HOM05D006563 ORTHO05D008154 3.4e-64 249.6 329 46.2
Glyma.05G048400 Glycine max HOM05D006563 ORTHO05D008154 3.4e-64 249.6 330 47.3
Manes.06G119700 Manihot esculenta HOM05D006563 ORTHO05D008154 3.4e-64 249.6 332 46.1
Nn4g22315 Nelumbo nucifera HOM05D006563 ORTHO05D008154 3.4e-64 249.6 335 47.2
Sopen03g030480 Solanum pennellii HOM05D006563 ORTHO05D008154 3.4e-64 249.6 336 47.0
SGA_v2.0_scaffold7G04149 Striga asiatica HOM05D006563 ORTHO05D008154 3.4e-64 249.6 327 46.8
Migut.D01965 Erythranthe guttata HOM05D006563 ORTHO05D008154 4.4e-64 249.2 329 47.4
Nitab4.5_0004750g0020 Nicotiana tabacum HOM05D006563 ORTHO05D008154 4.4e-64 249.2 336 45.2
Potri.015G096400 Populus trichocarpa HOM05D006563 ORTHO05D008154 4.4e-64 249.2 337 46.9
PGSC0003DMG400015182 Solanum tuberosum HOM05D006563 ORTHO05D008154 5.8e-64 248.8 331 47.1
Nitab4.5_0003282g0060 Nicotiana tabacum HOM05D006563 ORTHO05D008154 7.5e-64 248.4 328 46.3
Cpa.g.sc13.115 Carica papaya HOM05D006563 ORTHO05D008154 9.8e-64 248.1 330 46.1
Atru.chr6.1794 Acer truncatum HOM05D006563 ORTHO05D008154 1.3e-63 247.7 330 46.7
Oeu036009.4 Olea europaea HOM05D006563 ORTHO05D008154 1.3e-63 247.7 332 46.4
RcHm_v2.0_Chr7g0190121 Rosa chinensis HOM05D006563 ORTHO05D008154 1.7e-63 247.3 330 46.4
CsaV3_1G009660 Cucumis sativus L. HOM05D006563 ORTHO05D008154 2.2e-63 246.9 336 45.5
CAN.G352.13 Capsicum annuum HOM05D006563 ORTHO05D008154 3.7e-63 246.1 331 46.2
Psat4g066200 Pisum sativum HOM05D006563 ORTHO05D008154 3.7e-63 246.1 328 47.0
Aqoxy5G03376 Aquilegia oxysepala HOM05D006563 ORTHO05D008154 6.4e-63 245.4 339 45.7
BcaB05g23009 Brassica carinata HOM05D006563 ORTHO05D008154 6.4e-63 245.4 327 44.6
Sp5g13440 Schrenkiella parvula HOM05D006563 ORTHO05D008154 8.3e-63 245.0 326 44.5
Sabra15G0117200 Salix brachista HOM05D006563 ORTHO05D008154 1.1e-62 244.6 333 45.6
Gorai.008G206400 Gossypium raimondii HOM05D006563 ORTHO05D008154 1.4e-62 244.2 330 46.4
Gohir.D12G192100 Gossypium hirsutum HOM05D006563 ORTHO05D008154 2.4e-62 243.4 330 46.4
A01p25680 Brassica napus HOM05D006563 ORTHO05D008154 3.2e-62 243.0 327 44.0
BraA01t02447Z Brassica rapa HOM05D006563 ORTHO05D008154 3.2e-62 243.0 327 44.0
Thhalv10010696m.g Eutrema salsugineum HOM05D006563 ORTHO05D008154 3.2e-62 243.0 331 44.4
Medtr4g103300 Medicago truncatula HOM05D006563 ORTHO05D008154 3.2e-62 243.0 337 45.4
Phvul.003G211300 Phaseolus vulgaris HOM05D006563 ORTHO05D008154 3.2e-62 243.0 328 46.6
AL5G27990 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 4.1e-62 242.7 331 44.1
BcaC09g49875 Brassica carinata HOM05D006563 ORTHO05D008154 4.1e-62 242.7 327 44.0
C01p32250 Brassica napus HOM05D006563 ORTHO05D008154 4.1e-62 242.7 327 44.0
Gohir.A12G189700 Gossypium hirsutum HOM05D006563 ORTHO05D008154 4.1e-62 242.7 330 46.1
Duzib205G1898 Durio zibethinus HOM05D006563 ORTHO05D008154 5.4e-62 242.3 331 46.8
SalBow6G4201 Salvia bowleyana HOM05D006563 ORTHO05D008154 1.2e-61 241.1 328 45.4
SalBow6G4357 Salvia bowleyana HOM05D006563 ORTHO05D008154 1.2e-61 241.1 328 45.4
AUR62029612 Chenopodium quinoa HOM05D006563 ORTHO05D008154 1.6e-61 240.7 334 43.7
AT3G48540 Arabidopsis thaliana HOM05D006563 ORTHO05D008154 2.1e-61 240.4 331 43.8
BolC1t03129H Brassica oleracea HOM05D006563 ORTHO05D008154 2.1e-61 240.4 327 43.7
Eucgr.B00111 Eucalyptus grandis HOM05D006563 ORTHO05D008154 2.1e-61 240.4 342 44.2
CARHR157340 Cardamine hirsuta HOM05D006563 ORTHO05D008154 7.8e-61 238.4 329 43.8
Aa31LG4G17160 Aethionema arabicum HOM05D006563 ORTHO05D008154 1.0e-60 238.0 334 44.0
ATR0561G278 Amborella trichopoda HOM05D006563 ORTHO05D008154 1.0e-60 238.0 336 44.6
Sc04g0000640 Simmondsia chinensis HOM05D006563 ORTHO05D008154 1.3e-60 237.7 330 44.8
CDE05G1358 Ceratophyllum demersum HOM05D006563 ORTHO05D008154 1.7e-60 237.3 331 45.3
Sed0017169 Sechium edule HOM05D006563 ORTHO05D008154 2.3e-60 236.9 335 44.8
Hund02442 Selenicereus undatus HOM05D006563 ORTHO05D008154 3.0e-60 236.5 329 44.4
HanXRQChr13g0408701 Helianthus annuus HOM05D006563 ORTHO05D008154 5.1e-60 235.7 332 45.2
Thecc.03G129300 Theobroma cacao HOM05D006563 ORTHO05D008154 5.1e-60 235.7 332 46.1
MSTRG.9682 Avicennia marina HOM05D006563 ORTHO05D008154 8.6e-60 235.0 328 45.1
COL.COLO4_28130 Corchorus olitorius HOM05D006563 ORTHO05D008154 1.5e-59 234.2 332 46.1
EL10Ac5g11412 Beta vulgaris HOM05D006563 ORTHO05D008154 4.3e-59 232.6 334 42.8
AUR62034825 Chenopodium quinoa HOM05D006563 ORTHO05D008154 5.6e-59 232.3 334 42.8
MBI07_g16949_MAGBIO Magnolia biondii HOM05D006563 ORTHO05D008154 6.2e-58 228.8 328 45.7
Cc09_g04000 Coffea canephora HOM05D006563 ORTHO05D008154 1.1e-57 228.0 352 42.9
HPP92_025255 Vanilla planifolia HOM05D006563 ORTHO05D008154 4.0e-57 226.1 332 43.4
Lsat_1_v5_gn_1_28920 Lactuca sativa HOM05D006563 ORTHO05D008154 6.8e-57 225.3 330 43.6
PSO478G0702 Papaver somniferum HOM05D006563 ORTHO05D008154 2.2e-55 220.3 336 42.3
Os01g0765000 Oryza sativa ssp. japonica HOM05D006563 ORTHO05D008154 4.9e-55 219.2 335 42.7
PSO017G5417 Papaver somniferum HOM05D006563 ORTHO05D008154 1.1e-54 218.0 335 42.1
VMungo1215G3263 Vigna mungo HOM05D006563 ORTHO05D008154 1.1e-54 218.0 238 52.9
unitig_46.g18474 Utricularia gibba HOM05D006563 ORTHO05D008154 3.5e-53 213.0 333 43.5
arahy.Tifrunner.gnm1.ann1.G9M8TR Arachis hypogaea HOM05D006563 ORTHO05D008154 6.0e-53 212.2 328 41.8
PGR044G0473 Punica granatum HOM05D006563 ORTHO05D008154 6.6e-52 208.8 330 40.9
CiPaw.11G007100 Carya illinoinensis HOM05D006563 ORTHO05D008154 1.9e-51 207.2 330 41.5
SEGI_38890 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 9.6e-51 204.9 347 39.2
Potri.012G097800 Populus trichocarpa HOM05D006563 ORTHO05D008154 1.1e-49 201.4 335 41.2
arahy.Tifrunner.gnm1.ann1.76974R Arachis hypogaea HOM05D006563 ORTHO05D008154 2.0e-48 197.2 338 40.8
Haze_07139 Corylus avellana HOM05D006563 ORTHO05D008154 3.8e-47 193.0 331 40.8
Zm00001eb370270 Zea mays HOM05D006563 ORTHO05D008154 4.2e-46 189.5 240 48.8
DCAR_016389 Daucus carota HOM05D006563 ORTHO05D008154 1.3e-44 184.5 161 59.6
TPR.G19207 Trifolium pratense HOM05D006563 ORTHO05D008154 1.7e-44 184.1 161 60.9
Pp3c2_32260 Physcomitrium patens HOM05D006563 ORTHO05D008154 8.7e-44 181.8 191 50.3
Cc09_g03990 Coffea canephora HOM05D006563 ORTHO05D008154 1.1e-43 181.4 164 57.9
AagrBONN_evm.TU.Sc2ySwM_228.2386 Anthoceros agrestis HOM05D006563 ORTHO05D008154 3.6e-42 176.4 231 45.5
Lalb_Chr13g0297241 Lupinus albus HOM05D006563 ORTHO05D008154 3.6e-42 176.4 220 47.3
Sc04g0000170 Simmondsia chinensis HOM05D006563 ORTHO05D008154 8.1e-42 175.3 331 38.4
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 9.0e-41 171.8 223 45.7
Medtr4g057655 Medicago truncatula HOM05D006563 ORTHO05D008154 5.8e-40 169.1 331 36.9
Medtr4g071665 Medicago truncatula HOM05D006563 ORTHO05D008154 2.9e-39 166.8 219 45.7
SMO116G0330 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 9.3e-38 161.8 267 38.2
Lj5A96G46 Lonicera japonica HOM05D006563 ORTHO05D008154 1.1e-35 154.8 268 42.2
MCO04G397 Micromonas commoda HOM05D006563 ORTHO05D008154 1.3e-34 151.4 210 40.0
PRCOL_00002657 Prasinoderma coloniale HOM05D006563 ORTHO05D008154 8.1e-34 148.7 191 40.8
CBR_g19095 Chara braunii HOM05D006563 ORTHO05D008154 2.4e-30 137.1 174 44.8
Cre19.g750897 Chlamydomonas reinhardtii HOM05D006563 ORTHO05D008154 1.1e-27 128.3 237 35.9
SMO361G0344 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 1.0e-23 115.2 63 77.8
Hma1.2p1_0426F.1_g150600 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 4.6e-21 106.3 95 60.0
Haze_26466 Corylus avellana HOM05D006563 ORTHO05D008154 5.7e-19 99.4 184 33.7
SMO199G0092 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 7.2e-14 82.4 44 84.1
SEGI_22016 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 6.7e-12 75.9 107 42.1
AL1G65740 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 1.5e-11 74.7 130 36.9
Hma1.2p1_0426F.1_g150620 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 1.3e-10 71.6 109 45.0
vmacro06010 Vaccinium macrocarpon HOM05D000809 ORTHO05D001196 1.1e-09 68.6 56 57.1
vmacro13309 Vaccinium macrocarpon HOM05D001826 ORTHO05D004184 1.8e-09 67.8 55 60.0
MD06G1141700 Malus domestica HOM05D006563 ORTHO05D008154 3.1e-09 67.0 107 40.2
vmacro02294 Vaccinium macrocarpon HOM05D001373 ORTHO05D001330 4.1e-09 66.6 37 81.1
vmacro18325 Vaccinium macrocarpon HOM05D005231 ORTHO05D006387 6.9e-09 65.9 45 68.9
vmacro18579 Vaccinium macrocarpon HOM05D003001 ORTHO05D003494 6.9e-09 65.9 91 41.8
vmacro11662 Vaccinium macrocarpon HOM05D001622 ORTHO05D002989 1.5e-08 64.7 63 55.6
vmacro05063 Vaccinium macrocarpon HOM05D001419 ORTHO05D001376 4.5e-08 63.2 30 93.3
vmacro02184 Vaccinium macrocarpon HOM05D001453 ORTHO05D001444 5.9e-08 62.8 54 59.3
vmacro19454 Vaccinium macrocarpon HOM05D004852 ORTHO05D006128 5.9e-08 62.8 71 49.3
vmacro10622 Vaccinium macrocarpon HOM05D005467 ORTHO05D006523 7.7e-08 62.4 44 68.2
vmacro16026 Vaccinium macrocarpon HOM05D017964 ORTHO05D023176 1.0e-07 62.0 38 73.7
vmacro06073 Vaccinium macrocarpon HOM05D000331 ORTHO05D021523 1.7e-07 61.2 64 50.0
vmacro16015 Vaccinium macrocarpon HOM05D005906 ORTHO05D007359 1.7e-07 61.2 31 87.1
vmacro17718 Vaccinium macrocarpon HOM05D003484 ORTHO05D004152 1.7e-07 61.2 84 46.4
vmacro04727 Vaccinium macrocarpon HOM05D000101 ORTHO05D000089 2.9e-07 60.5 36 75.0
vmacro19800 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 2.9e-07 60.5 35 74.3
vmacro03968 Vaccinium macrocarpon HOM05D000513 ORTHO05D003825 5.0e-07 59.7 35 80.0
vmacro11032 Vaccinium macrocarpon HOM05D003679 ORTHO05D004265 5.0e-07 59.7 33 84.8
vmacro08551 Vaccinium macrocarpon HOM05D000932 ORTHO05D000729 6.5e-07 59.3 30 90.0
vmacro13488 Vaccinium macrocarpon HOM05D002629 ORTHO05D003221 6.5e-07 59.3 31 87.1
vmacro09699 Vaccinium macrocarpon HOM05D005193 ORTHO05D006316 8.5e-07 58.9 37 81.1
vmacro10605 Vaccinium macrocarpon HOM05D001245 ORTHO05D004475 1.9e-06 57.8 32 81.2
vmacro13537 Vaccinium macrocarpon HOM05D005609 ORTHO05D006871 5.5e-06 56.2 74 48.6
vmacro15946 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 7.2e-06 55.8 32 81.2
vmacro03641 Vaccinium macrocarpon HOM05D007192 ORTHO05D009034 9.4e-06 55.5 102 34.3
vmacro16980 Vaccinium macrocarpon HOM05D000115 ORTHO05D003511 9.4e-06 55.5 48 56.2


User provided reference genes

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