Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16674 Vaccinium macrocarpon HOM05D004830 ORTHO05D005310 1.7e-114 416.0 204 100.0
Rhsim12G0174200 Rhododendron simsii HOM05D004830 ORTHO05D005310 6.4e-66 254.6 167 76.6
Actinidia08868 Actinidia chinensis HOM05D004830 ORTHO05D005310 1.1e-60 237.3 167 73.7
CSS0034026 Camellia sinensis var. sinensis HOM05D004830 ORTHO05D005310 4.5e-59 231.9 166 71.1
Manes.14G051600 Manihot esculenta HOM05D004830 ORTHO05D005310 2.4e-57 226.1 168 66.7
GSVIVG01008536001 Vitis vinifera HOM05D004830 ORTHO05D005310 7.1e-57 224.6 197 60.4
Atru.chr9.1044 Acer truncatum HOM05D004830 ORTHO05D005310 1.2e-56 223.8 198 60.1
Cfa018828 Carpinus fangiana HOM05D004830 ORTHO05D005310 3.5e-56 222.2 167 67.1
Duzib084G0035 Durio zibethinus HOM05D004830 ORTHO05D005310 7.9e-56 221.1 167 67.7
QL10p003269 Quercus lobata HOM05D004830 ORTHO05D005310 1.0e-55 220.7 167 67.1
Migut.I00505 Erythranthe guttata HOM05D004830 ORTHO05D005310 1.3e-55 220.3 172 62.8
Oeu056012.1 Olea europaea HOM05D004830 ORTHO05D005310 3.9e-55 218.8 165 66.1
MSTRG.11282 Avicennia marina HOM05D004830 ORTHO05D005310 6.7e-55 218.0 196 60.7
CiPaw.11G008200 Carya illinoinensis HOM05D004830 ORTHO05D005310 6.7e-55 218.0 182 62.1
Thecc.03G128400 Theobroma cacao HOM05D004830 ORTHO05D005310 6.7e-55 218.0 167 65.9
TAR622G0015 Trochodendron aralioides HOM05D004830 ORTHO05D005310 8.7e-55 217.6 178 64.6
COL.COLO4_28101 Corchorus olitorius HOM05D004830 ORTHO05D005310 1.5e-54 216.9 167 64.7
Cpa.g.sc13.124 Carica papaya HOM05D004830 ORTHO05D005310 2.5e-54 216.1 172 64.0
Lj5A97T92 Lonicera japonica HOM05D004830 ORTHO05D005310 3.7e-53 212.2 167 64.7
QL10p003210 Quercus lobata HOM05D004830 ORTHO05D005310 3.1e-52 209.1 167 64.1
Ciclev10022323m.g Citrus clementina HOM05D004830 ORTHO05D005310 4.0e-52 208.8 168 61.9
Potri.012G097200 Populus trichocarpa HOM05D004830 ORTHO05D005310 9.0e-52 207.6 168 63.1
QL10p003237 Quercus lobata HOM05D004830 ORTHO05D005310 1.5e-51 206.8 167 63.5
Gohir.A03G052400 Gossypium hirsutum HOM05D004830 ORTHO05D005310 3.4e-51 205.7 167 65.3
Prupe.5G151800 Prunus persica HOM05D004830 ORTHO05D005310 1.0e-50 204.1 167 61.1
Gorai.003G121000 Gossypium raimondii HOM05D004830 ORTHO05D005310 1.7e-50 203.4 167 65.3
Glyma.06G170600 Glycine max HOM05D004830 ORTHO05D005310 2.2e-50 203.0 179 58.7
Lj1g0026153 Lotus japonicus HOM05D004830 ORTHO05D005310 2.9e-50 202.6 173 59.5
MBI13_g01839_MAGBIO Magnolia biondii HOM05D004830 ORTHO05D005310 2.9e-50 202.6 116 82.8
VMungo1309G0155 Vigna mungo HOM05D004830 ORTHO05D005310 2.9e-50 202.6 173 60.7
RcHm_v2.0_Chr7g0190301 Rosa chinensis HOM05D004830 ORTHO05D005310 4.9e-50 201.8 167 60.5
Aqoxy5G03391 Aquilegia oxysepala HOM05D004830 ORTHO05D005310 6.5e-50 201.4 194 55.7
Aqoxy7G00964 Aquilegia oxysepala HOM05D004830 ORTHO05D005310 6.5e-50 201.4 167 60.5
Lsat_1_v5_gn_4_80120 Lactuca sativa HOM05D004830 ORTHO05D005310 1.9e-49 199.9 159 62.3
ATR0561G210 Amborella trichopoda HOM05D004830 ORTHO05D005310 3.2e-49 199.1 168 61.9
Glyma.04G195400 Glycine max HOM05D004830 ORTHO05D005310 4.2e-49 198.7 172 58.7
HanXRQChr09g0273121 Helianthus annuus HOM05D004830 ORTHO05D005310 4.2e-49 198.7 159 61.0
MD06G1142500 Malus domestica HOM05D004830 ORTHO05D005310 4.2e-49 198.7 167 61.1
Phvul.009G166700 Phaseolus vulgaris HOM05D004830 ORTHO05D005310 4.2e-49 198.7 173 59.5
Ca_24504_v3 Cicer arietinum L. HOM05D004830 ORTHO05D005310 5.5e-49 198.4 172 59.9
Lalb_Chr11g0069591 Lupinus albus HOM05D004830 ORTHO05D005310 1.6e-48 196.8 172 58.1
Medtr3g089170 Medicago truncatula HOM05D004830 ORTHO05D005310 1.6e-48 196.8 172 59.9
arahy.Tifrunner.gnm1.ann1.CC2DBD Arachis hypogaea HOM05D004830 ORTHO05D005310 2.1e-48 196.4 172 57.0
Eucgr.K02732 Eucalyptus grandis HOM05D004830 ORTHO05D005310 2.1e-48 196.4 166 61.4
arahy.Tifrunner.gnm1.ann1.228PAQ Arachis hypogaea HOM05D004830 ORTHO05D005310 2.3e-47 193.0 172 57.0
Nitab4.5_0002855g0030 Nicotiana tabacum HOM05D004830 ORTHO05D005310 8.7e-47 191.0 167 60.5
Nitab4.5_0002062g0020 Nicotiana tabacum HOM05D004830 ORTHO05D005310 2.5e-46 189.5 167 59.9
Cc00_g11930 Coffea canephora HOM05D004830 ORTHO05D005310 5.7e-46 188.3 159 59.7
Peaxi162Scf00536g00113 Petunia axillaris HOM05D004830 ORTHO05D005310 5.7e-46 188.3 162 61.7
FAN18G1516 Fragaria x ananassa HOM05D004830 ORTHO05D005310 7.4e-46 188.0 167 57.5
CDE02G3469 Ceratophyllum demersum HOM05D004830 ORTHO05D005310 1.6e-45 186.8 183 54.6
ATR0332G003 Amborella trichopoda HOM05D004830 ORTHO05D005310 2.1e-45 186.4 168 59.5
FAN13G1978 Fragaria x ananassa HOM05D004830 ORTHO05D005310 2.8e-45 186.0 167 58.7
PGR044G2645 Punica granatum HOM05D004830 ORTHO05D005310 6.3e-45 184.9 164 57.3
FvH4_5g08220 Fragaria vesca HOM05D004830 ORTHO05D005310 1.2e-43 180.6 167 56.3
unitig_8.g3032 Utricularia gibba HOM05D004830 ORTHO05D005310 1.2e-43 180.6 159 56.6
Os08g0530500 Oryza sativa ssp. japonica HOM05D004830 ORTHO05D005310 1.5e-43 180.3 165 58.2
ECA232G3637 Erigeron canadensis HOM05D004830 ORTHO05D005310 2.0e-43 179.9 127 65.4
FAN08G1417 Fragaria x ananassa HOM05D004830 ORTHO05D005310 2.6e-43 179.5 167 55.1
MBI11_g07465_MAGBIO Magnolia biondii HOM05D004830 ORTHO05D005310 4.5e-43 178.7 150 62.7
PSO063G3292 Papaver somniferum HOM05D004830 ORTHO05D005310 3.8e-42 175.6 167 55.7
PSO782G4089 Papaver somniferum HOM05D004830 ORTHO05D005310 3.2e-41 172.6 167 54.5
Haze_07222 Corylus avellana HOM05D004830 ORTHO05D005310 2.7e-40 169.5 163 54.6
SEGI_37187 Sequoiadendron giganteum HOM05D004830 ORTHO05D005310 3.0e-31 139.4 118 54.2
Nn3g16476 Nelumbo nucifera HOM05D004830 ORTHO05D005310 2.7e-24 116.3 150 46.0
TAR633G1142 Trochodendron aralioides HOM05D004830 ORTHO05D005310 2.7e-24 116.3 131 45.8
Dinv23140 Davidia involucrata HOM05D004830 ORTHO05D005310 3.6e-24 115.9 98 63.3
ATR0307G071 Amborella trichopoda HOM05D004830 ORTHO05D005310 1.0e-23 114.4 125 44.8
Nn7g37285 Nelumbo nucifera HOM05D004830 ORTHO05D005310 3.0e-23 112.8 167 35.3
GSVIVG01029897001 Vitis vinifera HOM05D004830 ORTHO05D005310 9.7e-22 107.8 115 43.5
Duzib106G0998 Durio zibethinus HOM05D004830 ORTHO05D005310 3.1e-20 102.8 114 43.0
COL.COLO4_33470 Corchorus olitorius HOM05D004830 ORTHO05D005310 4.1e-20 102.4 114 42.1
Thecc.05G236700 Theobroma cacao HOM05D004830 ORTHO05D005310 4.1e-20 102.4 114 43.0
arahy.Tifrunner.gnm1.ann1.TSAG7F Arachis hypogaea HOM05D004830 ORTHO05D005310 7.0e-20 101.7 123 42.3
Gohir.A11G224212 Gossypium hirsutum HOM05D004830 ORTHO05D005310 9.1e-20 101.3 119 41.2
PSO591G0293 Papaver somniferum HOM05D004830 ORTHO05D005310 9.1e-20 101.3 111 45.9
TWI34G0970 Tripterygium wilfordii HOM05D004830 ORTHO05D005310 9.1e-20 101.3 114 41.2
MBI19_g09302_MAGBIO Magnolia biondii HOM05D004830 ORTHO05D005310 1.6e-19 100.5 102 42.2
MBI19_g15087_MAGBIO Magnolia biondii HOM05D004830 ORTHO05D005310 1.6e-19 100.5 102 42.2
Manes.08G155600 Manihot esculenta HOM05D004830 ORTHO05D005310 1.6e-19 100.5 114 41.2
Aqoxy2G00040 Aquilegia oxysepala HOM05D004830 ORTHO05D005310 2.0e-19 100.1 117 42.7
Cpa.g.sc73.42 Carica papaya HOM05D004830 ORTHO05D005310 4.5e-19 99.0 114 40.4
Dinv14555 Davidia involucrata HOM05D004830 ORTHO05D005310 4.5e-19 99.0 114 41.2
Gohir.D11G237500 Gossypium hirsutum HOM05D004830 ORTHO05D005310 4.5e-19 99.0 113 41.6
Gorai.007G250900 Gossypium raimondii HOM05D004830 ORTHO05D005310 4.5e-19 99.0 113 41.6
PSO832G0423 Papaver somniferum HOM05D004830 ORTHO05D005310 7.7e-19 98.2 111 44.1
Atru.chr2.1607 Acer truncatum HOM05D004830 ORTHO05D005310 1.3e-18 97.4 112 41.1
RcHm_v2.0_Chr3g0495501 Rosa chinensis HOM05D004830 ORTHO05D005310 1.3e-18 97.4 117 40.2
CiPaw.09G053100 Carya illinoinensis HOM05D004830 ORTHO05D005310 3.8e-18 95.9 98 45.9
Migut.J01591 Erythranthe guttata HOM05D004830 ORTHO05D005310 3.8e-18 95.9 114 39.5
Gohir.D06G037550 Gossypium hirsutum HOM05D004830 ORTHO05D005310 3.8e-18 95.9 102 54.9
Haze_20367 Corylus avellana HOM05D004830 ORTHO05D005310 5.0e-18 95.5 100 43.0
MSTRG.6264 Avicennia marina HOM05D004830 ORTHO05D005310 1.5e-17 94.0 108 42.6
Ciclev10032343m.g Citrus clementina HOM05D004830 ORTHO05D005310 1.9e-17 93.6 112 40.2
Lalb_Chr22g0358351 Lupinus albus HOM05D004830 ORTHO05D005310 2.5e-17 93.2 156 35.3
Sabra13G0059800 Salix brachista HOM05D004830 ORTHO05D005310 3.2e-17 92.8 96 43.8
Psat3g084280 Pisum sativum HOM05D004830 ORTHO05D005310 5.5e-17 92.0 117 40.2
QL07p015956 Quercus lobata HOM05D004830 ORTHO05D005310 5.5e-17 92.0 114 37.7
TPR.G26134 Trifolium pratense HOM05D004830 ORTHO05D005310 5.5e-17 92.0 60 68.3
Prupe.1G058500 Prunus persica HOM05D004830 ORTHO05D005310 7.2e-17 91.7 169 32.0
FAN28G2201 Fragaria x ananassa HOM05D004830 ORTHO05D005310 1.2e-16 90.9 117 38.5
Potri.013G068900 Populus trichocarpa HOM05D004830 ORTHO05D005310 1.6e-16 90.5 96 42.7
FAN26G1469 Fragaria x ananassa HOM05D004830 ORTHO05D005310 4.7e-16 89.0 117 38.5
FvH4_1g29410 Fragaria vesca HOM05D004830 ORTHO05D005310 6.1e-16 88.6 117 38.5
FAN19G2808 Fragaria x ananassa HOM05D004830 ORTHO05D005310 6.1e-16 88.6 117 38.5
PGR042G2697 Punica granatum HOM05D004830 ORTHO05D005310 3.0e-15 86.3 114 37.7
Zm00001eb036570 Zea mays HOM05D004830 ORTHO05D005310 4.0e-15 85.9 207 32.4
Glyma.19G121200 Glycine max HOM05D004830 ORTHO05D005310 6.7e-15 85.1 100 40.0
Lj1g0023159 Lotus japonicus HOM05D004830 ORTHO05D005310 1.2e-14 84.3 99 42.4
TPR.G23653 Trifolium pratense HOM05D004830 ORTHO05D005310 1.2e-14 84.3 157 33.8
Prupe.7G025800 Prunus persica HOM05D004830 ORTHO05D005310 1.5e-14 84.0 118 36.4
TPR.G26160 Trifolium pratense HOM05D004830 ORTHO05D005310 1.5e-14 84.0 117 43.6
MD14G1012800 Malus domestica HOM05D004830 ORTHO05D005310 5.7e-14 82.0 102 39.2
RhsimUnG0023100 Rhododendron simsii HOM05D004830 ORTHO05D005310 9.7e-14 81.3 139 33.1
Gohir.D08G162001 Gossypium hirsutum HOM05D004830 ORTHO05D005310 1.3e-13 80.9 52 71.2
Ca_03431_v3 Cicer arietinum L. HOM05D004830 ORTHO05D005310 2.8e-13 79.7 113 36.3
Eucgr.A02163 Eucalyptus grandis HOM05D004830 ORTHO05D005310 4.1e-12 75.9 97 36.1
Gohir.D03G114700 Gossypium hirsutum HOM05D004830 ORTHO05D005310 1.2e-11 74.3 91 51.6
VMungo1383G2348 Vigna mungo HOM05D004830 ORTHO05D005310 1.6e-11 73.9 103 39.8
Phvul.001G101700 Phaseolus vulgaris HOM05D004830 ORTHO05D005310 2.0e-11 73.6 102 40.2
Medtr7g087480 Medicago truncatula HOM05D004830 ORTHO05D005310 3.8e-10 69.3 99 37.4
AagrBONN_evm.TU.Sc2ySwM_344.609 Anthoceros agrestis HOM05D004830 ORTHO05D005310 4.2e-09 65.9 112 33.9
Cfa019887 Carpinus fangiana HOM05D004830 ORTHO05D005310 5.7e-06 55.5 100 30.0


User provided reference genes

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