Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16712 Vaccinium macrocarpon HOM05D005518 ORTHO05D001269 3.3e-137 491.9 285 100.0
vmacro16655 Vaccinium macrocarpon HOM05D005518 ORTHO05D001269 2.0e-113 412.9 268 92.9
Rhsim12G0172400 Rhododendron simsii HOM05D005518 ORTHO05D001269 5.8e-89 331.6 265 78.1
Dinv04847 Davidia involucrata HOM05D005518 ORTHO05D001269 2.6e-73 279.6 268 65.3
Actinidia36793 Actinidia chinensis HOM05D005518 ORTHO05D001269 6.9e-66 255.0 269 62.5
Actinidia16187 Actinidia chinensis HOM05D005518 ORTHO05D001269 1.1e-63 247.7 270 60.0
CSS0041106 Camellia sinensis var. sinensis HOM05D005518 ORTHO05D001269 5.6e-60 235.3 268 61.2
Dinv11102 Davidia involucrata HOM05D005518 ORTHO05D001269 3.4e-57 226.1 260 63.8
CSS0031701 Camellia sinensis var. sinensis HOM05D005518 ORTHO05D001269 3.2e-55 219.5 262 58.4
GSVIVG01003640001 Vitis vinifera HOM05D005518 ORTHO05D001269 6.9e-50 201.8 256 56.2
Actinidia25603 Actinidia chinensis HOM05D005518 ORTHO05D001269 9.3e-47 191.4 273 50.5
Thecc.03G124400 Theobroma cacao HOM05D005518 ORTHO05D001269 2.7e-46 189.9 263 52.5
Cpa.g.sc4.97 Carica papaya HOM05D005518 ORTHO05D001269 1.8e-45 187.2 257 49.8
TAR626G1948 Trochodendron aralioides HOM05D005518 ORTHO05D001269 5.7e-44 182.2 275 49.1
Actinidia08857 Actinidia chinensis HOM05D005518 ORTHO05D001269 1.6e-43 180.6 220 56.8
Atru.chr9.1022 Acer truncatum HOM05D005518 ORTHO05D001269 3.7e-43 179.5 251 53.8
Gorai.006G270900 Gossypium raimondii HOM05D005518 ORTHO05D001269 1.4e-42 177.6 235 51.5
Lj5C99T12 Lonicera japonica HOM05D005518 ORTHO05D001269 1.4e-42 177.6 177 61.0
Sabra12G0068800 Salix brachista HOM05D005518 ORTHO05D001269 2.4e-42 176.8 259 49.8
Eucgr.K02750 Eucalyptus grandis HOM05D005518 ORTHO05D001269 3.1e-42 176.4 256 48.8
MD14G1162500 Malus domestica HOM05D005518 ORTHO05D001269 3.1e-42 176.4 255 48.6
Gohir.D09G246400 Gossypium hirsutum HOM05D005518 ORTHO05D001269 6.9e-42 175.3 235 51.5
Gohir.A11G035500 Gossypium hirsutum HOM05D005518 ORTHO05D001269 9.0e-42 174.9 233 50.6
QL10p004779 Quercus lobata HOM05D005518 ORTHO05D001269 3.4e-41 172.9 259 47.9
Gorai.007G042000 Gossypium raimondii HOM05D005518 ORTHO05D001269 1.0e-40 171.4 234 50.9
Prupe.5G155700 Prunus persica HOM05D005518 ORTHO05D001269 1.0e-40 171.4 258 46.9
Gohir.D11G039100 Gossypium hirsutum HOM05D005518 ORTHO05D001269 3.8e-40 169.5 234 50.4
CANSAT80G2082 Cannabis sativa HOM05D005518 ORTHO05D001269 6.5e-40 168.7 258 48.4
Gohir.A09G245800 Gossypium hirsutum HOM05D005518 ORTHO05D001269 1.1e-39 167.9 261 47.9
MSTRG.22916 Avicennia marina HOM05D005518 ORTHO05D001269 2.5e-39 166.8 260 47.7
MSTRG.9316 Avicennia marina HOM05D005518 ORTHO05D001269 4.2e-39 166.0 270 48.1
FAN13G1318 Fragaria x ananassa HOM05D005518 ORTHO05D001269 4.2e-39 166.0 266 45.5
Potri.012G094200 Populus trichocarpa HOM05D005518 ORTHO05D001269 7.2e-39 165.2 254 50.0
Duzib205G1346 Durio zibethinus HOM05D005518 ORTHO05D001269 2.1e-38 163.7 256 49.2
Migut.D01234 Erythranthe guttata HOM05D005518 ORTHO05D001269 2.7e-38 163.3 274 46.7
FAN04G1413 Fragaria x ananassa HOM05D005518 ORTHO05D001269 3.6e-38 162.9 258 46.1
Haze_07258 Corylus avellana HOM05D005518 ORTHO05D001269 4.6e-38 162.5 260 48.5
RcHm_v2.0_Chr1g0380401 Rosa chinensis HOM05D005518 ORTHO05D001269 4.6e-38 162.5 286 45.5
COL.COLO4_16831 Corchorus olitorius HOM05D005518 ORTHO05D001269 7.9e-38 161.8 259 45.6
Sabra15G0113400 Salix brachista HOM05D005518 ORTHO05D001269 7.9e-38 161.8 277 47.3
CiPaw.12G036400 Carya illinoinensis HOM05D005518 ORTHO05D001269 5.1e-37 159.1 259 46.7
FAN25G1054 Fragaria x ananassa HOM05D005518 ORTHO05D001269 5.1e-37 159.1 257 46.7
RcHm_v2.0_Chr7g0190821 Rosa chinensis HOM05D005518 ORTHO05D001269 6.7e-37 158.7 284 45.1
FAN18G1514 Fragaria x ananassa HOM05D000557 ORTHO05D001269 1.1e-36 157.9 258 46.5
FAN08G0706 Fragaria x ananassa HOM05D005518 ORTHO05D001269 2.0e-36 157.1 255 49.0
CiPaw.11G011000 Carya illinoinensis HOM05D005518 ORTHO05D001269 4.3e-36 156.0 257 47.1
FvH4_5g07650 Fragaria vesca HOM05D005518 ORTHO05D001269 4.3e-36 156.0 258 46.5
Nitab4.5_0005327g0060 Nicotiana tabacum HOM05D005518 ORTHO05D001269 7.4e-36 155.2 185 55.1
Nn1g07622 Nelumbo nucifera HOM05D005518 ORTHO05D001269 2.8e-35 153.3 261 47.5
TWI14G0969 Tripterygium wilfordii HOM05D005518 ORTHO05D001269 3.7e-35 152.9 265 47.9
PGR044G0025 Punica granatum HOM05D005518 ORTHO05D001269 6.3e-35 152.1 189 50.3
Sopen03g030200 Solanum pennellii HOM05D005518 ORTHO05D001269 1.4e-34 151.0 269 48.3
Aqoxy4G02270 Aquilegia oxysepala HOM05D005518 ORTHO05D001269 2.4e-34 150.2 177 51.4
SGA_v2.0_scaffold37G14614 Striga asiatica HOM05D005518 ORTHO05D001269 2.4e-34 150.2 260 47.3
Potri.015G091500 Populus trichocarpa HOM05D005518 ORTHO05D001269 3.1e-34 149.8 256 46.1
PGSC0003DMG400015252 Solanum tuberosum HOM05D005518 ORTHO05D001269 4.1e-34 149.4 264 48.5
HanXRQChr02g0035181 Helianthus annuus HOM05D005518 ORTHO05D001269 5.3e-34 149.1 278 41.4
Manes.06G116500 Manihot esculenta HOM05D005518 ORTHO05D001269 9.1e-34 148.3 254 42.1
Solyc03g111030.3 Solanum lycopersicum HOM05D005518 ORTHO05D001269 1.2e-33 147.9 269 51.7
CAN.G352.49 Capsicum annuum HOM05D005518 ORTHO05D001269 2.0e-33 147.1 201 52.2
Ciclev10019441m.g Citrus clementina HOM05D005518 ORTHO05D001269 1.7e-32 144.1 260 45.4
Duzib084G0018 Durio zibethinus HOM05D005518 ORTHO05D001269 3.8e-32 142.9 169 52.1
Lj9A476T55 Lonicera japonica HOM05D005518 ORTHO05D001269 3.8e-32 142.9 258 45.3
Oeu055998.1 Olea europaea HOM05D005518 ORTHO05D001269 3.8e-32 142.9 266 44.7
Nitab4.5_0001664g0120 Nicotiana tabacum HOM05D005518 ORTHO05D001269 8.5e-32 141.7 269 47.6
ECA247G0960 Erigeron canadensis HOM05D005518 ORTHO05D001269 1.4e-31 141.0 297 44.4
ATR0751G048 Amborella trichopoda HOM05D005518 ORTHO05D001269 4.2e-31 139.4 189 48.7
HanXRQChr04g0100301 Helianthus annuus HOM05D005518 ORTHO05D001269 1.2e-30 137.9 316 41.1
ClCG03G003580 Citrullus lanatus HOM05D005518 ORTHO05D001269 2.3e-29 133.7 262 42.7
Duzib068G1391 Durio zibethinus HOM05D005518 ORTHO05D001269 1.5e-28 131.0 201 49.8
CsaV3_1G009430 Cucumis sativus L. HOM05D005518 ORTHO05D001269 6.3e-27 125.6 257 41.6
Sed0015656 Sechium edule HOM05D005518 ORTHO05D001269 6.3e-27 125.6 262 41.2
MBI14_g12740_MAGBIO Magnolia biondii HOM05D005518 ORTHO05D001269 8.2e-27 125.2 291 45.4
DCAR_007472 Daucus carota HOM05D005518 ORTHO05D001269 2.4e-26 123.6 261 38.3
Lsat_1_v5_gn_1_29580 Lactuca sativa HOM05D005518 ORTHO05D001269 3.1e-26 123.2 291 40.9
Glyma.06G172500 Glycine max HOM05D005518 ORTHO05D001269 4.1e-26 122.9 257 44.4
PSO782G5170 Papaver somniferum HOM05D005518 ORTHO05D001269 5.3e-26 122.5 267 44.2
Sed0017473 Sechium edule HOM05D005518 ORTHO05D001269 7.0e-26 122.1 253 42.3
MELO3C002344.2 Cucumis melo HOM05D005518 ORTHO05D001269 2.6e-25 120.2 256 46.5
Cc04_g10180 Coffea canephora HOM05D005518 ORTHO05D001269 6.7e-21 105.5 276 43.1
Lalb_Chr11g0069691 Lupinus albus HOM05D005518 ORTHO05D001269 1.5e-20 104.4 261 42.9
Peaxi162Scf00089g00324 Petunia axillaris HOM05D005518 ORTHO05D001269 1.5e-20 104.4 287 36.9
CDE06G2288 Ceratophyllum demersum HOM05D005518 ORTHO05D005913 2.0e-20 104.0 247 39.3
Medtr3g075070 Medicago truncatula HOM05D005518 ORTHO05D001269 2.6e-20 103.6 244 42.2
Lj1g0006481 Lotus japonicus HOM05D005518 ORTHO05D001269 5.7e-20 102.4 260 44.2
Glyma.04G193600 Glycine max HOM05D005518 ORTHO05D001269 7.4e-20 102.1 246 40.2
SalBow1G4741 Salvia bowleyana HOM05D005518 ORTHO05D001269 1.7e-19 100.9 157 45.9
PSO063G3591 Papaver somniferum HOM05D005518 ORTHO05D001269 2.2e-19 100.5 107 53.3
TWI23G0187 Tripterygium wilfordii HOM05D005518 ORTHO05D001269 2.2e-19 100.5 282 37.2
Manes.14G054500 Manihot esculenta HOM05D005518 ORTHO05D001269 1.4e-18 97.8 253 37.9
TPR.G26139 Trifolium pratense HOM05D005518 ORTHO05D001269 1.8e-18 97.4 189 47.1
Lalb_Chr08g0237001 Lupinus albus HOM05D005518 ORTHO05D001269 2.6e-17 93.6 275 39.3
Zm00001eb388520 Zea mays HOM05D005518 ORTHO05D001269 1.3e-16 91.3 245 33.9
THA.LOC104803143 Tarenaya hassleriana HOM05D005518 ORTHO05D001269 2.9e-16 90.1 108 50.0
Aa31LG3G5820 Aethionema arabicum HOM05D005518 ORTHO05D001269 1.1e-15 88.2 119 45.4
Oeu006376.1 Olea europaea HOM05D005518 ORTHO05D001269 1.5e-15 87.8 106 51.9
Psat5g139920 Pisum sativum HOM05D005518 ORTHO05D001269 1.9e-15 87.4 242 36.8
AUR62029840 Chenopodium quinoa HOM05D005518 ORTHO05D001269 6.1e-14 82.4 268 33.6
THA.LOC104825006 Tarenaya hassleriana HOM05D005518 ORTHO05D001269 8.0e-14 82.0 205 39.5
AUR62025869 Chenopodium quinoa HOM05D005518 ORTHO05D001269 1.0e-13 81.6 258 33.7
Sc22g0004150 Simmondsia chinensis HOM05D005518 ORTHO05D001269 1.8e-13 80.9 155 40.0
HPP92_027039 Vanilla planifolia HOM05D005518 ORTHO05D001269 2.3e-13 80.5 275 34.9
Phvul.009G168300 Phaseolus vulgaris HOM05D005518 ORTHO05D001269 5.7e-12 75.9 257 38.1
Os06g0609800 Oryza sativa ssp. japonica HOM05D005518 ORTHO05D001269 7.5e-12 75.5 246 33.7
CARHR258130 Cardamine hirsuta HOM05D005518 ORTHO05D001269 9.7e-12 75.1 274 40.1
AL8G24460 Arabidopsis lyrata HOM05D005518 ORTHO05D001269 1.3e-11 74.7 307 31.6
MD06G1148700 Malus domestica HOM05D005518 ORTHO05D001269 6.3e-11 72.4 175 38.3
AT5G50350 Arabidopsis thaliana HOM05D005518 ORTHO05D001269 1.1e-10 71.6 308 34.1
SEGI_40207 Sequoiadendron giganteum HOM05D005518 ORTHO05D001269 2.4e-10 70.5 268 30.2
A03p27800 Brassica napus HOM05D005518 ORTHO05D001269 3.1e-10 70.1 189 33.9
arahy.Tifrunner.gnm1.ann1.P5I184 Arachis hypogaea HOM05D001134 ORTHO05D001269 2.0e-09 67.4 205 38.0
Hund02416 Selenicereus undatus HOM05D005518 ORTHO05D001269 3.5e-09 66.6 185 35.1
Carub.0008s1043 Capsella rubella HOM05D005518 ORTHO05D001269 4.5e-09 66.2 173 30.1
Sc04g0000850 Simmondsia chinensis HOM05D005518 ORTHO05D001269 5.9e-09 65.9 200 38.0
EL10As4g23466 Beta vulgaris HOM05D005518 ORTHO05D001269 1.3e-08 64.7 256 31.6
arahy.Tifrunner.gnm1.ann1.QFFJ7D Arachis hypogaea HOM05D005518 ORTHO05D001269 1.7e-08 64.3 255 33.7
BcaB01g02898 Brassica carinata HOM05D004180 ORTHO05D001269 8.5e-08 62.0 292 35.3
BraA03t11991Z Brassica rapa HOM05D005518 ORTHO05D001269 8.5e-08 62.0 175 33.1
CDE03G0480 Ceratophyllum demersum HOM05D005518 ORTHO05D001269 8.5e-08 62.0 247 32.4
C03p33530 Brassica napus HOM05D005518 ORTHO05D001269 3.2e-07 60.1 175 32.6
BolC3t15674H Brassica oleracea HOM05D005518 ORTHO05D001269 3.2e-07 60.1 175 32.6
BcaC01g04812 Brassica carinata HOM05D005518 ORTHO05D001269 4.2e-07 59.7 175 32.6
unitig_22.g5764 Utricularia gibba HOM05D005518 ORTHO05D001269 5.5e-07 59.3 85 50.6
Cfa010442 Carpinus fangiana HOM05D007286 ORTHO05D008955 4.7e-06 56.2 193 32.1
Thhalv10013029m.g Eutrema salsugineum HOM05D005518 ORTHO05D001269 8.0e-06 55.5 282 35.1


User provided reference genes

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