Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16601 Vaccinium macrocarpon HOM05D000086 ORTHO05D001065 4.8e-79 297.7 149 100.0
Rhsim12G0163700 Rhododendron simsii HOM05D000086 ORTHO05D001065 1.1e-30 137.1 92 76.1
vmacro16600 Vaccinium macrocarpon HOM05D000086 ORTHO05D001065 1.7e-23 113.2 92 63.0
Rhsim12G0163600 Rhododendron simsii HOM05D000157 ORTHO05D001065 1.3e-18 97.1 93 59.1
CSS0041492 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D001065 4.8e-18 95.1 95 56.8
Rhsim12G0163500 Rhododendron simsii HOM05D000086 ORTHO05D001065 9.0e-17 90.9 88 55.7
MBI14_g46933_MAGBIO Magnolia biondii HOM05D000086 ORTHO05D001065 2.9e-15 85.9 102 44.1
Peaxi162Scf00017g00282 Petunia axillaris HOM05D000086 ORTHO05D001065 4.9e-15 85.1 93 51.6
Oeu022166.1 Olea europaea HOM05D000086 ORTHO05D001065 3.2e-14 82.4 87 52.9
Cfa019098 Carpinus fangiana HOM05D000086 ORTHO05D001065 1.6e-13 80.1 94 45.7
Nn4g22815 Nelumbo nucifera HOM05D002398 ORTHO05D001065 2.1e-13 79.7 91 54.9
TAR622G0426 Trochodendron aralioides HOM05D000086 ORTHO05D001065 2.1e-13 79.7 98 44.9
TAR622G0760 Trochodendron aralioides HOM05D000086 ORTHO05D001065 2.1e-13 79.7 98 44.9
Duzib205G1408 Durio zibethinus HOM05D000086 ORTHO05D001065 2.7e-13 79.3 91 47.3
FAN04G2400 Fragaria x ananassa HOM05D000086 ORTHO05D001065 2.7e-13 79.3 91 46.2
Duzib147G0849 Durio zibethinus HOM05D000086 ORTHO05D001065 3.5e-13 79.0 92 50.0
RcHm_v2.0_Chr7g0193811 Rosa chinensis HOM05D000086 ORTHO05D001065 4.6e-13 78.6 91 46.2
CANSAT54G1929 Cannabis sativa HOM05D000086 ORTHO05D001065 6.0e-13 78.2 97 43.3
FvH4_5g05151 Fragaria vesca HOM05D000086 ORTHO05D001065 6.0e-13 78.2 91 46.2
FAN08G2608 Fragaria x ananassa HOM05D000086 ORTHO05D001065 6.0e-13 78.2 91 46.2
FAN13G0289 Fragaria x ananassa HOM05D000086 ORTHO05D001065 6.0e-13 78.2 91 46.2
FAN18G1744 Fragaria x ananassa HOM05D000086 ORTHO05D001065 6.0e-13 78.2 91 46.2
Solyc03g114190.1 Solanum lycopersicum HOM05D000086 ORTHO05D001065 6.0e-13 78.2 93 46.2
Aqoxy3G00986 Aquilegia oxysepala HOM05D000086 ORTHO05D001065 1.0e-12 77.4 92 45.7
Nitab4.5_0000852g0120 Nicotiana tabacum HOM05D000086 ORTHO05D001065 1.0e-12 77.4 88 48.9
COL.COLO4_34051 Corchorus olitorius HOM05D000086 ORTHO05D001065 1.3e-12 77.0 94 46.8
CSS0012672 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D001065 2.3e-12 76.3 89 47.2
Migut.I00027 Erythranthe guttata HOM05D000086 ORTHO05D001065 3.9e-12 75.5 90 46.7
Sopen02g016820 Solanum pennellii HOM05D000086 ORTHO05D001065 3.9e-12 75.5 88 44.3
Sopen03g033270 Solanum pennellii HOM05D000086 ORTHO05D001065 8.7e-12 74.3 93 45.2
Thecc.03G009900 Theobroma cacao HOM05D000086 ORTHO05D001065 8.7e-12 74.3 95 46.3
Nitab4.5_0001709g0030 Nicotiana tabacum HOM05D000086 ORTHO05D001065 1.1e-11 73.9 88 44.3
Hma1.2p1_0967F.1_g242230 Hydrangea macrophylla HOM05D000086 ORTHO05D001065 1.5e-11 73.6 97 45.4
Eucgr.K02856 Eucalyptus grandis HOM05D000086 ORTHO05D001065 1.9e-11 73.2 92 46.7
Cc04_g12920 Coffea canephora HOM05D000157 ORTHO05D001065 2.5e-11 72.8 101 41.6
COL.COLO4_04777 Corchorus olitorius HOM05D000086 ORTHO05D001065 2.5e-11 72.8 91 46.2
Solyc02g067700.1 Solanum lycopersicum HOM05D000086 ORTHO05D001065 2.5e-11 72.8 88 43.2
ATR0691G277 Amborella trichopoda HOM05D000086 ORTHO05D001065 3.3e-11 72.4 91 47.3
Gohir.D09G025150 Gossypium hirsutum HOM05D002398 ORTHO05D001065 3.3e-11 72.4 99 43.4
Hma1.2p1_0176F.1_g077650 Hydrangea macrophylla HOM05D000086 ORTHO05D001065 3.3e-11 72.4 94 46.8
PSO478G2048 Papaver somniferum HOM05D000086 ORTHO05D001065 3.3e-11 72.4 96 43.8
Hma1.2p1_0802F.1_g220490 Hydrangea macrophylla HOM05D000086 ORTHO05D001065 4.3e-11 72.0 97 45.4
PSO017G0322 Papaver somniferum HOM05D000086 ORTHO05D001065 4.3e-11 72.0 96 43.8
Peaxi162Scf00933g00023 Petunia axillaris HOM05D000086 ORTHO05D001065 4.3e-11 72.0 88 43.2
Prupe.3G282900 Prunus persica HOM05D000086 ORTHO05D001065 4.3e-11 72.0 88 44.3
PGSC0003DMG400006951 Solanum tuberosum HOM05D000086 ORTHO05D001065 4.3e-11 72.0 88 43.2
PGSC0003DMG400024595 Solanum tuberosum HOM05D000086 ORTHO05D001065 4.3e-11 72.0 90 45.6
QL02p076837 Quercus lobata HOM05D000086 ORTHO05D001065 5.6e-11 71.6 94 42.6
Cfa007437 Carpinus fangiana HOM05D000086 ORTHO05D001065 7.4e-11 71.2 102 38.2
Nn3g16909 Nelumbo nucifera HOM05D000086 ORTHO05D001065 7.4e-11 71.2 98 42.9
Nitab4.5_0001125g0010 Nicotiana tabacum HOM05D000086 ORTHO05D001065 9.6e-11 70.9 88 43.2
TPR.G30389 Trifolium pratense HOM05D000086 ORTHO05D001065 1.3e-10 70.5 95 45.3
MD06G1176900 Malus domestica HOM05D000086 ORTHO05D001065 1.6e-10 70.1 92 45.7
MD14G1183100 Malus domestica HOM05D000086 ORTHO05D001065 1.6e-10 70.1 88 43.2
Gohir.A09G025850 Gossypium hirsutum HOM05D000086 ORTHO05D001065 2.1e-10 69.7 95 43.2
CiPaw.03G036900 Carya illinoinensis HOM05D000086 ORTHO05D001065 3.7e-10 68.9 92 46.7
Ciclev10022743m.g Citrus clementina HOM05D000086 ORTHO05D001065 3.7e-10 68.9 92 39.1
Manes.17G122600 Manihot esculenta HOM05D000086 ORTHO05D001065 4.8e-10 68.6 98 41.8
Sed0007300 Sechium edule HOM05D000086 ORTHO05D001065 4.8e-10 68.6 94 41.5
Sc10g0010090 Simmondsia chinensis HOM05D000086 ORTHO05D001065 6.2e-10 68.2 94 42.6
Migut.H00134 Erythranthe guttata HOM05D000086 ORTHO05D001065 8.1e-10 67.8 100 40.0
MD17G1035700 Malus domestica HOM05D000086 ORTHO05D001065 8.1e-10 67.8 108 36.1
Atru.chr9.2447 Acer truncatum HOM05D000086 ORTHO05D001065 1.1e-09 67.4 92 42.4
Duzib068G0244 Durio zibethinus HOM05D000086 ORTHO05D001065 1.1e-09 67.4 89 42.7
Gorai.006G029300 Gossypium raimondii HOM05D000086 ORTHO05D001065 1.1e-09 67.4 95 43.2
MSTRG.24007 Avicennia marina HOM05D000086 ORTHO05D001065 1.8e-09 66.6 99 41.4
Medtr3g078120 Medicago truncatula HOM05D000086 ORTHO05D001065 1.8e-09 66.6 98 44.9
Manes.06G103500 Manihot esculenta HOM05D000086 ORTHO05D001065 3.1e-09 65.9 97 43.3
Peaxi162Scf00011g01119 Petunia axillaris HOM05D062872 ORTHO05D050254 3.1e-09 65.9 91 42.9
Solyc02g086950.1 Solanum lycopersicum HOM05D000086 ORTHO05D001065 4.0e-09 65.5 98 35.7
MSTRG.23120 Avicennia marina HOM05D000086 ORTHO05D001065 5.3e-09 65.1 90 41.1
ClCG01G013040 Citrullus lanatus HOM05D000086 ORTHO05D001065 5.3e-09 65.1 98 38.8
ECA232G1710 Erigeron canadensis HOM05D000086 ORTHO05D001065 6.9e-09 64.7 95 40.0
PGR044G1823 Punica granatum HOM05D000086 ORTHO05D001065 6.9e-09 64.7 92 37.0
PGSC0003DMG400000533 Solanum tuberosum HOM05D000086 ORTHO05D001065 1.2e-08 63.9 98 35.7
EL10Ac5g10775 Beta vulgaris HOM05D000086 ORTHO05D001065 1.5e-08 63.5 98 37.8
Prupe.5G175600 Prunus persica HOM05D000086 ORTHO05D001065 1.5e-08 63.5 91 39.6
TAR374G1721 Trochodendron aralioides HOM05D000086 ORTHO05D001065 1.5e-08 63.5 88 36.4
TWI56G0617 Tripterygium wilfordii HOM05D000086 ORTHO05D001065 2.0e-08 63.2 87 37.9
Psat5g114200 Pisum sativum HOM05D000086 ORTHO05D001065 2.6e-08 62.8 100 43.0
PGR142G3558 Punica granatum HOM05D000086 ORTHO05D001065 2.6e-08 62.8 91 37.4
Ca_16194_v3 Cicer arietinum L. HOM05D000086 ORTHO05D001065 3.4e-08 62.4 99 38.4
Actinidia06031 Actinidia chinensis HOM05D000086 ORTHO05D001065 4.5e-08 62.0 75 42.7
CiPaw.11G028400 Carya illinoinensis HOM05D000086 ORTHO05D001065 4.5e-08 62.0 91 44.0
MELO3C002255.2 Cucumis melo HOM05D000086 ORTHO05D001065 4.5e-08 62.0 92 39.1
Eucgr.B00359 Eucalyptus grandis HOM05D000086 ORTHO05D001065 4.5e-08 62.0 93 37.6
Manes.14G067200 Manihot esculenta HOM05D000086 ORTHO05D001065 4.5e-08 62.0 95 40.0
Sopen02g031720 Solanum pennellii HOM05D000086 ORTHO05D001065 4.5e-08 62.0 98 33.7
Peaxi162Scf00129g01020 Petunia axillaris HOM05D000086 ORTHO05D001065 5.8e-08 61.6 89 43.8
Nitab4.5_0007907g0030 Nicotiana tabacum HOM05D000086 ORTHO05D001065 1.3e-07 60.5 92 39.1
Sed0002756 Sechium edule HOM05D000086 ORTHO05D001065 1.3e-07 60.5 94 39.4
Sopen01g045970 Solanum pennellii HOM05D000086 ORTHO05D001065 1.3e-07 60.5 90 43.3
Glyma.04G181300 Glycine max HOM05D000086 ORTHO05D001065 1.7e-07 60.1 100 38.0
MSTRG.3303 Avicennia marina HOM05D000086 ORTHO05D001065 2.2e-07 59.7 89 43.8
Glyma.06G183600 Glycine max HOM05D000086 ORTHO05D001065 2.2e-07 59.7 94 39.4
MSTRG.15508 Avicennia marina HOM05D000086 ORTHO05D001065 4.9e-07 58.5 88 42.0
HanXRQChr16g0503701 Helianthus annuus HOM05D000086 ORTHO05D001065 6.4e-07 58.2 94 37.2
unitig_746.g26569 Utricularia gibba HOM05D000086 ORTHO05D001065 6.4e-07 58.2 89 40.4
ECA246G1421 Erigeron canadensis HOM05D000086 ORTHO05D001065 8.4e-07 57.8 92 38.0
Glyma.13G170300 Glycine max HOM05D000086 ORTHO05D001065 8.4e-07 57.8 85 37.6
SalBow1G1023 Salvia bowleyana HOM05D000086 ORTHO05D001065 8.4e-07 57.8 87 39.1
VMungo1309G2215 Vigna mungo HOM05D000086 ORTHO05D001065 1.1e-06 57.4 98 37.8
Phvul.004G017700 Phaseolus vulgaris HOM05D000086 ORTHO05D001065 2.4e-06 56.2 85 36.5
Phvul.009G179700 Phaseolus vulgaris HOM05D000086 ORTHO05D001065 2.4e-06 56.2 91 34.1
Lsat_1_v5_gn_4_74941 Lactuca sativa HOM05D000086 ORTHO05D001065 3.2e-06 55.8 94 36.2
Glyma.19G010400 Glycine max HOM05D000086 ORTHO05D001065 7.1e-06 54.7 85 36.5


User provided reference genes

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