Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16596 Vaccinium macrocarpon HOM05D004802 ORTHO05D005591 6.9e-111 404.1 216 100.0
CSS0033619 Camellia sinensis var. sinensis HOM05D004802 ORTHO05D005591 6.8e-66 254.6 144 93.8
Rhsim12G0162600 Rhododendron simsii HOM05D004802 ORTHO05D005591 2.0e-65 253.1 144 93.8
CsaV3_1G001710 Cucumis sativus L. HOM05D004802 ORTHO05D005591 1.4e-63 246.9 144 84.0
CANSAT80G2080 Cannabis sativa HOM05D004802 ORTHO05D005591 4.6e-62 241.9 144 88.9
ECA232G0284 Erigeron canadensis HOM05D004802 ORTHO05D005591 3.0e-61 239.2 144 82.6
Hma1.2p1_0483F.1_g162710 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 3.0e-61 239.2 144 84.0
Sed0010100 Sechium edule HOM05D004802 ORTHO05D005591 8.6e-61 237.7 144 81.9
Cpa.g.sc110.33 Carica papaya HOM05D004802 ORTHO05D005591 3.3e-60 235.7 144 81.2
SGA_v2.0_scaffold114G31844 Striga asiatica HOM05D004802 ORTHO05D005591 3.3e-60 235.7 144 86.8
Cfa019082 Carpinus fangiana HOM05D004802 ORTHO05D005591 1.2e-59 233.8 144 82.6
PGR083G1798 Punica granatum HOM05D004802 ORTHO05D005591 1.2e-59 233.8 144 82.6
MBI18_g21823_MAGBIO Magnolia biondii HOM05D004802 ORTHO05D005591 1.6e-59 233.4 144 86.1
GSVIVG01007807001 Vitis vinifera HOM05D004802 ORTHO05D005591 1.6e-59 233.4 144 80.6
Potri.014G111100 Populus trichocarpa HOM05D004802 ORTHO05D005591 4.7e-59 231.9 144 81.2
Actinidia34948 Actinidia chinensis HOM05D004802 ORTHO05D005591 8.1e-59 231.1 133 86.5
Glyma.04G171700 Glycine max HOM05D004802 ORTHO05D005591 1.1e-58 230.7 144 79.2
MD14G1184900 Malus domestica HOM05D004802 ORTHO05D005591 1.1e-58 230.7 166 75.3
Eucgr.B00348 Eucalyptus grandis HOM05D004802 ORTHO05D005591 1.4e-58 230.3 146 79.5
DCAR_021562 Daucus carota HOM05D004802 ORTHO05D005591 1.8e-58 229.9 144 79.2
Prupe.5G177600 Prunus persica HOM05D004802 ORTHO05D005591 1.8e-58 229.9 145 79.3
DCAR_016496 Daucus carota HOM05D004802 ORTHO05D005591 4.0e-58 228.8 144 78.5
Lalb_Chr23g0265291 Lupinus albus HOM05D004802 ORTHO05D005591 4.0e-58 228.8 154 74.0
TAR362G1012 Trochodendron aralioides HOM05D004802 ORTHO05D005591 5.2e-58 228.4 144 79.9
Glyma.06G192200 Glycine max HOM05D004802 ORTHO05D005591 8.9e-58 227.6 144 79.2
HanXRQChr05g0155531 Helianthus annuus HOM05D004802 ORTHO05D005591 8.9e-58 227.6 145 77.9
Lsat_1_v5_gn_5_17000 Lactuca sativa HOM05D004802 ORTHO05D005591 2.0e-57 226.5 144 77.1
MSTRG.23103 Avicennia marina HOM05D004802 ORTHO05D005591 2.6e-57 226.1 144 79.2
LjContig00081g0027263 Lotus japonicus HOM05D004802 ORTHO05D005591 4.4e-57 225.3 147 78.2
RcHm_v2.0_Chr7g0179521 Rosa chinensis HOM05D004802 ORTHO05D005591 4.4e-57 225.3 145 78.6
Actinidia19087 Actinidia chinensis HOM05D004802 ORTHO05D005591 7.5e-57 224.6 133 85.0
Migut.D01783 Erythranthe guttata HOM05D004802 ORTHO05D005591 1.3e-56 223.8 144 78.5
QL03p066954 Quercus lobata HOM05D004802 ORTHO05D005591 1.3e-56 223.8 143 79.7
Dinv41117 Davidia involucrata HOM05D001600 ORTHO05D001502 4.9e-56 221.9 172 69.2
Sc16g0001640 Simmondsia chinensis HOM05D004802 ORTHO05D005591 8.3e-56 221.1 145 81.4
Sp1g06517 Schrenkiella parvula HOM05D004802 ORTHO05D005591 1.1e-55 220.7 144 75.7
Nitab4.5_0000499g0020 Nicotiana tabacum HOM05D004802 ORTHO05D005591 1.4e-55 220.3 144 76.4
A09p66160 Brassica napus HOM05D004802 ORTHO05D005591 2.4e-55 219.5 144 76.4
BraA09t41954Z Brassica rapa HOM05D004802 ORTHO05D005591 2.4e-55 219.5 144 76.4
CDE01G0824 Ceratophyllum demersum HOM05D004802 ORTHO05D005591 2.4e-55 219.5 145 76.6
THA.LOC104818227 Tarenaya hassleriana HOM05D004802 ORTHO05D005591 2.4e-55 219.5 146 76.0
COL.COLO4_24762 Corchorus olitorius HOM05D004802 ORTHO05D005591 3.2e-55 219.2 145 83.4
Manes.12G158200 Manihot esculenta HOM05D004802 ORTHO05D005591 3.2e-55 219.2 146 77.4
AL1G18110 Arabidopsis lyrata HOM05D004802 ORTHO05D005591 5.4e-55 218.4 144 74.3
PGSC0003DMG400024483 Solanum tuberosum HOM05D004802 ORTHO05D005591 7.1e-55 218.0 144 81.9
Solyc03g114050.3 Solanum lycopersicum HOM05D004802 ORTHO05D005591 1.2e-54 217.2 144 78.5
Sopen03g033100 Solanum pennellii HOM05D004802 ORTHO05D005591 1.2e-54 217.2 144 78.5
arahy.Tifrunner.gnm1.ann1.J5PS4T Arachis hypogaea HOM05D004802 ORTHO05D005591 1.6e-54 216.9 146 76.0
Carub.0005s0629 Capsella rubella HOM05D004802 ORTHO05D005591 1.6e-54 216.9 145 78.6
Sc12g0005500 Simmondsia chinensis HOM05D004802 ORTHO05D005591 1.6e-54 216.9 144 73.6
ATR0796G060 Amborella trichopoda HOM05D004802 ORTHO05D005591 2.1e-54 216.5 144 74.3
BcaC07g42500 Brassica carinata HOM05D004802 ORTHO05D005591 2.1e-54 216.5 151 76.8
CARHR007640 Cardamine hirsuta HOM05D004802 ORTHO05D005591 2.1e-54 216.5 144 73.6
TWI75G1644 Tripterygium wilfordii HOM05D004802 ORTHO05D005591 2.1e-54 216.5 144 79.2
Potri.002G185800 Populus trichocarpa HOM05D004802 ORTHO05D005591 2.7e-54 216.1 145 78.6
VMungo1309G2385 Vigna mungo HOM05D004802 ORTHO05D005591 2.7e-54 216.1 152 73.7
MBI19_g12136_MAGBIO Magnolia biondii HOM05D004802 ORTHO05D005591 3.5e-54 215.7 144 76.4
THA.LOC104821462 Tarenaya hassleriana HOM05D004802 ORTHO05D005591 3.5e-54 215.7 146 76.7
Thecc.03G006700 Theobroma cacao HOM05D004802 ORTHO05D005591 3.5e-54 215.7 145 82.1
Aqoxy5G00387 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 4.6e-54 215.3 144 75.0
BcaC07g41973 Brassica carinata HOM05D004802 ORTHO05D005591 4.6e-54 215.3 148 73.6
C08p50320 Brassica napus HOM05D004802 ORTHO05D005591 4.6e-54 215.3 148 73.6
BolC8t52561H Brassica oleracea HOM05D004802 ORTHO05D005591 4.6e-54 215.3 148 73.6
TWI32G0003 Tripterygium wilfordii HOM05D004802 ORTHO05D005591 4.6e-54 215.3 144 77.8
arahy.Tifrunner.gnm1.ann1.H02ACK Arachis hypogaea HOM05D004802 ORTHO05D005591 6.0e-54 214.9 146 75.3
BcaB02g06722 Brassica carinata HOM05D004802 ORTHO05D005591 6.0e-54 214.9 147 76.9
BraA06t23701Z Brassica rapa HOM05D004802 ORTHO05D005591 7.8e-54 214.5 145 74.5
Ciclev10022742m.g Citrus clementina HOM05D004802 ORTHO05D005591 7.8e-54 214.5 145 80.7
Cc00_g03600 Coffea canephora HOM05D004802 ORTHO05D005591 7.8e-54 214.5 143 81.1
BolC5t29353H Brassica oleracea HOM05D000129 ORTHO05D005591 1.0e-53 214.2 145 73.8
AT1G07830 Arabidopsis thaliana HOM05D004802 ORTHO05D005591 1.3e-53 213.8 145 75.9
Aa31LG3G15940 Aethionema arabicum HOM05D004802 ORTHO05D005591 1.7e-53 213.4 146 79.5
Phvul.009G188900 Phaseolus vulgaris HOM05D004802 ORTHO05D005591 2.3e-53 213.0 144 75.0
Hund18328 Selenicereus undatus HOM05D004802 ORTHO05D005591 2.3e-53 213.0 143 76.9
Duzib068G0850 Durio zibethinus HOM05D004802 ORTHO05D005591 3.0e-53 212.6 148 80.4
PSO170G0191 Papaver somniferum HOM05D004802 ORTHO05D005591 3.9e-53 212.2 148 72.3
Atru.chr9.2421 Acer truncatum HOM05D004802 ORTHO05D005591 5.1e-53 211.8 152 74.3
MELO3C017111.2 Cucumis melo HOM05D004802 ORTHO05D005591 6.6e-53 211.5 220 55.0
SalBow2G1273 Salvia bowleyana HOM05D004802 ORTHO05D005591 6.6e-53 211.5 145 76.6
TPR.G6374 Trifolium pratense HOM05D004802 ORTHO05D005591 6.6e-53 211.5 144 73.6
Thhalv10009035m.g Eutrema salsugineum HOM05D004802 ORTHO05D005591 8.6e-53 211.1 145 77.9
PSO782G1633 Papaver somniferum HOM05D004802 ORTHO05D005591 8.6e-53 211.1 148 71.6
Psat2g170440 Pisum sativum HOM05D004802 ORTHO05D005591 8.6e-53 211.1 144 73.6
FvH4_5g16620 Fragaria vesca HOM05D004802 ORTHO05D005591 1.1e-52 210.7 145 74.5
TPR.G20968 Trifolium pratense HOM05D004802 ORTHO05D005591 1.5e-52 210.3 144 72.9
Ah.08g213760 Amaranthus hybridus HOM05D004802 ORTHO05D005591 1.9e-52 209.9 144 73.6
HanXRQChr05g0163301 Helianthus annuus HOM05D004802 ORTHO05D005591 1.9e-52 209.9 148 75.7
HanXRQChr05g0163571 Helianthus annuus HOM05D004802 ORTHO05D005591 1.9e-52 209.9 148 75.7
MD06G1178500 Malus domestica HOM05D004802 ORTHO05D005591 1.9e-52 209.9 113 90.3
FAN18G4009 Fragaria x ananassa HOM05D004802 ORTHO05D005591 3.3e-52 209.1 145 73.8
AUR62025410 Chenopodium quinoa HOM05D004802 ORTHO05D005591 9.5e-52 207.6 145 75.2
Manes.15G185900 Manihot esculenta HOM05D004802 ORTHO05D005591 9.5e-52 207.6 146 75.3
C05p05910 Brassica napus HOM05D005594 ORTHO05D006403 1.2e-51 207.2 140 73.6
Cpa.g.sc170.28 Carica papaya HOM05D004802 ORTHO05D005591 1.2e-51 207.2 133 75.2
FAN13G0264 Fragaria x ananassa HOM05D004802 ORTHO05D005591 2.1e-51 206.5 145 72.4
Oeu026523.1 Olea europaea HOM05D004802 ORTHO05D005591 2.1e-51 206.5 145 73.1
HPP92_014441 Vanilla planifolia HOM05D004802 ORTHO05D005591 2.1e-51 206.5 144 72.2
Aqoxy3G02494 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 2.8e-51 206.1 145 73.8
FAN08G2523 Fragaria x ananassa HOM05D004802 ORTHO05D005591 2.8e-51 206.1 143 74.1
Gohir.A12G276300 Gossypium hirsutum HOM05D004802 ORTHO05D005591 2.8e-51 206.1 147 77.6
Gorai.008G297400 Gossypium raimondii HOM05D004802 ORTHO05D005591 2.8e-51 206.1 147 77.6
Peaxi162Scf00689g00332 Petunia axillaris HOM05D004802 ORTHO05D005591 2.8e-51 206.1 144 75.0
unitig_27.g24928 Utricularia gibba HOM05D004802 ORTHO05D005591 3.6e-51 205.7 144 72.2
Aqoxy3G01788 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 4.7e-51 205.3 146 76.0
Peaxi162Scf00017g02344 Petunia axillaris HOM05D004802 ORTHO05D005591 4.7e-51 205.3 149 75.2
AUR62008830 Chenopodium quinoa HOM05D004802 ORTHO05D005591 6.2e-51 204.9 145 73.8
EL10Ac7g17734 Beta vulgaris HOM05D004802 ORTHO05D005591 1.1e-50 204.1 144 72.9
Thhalv10014955m.g Eutrema salsugineum HOM05D004802 ORTHO05D005591 1.1e-50 204.1 146 74.7
Gohir.D12G276900 Gossypium hirsutum HOM05D004802 ORTHO05D005591 1.1e-50 204.1 147 76.9
Ca_06425_v3 Cicer arietinum L. HOM05D000308 ORTHO05D000194 1.4e-50 203.8 112 87.5
arahy.Tifrunner.gnm1.ann1.RYE93B Arachis hypogaea HOM05D004802 ORTHO05D005591 1.8e-50 203.4 170 65.3
ECA246G1319 Erigeron canadensis HOM05D004802 ORTHO05D005591 1.8e-50 203.4 165 64.8
SEGI_23384 Sequoiadendron giganteum HOM05D004802 ORTHO05D005591 5.2e-50 201.8 144 72.9
Rhsim08G0169000 Rhododendron simsii HOM05D004802 ORTHO05D005591 2.0e-49 199.9 217 53.5
Nitab4.5_0001422g0100 Nicotiana tabacum HOM05D004802 ORTHO05D005591 2.6e-49 199.5 117 83.8
Medtr5g015850 Medicago truncatula HOM05D004802 ORTHO05D005591 3.4e-49 199.1 144 72.2
Hma1.2p1_2640F.1_g325880 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 2.2e-48 196.4 108 88.0
Zm00001eb378540 Zea mays HOM05D004802 ORTHO05D005591 1.4e-47 193.7 146 67.8
Os06g0128500 Oryza sativa ssp. japonica HOM05D004802 ORTHO05D005591 1.9e-47 193.4 146 72.6
Dinv25814 Davidia involucrata HOM05D004802 ORTHO05D005591 4.6e-46 188.7 109 81.7
FAN04G1836 Fragaria x ananassa HOM05D004802 ORTHO05D005591 3.9e-45 185.7 113 80.5
Nitab4.5_0008768g0020 Nicotiana tabacum HOM05D004802 ORTHO05D005591 8.1e-43 177.9 205 54.1
Haze_07452 Corylus avellana HOM05D004802 ORTHO05D005591 4.0e-42 175.6 114 77.2
ClCG06G016810 Citrullus lanatus HOM05D004802 ORTHO05D005591 5.2e-42 175.3 92 92.4
CiPaw.11G030400 Carya illinoinensis HOM05D004802 ORTHO05D005591 2.2e-40 169.9 108 79.6
RcHm_v2.0_Chr3g0484411 Rosa chinensis HOM05D004802 ORTHO05D005591 4.9e-40 168.7 90 91.1
QL10p013461 Quercus lobata HOM05D004802 ORTHO05D005591 1.4e-39 167.2 88 92.0
QL03p067058 Quercus lobata HOM05D004802 ORTHO05D005591 4.2e-39 165.6 88 90.9
Cc00_g07690 Coffea canephora HOM05D004802 ORTHO05D005591 3.9e-37 159.1 109 75.2
Nn2g12605 Nelumbo nucifera HOM05D004802 ORTHO05D005591 1.5e-33 147.1 125 65.6
Cc00_g30360 Coffea canephora HOM05D004802 ORTHO05D005591 1.9e-31 140.2 108 72.2
Pp3c17_20320 Physcomitrium patens HOM05D004802 ORTHO05D005591 4.2e-31 139.0 142 52.1
Nitab4.5_0000003g0430 Nicotiana tabacum HOM05D004802 ORTHO05D005591 2.7e-30 136.3 146 59.6
Mapoly0009s0030 Marchantia polymorpha HOM05D004802 ORTHO05D005591 1.0e-29 134.4 108 62.0
CBR_g30055 Chara braunii HOM05D004802 ORTHO05D005591 6.9e-26 121.7 108 58.3
RcHm_v2.0_Chr3g0484341 Rosa chinensis HOM05D004802 ORTHO05D005591 2.0e-25 120.2 63 95.2
Hma1.2p1_0107F.1_g051480 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 7.9e-22 108.2 60 91.7
SMO228G0088 Selaginella moellendorffii HOM05D004802 ORTHO05D005591 4.3e-20 102.4 86 57.0
SHI01132 Sapria himalayana HOM05D004802 ORTHO05D005591 5.6e-20 102.1 89 60.7
AagrBONN_evm.TU.Sc2ySwM_368.3252 Anthoceros agrestis HOM05D004802 ORTHO05D005591 2.1e-19 100.1 82 59.8
A06p04970 Brassica napus HOM05D004802 ORTHO05D005591 3.2e-15 86.3 113 46.9
CSS0004783 Camellia sinensis var. sinensis HOM05D004802 ORTHO05D005591 1.8e-13 80.5 59 69.5
MCO15G004 Micromonas commoda HOM05D004802 ORTHO05D005591 3.0e-13 79.7 104 43.3
Pp3c14_16960 Physcomitrium patens HOM05D004802 ORTHO05D005591 1.9e-12 77.0 63 60.3
Haze_26898 Corylus avellana HOM05D004802 ORTHO05D005591 1.3e-11 74.3 87 42.5
A09p37440 Brassica napus HOM05D004802 ORTHO05D005591 2.0e-09 67.0 48 68.8
Haze_07453 Corylus avellana HOM05D004802 ORTHO05D005591 2.6e-09 66.6 35 88.6
RcHm_v2.0_Chr2g0130991 Rosa chinensis HOM05D004802 ORTHO05D005591 5.9e-09 65.5 68 51.5
SHI01130 Sapria himalayana HOM05D004802 ORTHO05D005591 1.6e-06 57.4 55 54.5
PRCOL_00002926 Prasinoderma coloniale HOM05D004802 ORTHO05D005591 2.1e-06 57.0 98 39.8
Cfa024847 Carpinus fangiana HOM05D004802 ORTHO05D005591 3.6e-06 56.2 72 41.7
BcaC02g11004 Brassica carinata HOM05D004802 ORTHO05D005591 6.1e-06 55.5 43 65.1
A06p04960 Brassica napus HOM05D005594 ORTHO05D006403 6.1e-06 55.5 58 50.0
C04p22280 Brassica napus HOM05D004802 ORTHO05D020149 6.1e-06 55.5 43 65.1


User provided reference genes

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