Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16648 Vaccinium macrocarpon HOM05D002294 ORTHO05D002367 2.2e-94 349.0 180 100.0
CSS0020221 Camellia sinensis var. sinensis HOM05D002294 ORTHO05D002367 5.3e-40 168.3 170 58.2
Dinv33811 Davidia involucrata HOM05D002294 ORTHO05D002367 2.2e-33 146.4 171 51.5
Dinv11485 Davidia involucrata HOM05D002294 ORTHO05D002367 4.1e-32 142.1 171 50.9
Rhsim12G0168300 Rhododendron simsii HOM05D002294 ORTHO05D002367 7.0e-16 88.2 84 60.7
CANSAT64G2646 Cannabis sativa HOM05D002294 ORTHO05D002367 1.6e-15 87.0 121 44.6
MD14G1170700 Malus domestica HOM05D002294 ORTHO05D002367 2.7e-15 86.3 173 37.0
Prupe.5G164800 Prunus persica HOM05D002294 ORTHO05D002367 4.6e-15 85.5 172 37.8
Rhsim01G0251600 Rhododendron simsii HOM05D002294 ORTHO05D002367 5.9e-15 85.1 83 61.4
Cfa015569 Carpinus fangiana HOM05D002294 ORTHO05D002367 1.3e-14 84.0 178 37.1
TAR374G1207 Trochodendron aralioides HOM05D002294 ORTHO05D002367 6.6e-14 81.6 103 47.6
Atru.chr9.2591 Acer truncatum HOM05D002294 ORTHO05D002367 1.9e-13 80.1 170 35.3
QL03p071250 Quercus lobata HOM05D002294 ORTHO05D002367 2.8e-12 76.3 210 32.4
Haze_17593 Corylus avellana HOM05D002294 ORTHO05D002367 6.2e-12 75.1 74 51.4
Hma1.2p1_0221F.1_g093080 Hydrangea macrophylla HOM05D002294 ORTHO05D002367 8.0e-12 74.7 84 53.6
Haze_11976 Corylus avellana HOM05D002294 ORTHO05D002367 1.4e-11 73.9 74 50.0
Aqoxy7G03961 Aquilegia oxysepala HOM05D002294 ORTHO05D002367 5.2e-11 72.0 98 48.0
Cpa.g.sc59.127 Carica papaya HOM05D002294 ORTHO05D002367 5.2e-11 72.0 175 32.0
Haze_11924 Corylus avellana HOM05D002294 ORTHO05D002367 8.9e-11 71.2 78 48.7
Cfa008892 Carpinus fangiana HOM05D000235 ORTHO05D000147 2.0e-10 70.1 170 36.5
Ciclev10022242m.g Citrus clementina HOM05D002294 ORTHO05D002367 9.8e-10 67.8 170 32.4
CSS0000839 Camellia sinensis var. sinensis HOM05D002294 ORTHO05D002367 1.3e-09 67.4 50 74.0
RcHm_v2.0_Chr7g0192431 Rosa chinensis HOM05D002294 ORTHO05D002367 3.7e-09 65.9 170 34.1
CiPaw.06G091400 Carya illinoinensis HOM05D002294 ORTHO05D002367 6.4e-09 65.1 170 33.5
Ca_03374_v3 Cicer arietinum L. HOM05D002294 ORTHO05D002367 1.9e-08 63.5 46 69.6
HanXRQChr16g0504741 Helianthus annuus HOM05D002294 ORTHO05D002367 1.9e-08 63.5 91 45.1
FAN04G2356 Fragaria x ananassa HOM05D002294 ORTHO05D002367 2.4e-08 63.2 170 32.9
GSVIVG01007636001 Vitis vinifera HOM05D002294 ORTHO05D002367 2.4e-08 63.2 99 40.4
Lalb_Chr25g0286841 Lupinus albus HOM05D002294 ORTHO05D002367 7.0e-08 61.6 105 40.0
QL10p006794 Quercus lobata HOM05D002294 ORTHO05D002367 7.0e-08 61.6 70 50.0
FAN13G0475 Fragaria x ananassa HOM05D002294 ORTHO05D002367 9.2e-08 61.2 171 33.3
MD06G1165200 Malus domestica HOM05D002294 ORTHO05D002367 1.6e-07 60.5 73 45.2
FAN08G2480 Fragaria x ananassa HOM05D002294 ORTHO05D002367 2.0e-07 60.1 170 31.8
COL.COLO4_32207 Corchorus olitorius HOM05D002294 ORTHO05D002367 2.7e-07 59.7 92 44.6
RcHm_v2.0_Chr7g0192461 Rosa chinensis HOM05D002294 ORTHO05D002367 3.5e-07 59.3 67 44.8
FAN18G1540 Fragaria x ananassa HOM05D002294 ORTHO05D002367 4.6e-07 58.9 170 32.4
Glyma.08G265900 Glycine max HOM05D002294 ORTHO05D002367 4.6e-07 58.9 85 44.7
FvH4_5g06380 Fragaria vesca HOM05D002294 ORTHO05D002367 6.0e-07 58.5 170 32.4
Sc13g0003620 Simmondsia chinensis HOM05D002294 ORTHO05D002367 7.8e-07 58.2 80 42.5
TWI23G0110 Tripterygium wilfordii HOM05D002294 ORTHO05D002367 7.8e-07 58.2 172 30.8
Gohir.D12G188228 Gossypium hirsutum HOM05D002294 ORTHO05D002367 1.0e-06 57.8 57 56.1
AUR62028643 Chenopodium quinoa HOM05D002294 ORTHO05D002367 1.7e-06 57.0 67 46.3
ECA248G3964 Erigeron canadensis HOM05D002294 ORTHO05D002367 2.3e-06 56.6 70 48.6
Potri.012G086800 Populus trichocarpa HOM05D002294 ORTHO05D002367 2.3e-06 56.6 42 61.9
Ca_20195_v3 Cicer arietinum L. HOM05D002294 ORTHO05D002367 3.0e-06 56.2 52 57.7
Glyma.18G078700 Glycine max HOM05D002294 ORTHO05D002367 3.0e-06 56.2 92 42.4
Lj1A261T33 Lonicera japonica HOM05D002294 ORTHO05D002367 3.0e-06 56.2 151 30.5
Psat7g123320 Pisum sativum HOM05D002294 ORTHO05D002367 3.0e-06 56.2 57 54.4
Thhalv10014577m.g Eutrema salsugineum HOM05D002294 ORTHO05D002367 3.9e-06 55.8 46 63.0
Thecc.03G115800 Theobroma cacao HOM05D002294 ORTHO05D002367 3.9e-06 55.8 57 54.4
Sabra12G0062200 Salix brachista HOM05D002294 ORTHO05D002367 5.0e-06 55.5 42 61.9
Duzib205G0024 Durio zibethinus HOM05D002294 ORTHO05D002367 8.6e-06 54.7 57 57.9
Sed0005556 Sechium edule HOM05D002294 ORTHO05D002367 8.6e-06 54.7 97 40.2


User provided reference genes

Program Settings