Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16583 Vaccinium macrocarpon HOM05D006566 ORTHO05D004366 3.9e-142 508.4 322 100.0
CSS0042495 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 9.8e-85 317.8 347 70.0
Actinidia34964 Actinidia chinensis HOM05D006566 ORTHO05D004366 5.2e-78 295.4 342 68.7
Actinidia19077 Actinidia chinensis HOM05D006566 ORTHO05D004366 2.6e-77 293.1 325 60.0
QL10p013685 Quercus lobata HOM05D006566 ORTHO05D004366 2.6e-77 293.1 325 67.7
Potri.015G070100 Populus trichocarpa HOM05D006566 ORTHO05D004366 8.3e-76 288.1 343 61.8
Sabra15G0094200 Salix brachista HOM05D006566 ORTHO05D004366 5.4e-75 285.4 341 61.0
GSVIVG01007834001 Vitis vinifera HOM05D006566 ORTHO05D004366 1.2e-74 284.3 324 56.2
CSS0033214 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 3.5e-74 282.7 347 63.7
MD06G1182300 Malus domestica HOM05D006566 ORTHO05D004366 3.8e-73 279.3 341 63.9
Atru.chr9.2391 Acer truncatum HOM05D006566 ORTHO05D004366 1.5e-72 277.3 328 62.2
Sed0021978 Sechium edule HOM05D006566 ORTHO05D004366 1.5e-72 277.3 355 59.2
Manes.06G099800 Manihot esculenta HOM05D006566 ORTHO05D004366 1.2e-71 274.2 353 61.2
Solyc12g027740.3 Solanum lycopersicum HOM05D006566 ORTHO05D004366 1.4e-70 270.8 329 60.5
CAN.G1932.4 Capsicum annuum HOM05D006566 ORTHO05D004366 3.0e-70 269.6 360 60.8
Cpa.g.sc35.28 Carica papaya HOM05D006566 ORTHO05D004366 4.0e-70 269.2 331 63.7
Prupe.5G180400 Prunus persica HOM05D006566 ORTHO05D004366 1.2e-69 267.7 366 58.7
COL.COLO4_21450 Corchorus olitorius HOM05D006566 ORTHO05D004366 1.5e-69 267.3 324 59.9
CsaV3_1G008150 Cucumis sativus L. HOM05D006566 ORTHO05D004366 2.0e-69 266.9 369 58.0
Sopen12g012820 Solanum pennellii HOM05D006566 ORTHO05D004366 4.4e-69 265.8 346 56.9
TAR374G0618 Trochodendron aralioides HOM05D006566 ORTHO05D004366 3.7e-68 262.7 360 59.2
Thecc.03G002700 Theobroma cacao HOM05D006566 ORTHO05D004366 1.8e-67 260.4 358 58.1
RcHm_v2.0_Chr7g0179841 Rosa chinensis HOM05D006566 ORTHO05D004366 2.4e-67 260.0 349 60.5
Lsat_1_v5_gn_5_18061 Lactuca sativa HOM05D006566 ORTHO05D004366 5.4e-67 258.8 355 61.1
Gohir.D08G106700 Gossypium hirsutum HOM05D006566 ORTHO05D004366 7.0e-67 258.5 345 53.3
Gorai.004G113800 Gossypium raimondii HOM05D006566 ORTHO05D004366 9.2e-67 258.1 345 51.9
FAN13G1045 Fragaria x ananassa HOM05D006566 ORTHO05D004366 2.0e-66 256.9 344 58.1
Nn3g17040 Nelumbo nucifera HOM05D006566 ORTHO05D004366 5.9e-66 255.4 371 56.9
arahy.Tifrunner.gnm1.ann1.1VUR4R Arachis hypogaea HOM05D006566 ORTHO05D004366 7.8e-66 255.0 379 56.2
CiPaw.12G022600 Carya illinoinensis HOM05D006566 ORTHO05D004366 1.0e-65 254.6 386 55.7
FAN08G1664 Fragaria x ananassa HOM05D006566 ORTHO05D004366 1.0e-65 254.6 346 56.9
MD14G1188300 Malus domestica HOM05D006566 ORTHO05D004366 3.9e-65 252.7 353 57.2
PGR044G1407 Punica granatum HOM05D006566 ORTHO05D004366 3.9e-65 252.7 340 59.7
Eucgr.K02884 Eucalyptus grandis HOM05D006566 ORTHO05D004366 1.1e-64 251.1 367 56.9
Ca_21878_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 2.5e-64 250.0 344 59.0
Ca_21886_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 2.5e-64 250.0 344 59.0
arahy.Tifrunner.gnm1.ann1.0W0WAG Arachis hypogaea HOM05D006566 ORTHO05D004366 4.3e-64 249.2 364 56.6
ECA246G4585 Erigeron canadensis HOM05D006566 ORTHO05D004366 5.6e-64 248.8 327 60.2
THA.LOC104821469 Tarenaya hassleriana HOM05D006566 ORTHO05D004366 1.2e-63 247.7 328 57.0
CANSAT80G0898 Cannabis sativa HOM05D006566 ORTHO05D004366 1.0e-62 244.6 367 59.1
FvH4_5g16290 Fragaria vesca HOM05D006566 ORTHO05D004366 1.4e-62 244.2 349 58.5
Sp5g13910 Schrenkiella parvula HOM05D006566 ORTHO05D004366 1.8e-62 243.8 331 60.1
Carub.0005s1423 Capsella rubella HOM05D006566 ORTHO05D004366 2.3e-62 243.4 337 54.9
MSTRG.23070 Avicennia marina HOM05D006566 ORTHO05D004366 4.0e-62 242.7 353 58.1
C08p23010 Brassica napus HOM05D006566 ORTHO05D004366 4.0e-62 242.7 326 57.4
FAN04G3214 Fragaria x ananassa HOM05D006566 ORTHO05D004366 4.0e-62 242.7 343 58.9
FAN18G1223 Fragaria x ananassa HOM05D006566 ORTHO05D004366 4.0e-62 242.7 349 59.0
Lalb_Chr07g0182501 Lupinus albus HOM05D006566 ORTHO05D004366 6.8e-62 241.9 353 57.2
TPR.G38369 Trifolium pratense HOM05D006566 ORTHO05D004366 8.9e-62 241.5 374 55.1
Cfa019059 Carpinus fangiana HOM05D006566 ORTHO05D004366 1.2e-61 241.1 348 58.6
Cc04_g16230 Coffea canephora HOM05D006566 ORTHO05D004366 2.6e-61 240.0 358 57.5
SGA_v2.0_scaffold56G20079 Striga asiatica HOM05D006566 ORTHO05D004366 2.6e-61 240.0 332 60.8
Glyma.17G093800 Glycine max HOM05D006566 ORTHO05D004366 3.4e-61 239.6 324 57.1
BcaC07g39294 Brassica carinata HOM05D006566 ORTHO05D004366 5.8e-61 238.8 325 58.8
BolC8t49939H Brassica oleracea HOM05D006566 ORTHO05D004366 5.8e-61 238.8 325 58.8
Migut.I00099 Erythranthe guttata HOM05D006566 ORTHO05D004366 9.8e-61 238.0 336 57.4
Glyma.05G033200 Glycine max HOM05D006566 ORTHO05D004366 9.8e-61 238.0 322 58.1
Psat4g055720 Pisum sativum HOM05D006566 ORTHO05D004366 2.2e-60 236.9 367 56.1
CARHR156850 Cardamine hirsuta HOM05D006566 ORTHO05D004366 3.7e-60 236.1 341 49.9
ClCG01G014160 Citrullus lanatus HOM05D006566 ORTHO05D004366 3.7e-60 236.1 365 54.2
HanXRQChr14g0438811 Helianthus annuus HOM05D006566 ORTHO05D004366 4.9e-60 235.7 360 56.7
Lj4g0023975 Lotus japonicus HOM05D006566 ORTHO05D004366 4.9e-60 235.7 359 56.5
Rhsim12G0161000 Rhododendron simsii HOM05D006566 ORTHO05D004366 4.9e-60 235.7 323 53.9
VMungo1215G1614 Vigna mungo HOM05D006566 ORTHO05D004366 6.4e-60 235.3 347 57.1
Nitab4.5_0003577g0010 Nicotiana tabacum HOM05D006566 ORTHO05D004366 3.2e-59 233.0 326 50.3
Nitab4.5_0000026g0410 Nicotiana tabacum HOM05D006566 ORTHO05D004366 4.1e-59 232.6 326 50.0
BcaB01g00844 Brassica carinata HOM05D006566 ORTHO05D004366 9.2e-59 231.5 334 58.7
Aqoxy3G00871 Aquilegia oxysepala HOM05D006566 ORTHO05D004366 1.2e-58 231.1 343 59.2
AT3G48120 Arabidopsis thaliana HOM05D006566 ORTHO05D004366 4.6e-58 229.2 336 51.5
unitig_749.g13457 Utricularia gibba HOM05D006566 ORTHO05D004366 6.0e-58 228.8 338 55.0
Thhalv10010547m.g Eutrema salsugineum HOM05D006566 ORTHO05D004366 7.8e-58 228.4 334 58.1
MELO3C002232.2 Cucumis melo HOM05D006566 ORTHO05D004366 1.0e-57 228.0 371 52.8
Medtr4g106550 Medicago truncatula HOM05D006566 ORTHO05D004366 2.1e-55 220.3 376 52.7
Phvul.003G196400 Phaseolus vulgaris HOM05D006566 ORTHO05D004366 3.6e-55 219.5 357 55.5
AUR62008294 Chenopodium quinoa HOM05D006566 ORTHO05D004366 8.1e-55 218.4 391 51.2
AL5G27450 Arabidopsis lyrata HOM05D006566 ORTHO05D004366 1.1e-54 218.0 326 52.8
Aa31LG4G16730 Aethionema arabicum HOM05D006566 ORTHO05D004366 2.6e-53 213.4 352 48.3
PSO161G0080 Papaver somniferum HOM05D006566 ORTHO05D004366 3.4e-53 213.0 377 52.0
BcaC07g39293 Brassica carinata HOM05D006566 ORTHO05D004366 1.3e-52 211.1 325 56.6
A06p19570 Brassica napus HOM05D006566 ORTHO05D004366 1.9e-51 207.2 325 56.0
Hma1.2p1_0572F.1_g181020 Hydrangea macrophylla HOM05D006566 ORTHO05D004366 1.9e-51 207.2 331 56.8
MBI16_g07135_MAGBIO Magnolia biondii HOM05D006566 ORTHO05D004366 3.2e-51 206.5 365 44.1
EL10Ac5g10849 Beta vulgaris HOM05D006566 ORTHO05D004366 4.6e-50 202.6 391 48.1
Ah.11g046290 Amaranthus hybridus HOM05D006566 ORTHO05D004366 3.9e-49 199.5 380 49.5
Oeu005686.3 Olea europaea HOM05D006566 ORTHO05D004366 2.1e-47 193.7 322 49.1
Sabra15G0095700 Salix brachista HOM05D006566 ORTHO05D004366 1.1e-43 181.4 145 68.3
BraA06t25037Z Brassica rapa HOM05D006566 ORTHO05D004366 3.2e-43 179.9 313 54.3
AUR62031056 Chenopodium quinoa HOM05D006566 ORTHO05D004366 3.2e-43 179.9 283 54.4
Dinv13130 Davidia involucrata HOM05D006566 ORTHO05D004366 3.2e-43 179.9 276 61.2
Sabra15G0094500 Salix brachista HOM05D006566 ORTHO05D004366 7.1e-43 178.7 157 63.1
Zm00001eb156370 Zea mays HOM05D006566 ORTHO05D004366 7.8e-42 175.3 335 49.9
Os01g0687600 Oryza sativa ssp. japonica HOM05D006566 ORTHO05D004366 5.1e-41 172.6 346 44.8
Haze_07429 Corylus avellana HOM05D006566 ORTHO05D004366 3.3e-40 169.9 199 52.3
Hund02706 Selenicereus undatus HOM05D006566 ORTHO05D004366 4.3e-40 169.5 396 43.2
ATR0712G004 Amborella trichopoda HOM05D006566 ORTHO05D004366 2.1e-34 150.6 380 45.0
DCAR_026101 Daucus carota HOM05D006566 ORTHO05D004366 8.7e-33 145.2 123 62.6
arahy.Tifrunner.gnm1.ann1.JH7UH9 Arachis hypogaea HOM05D006566 ORTHO05D004366 1.1e-32 144.8 119 60.5
Sc04g0002180 Simmondsia chinensis HOM05D006566 ORTHO05D004366 1.1e-32 144.8 287 50.9
Gohir.A08G095200 Gossypium hirsutum HOM05D006566 ORTHO05D004366 2.8e-31 140.2 257 51.8
CDE06G0758 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 1.1e-30 138.3 152 51.3
SalBow5G4198 Salvia bowleyana HOM05D006566 ORTHO05D004366 9.9e-29 131.7 114 59.6
Ciclev10023573m.g Citrus clementina HOM05D006566 ORTHO05D004366 4.3e-24 116.3 170 47.1
HPP92_021882 Vanilla planifolia HOM05D006566 ORTHO05D004366 7.4e-24 115.5 272 39.3
arahy.Tifrunner.gnm1.ann1.SD125V Arachis hypogaea HOM05D006566 ORTHO05D004366 1.3e-23 114.8 103 55.3
Mapoly0207s0010 Marchantia polymorpha HOM05D006566 ORTHO05D004366 6.2e-23 112.5 216 38.4
arahy.Tifrunner.gnm1.ann1.USZI6Q Arachis hypogaea HOM05D006566 ORTHO05D004366 4.5e-21 106.3 153 43.1
SEGI_22753 Sequoiadendron giganteum HOM05D006566 ORTHO05D004366 4.5e-21 106.3 497 29.2
SMO367G0338 Selaginella moellendorffii HOM05D013869 ORTHO05D015602 2.2e-20 104.0 169 39.1
Lj5P120T28 Lonicera japonica HOM05D006566 ORTHO05D004366 2.9e-20 103.6 91 69.2
AagrBONN_evm.TU.Sc2ySwM_344.1183 Anthoceros agrestis HOM05D006566 ORTHO05D004366 3.8e-20 103.2 402 33.6
Lj5A120T53 Lonicera japonica HOM05D006566 ORTHO05D004366 1.4e-19 101.3 89 55.1
Peaxi162Scf00496g00038 Petunia axillaris HOM05D006566 ORTHO05D004366 5.5e-19 99.4 92 57.6
Pp3c10_4330 Physcomitrium patens HOM05D006566 ORTHO05D004366 5.1e-17 92.8 186 35.5
CDE06G1032 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 2.5e-16 90.5 114 56.1
arahy.Tifrunner.gnm1.ann1.281UCZ Arachis hypogaea HOM05D008215 ORTHO05D004366 2.1e-15 87.4 117 45.3
Nn2g10835 Nelumbo nucifera HOM05D006566 ORTHO05D004366 2.8e-15 87.0 79 67.1
arahy.Tifrunner.gnm1.ann1.UC8GQG Arachis hypogaea HOM05D008215 ORTHO05D004366 3.7e-15 86.7 116 44.8
arahy.Tifrunner.gnm1.ann1.8QJJ59 Arachis hypogaea HOM05D008215 ORTHO05D004366 8.1e-15 85.5 113 45.1
arahy.Tifrunner.gnm1.ann1.P21766 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.1e-14 85.1 120 42.5
arahy.Tifrunner.gnm1.ann1.08U2RY Arachis hypogaea HOM05D008215 ORTHO05D004366 9.0e-14 82.0 117 43.6
Nn8g38961 Nelumbo nucifera HOM05D006566 ORTHO05D004366 1.7e-12 77.8 77 62.3
arahy.Tifrunner.gnm1.ann1.38ZYM9 Arachis hypogaea HOM05D008215 ORTHO05D004366 2.2e-12 77.4 79 51.9
arahy.Tifrunner.gnm1.ann1.N3K4CS Arachis hypogaea HOM05D008215 ORTHO05D004366 1.1e-11 75.1 96 44.8
arahy.Tifrunner.gnm1.ann1.696ALD Arachis hypogaea HOM05D008215 ORTHO05D004366 1.9e-11 74.3 75 56.0
arahy.Tifrunner.gnm1.ann1.YEU6LJ Arachis hypogaea HOM05D006566 ORTHO05D004366 7.1e-11 72.4 62 58.1
arahy.Tifrunner.gnm1.ann1.1NHG9F Arachis hypogaea HOM05D008215 ORTHO05D004366 6.0e-10 69.3 114 37.7
arahy.Tifrunner.gnm1.ann1.1P551D Arachis hypogaea HOM05D008215 ORTHO05D004366 1.0e-09 68.6 103 42.7
arahy.Tifrunner.gnm1.ann1.0AYN0M Arachis hypogaea HOM05D008215 ORTHO05D004366 3.0e-09 67.0 101 43.6
arahy.Tifrunner.gnm1.ann1.P43TQX Arachis hypogaea HOM05D006566 ORTHO05D004366 5.1e-09 66.2 41 73.2
arahy.Tifrunner.gnm1.ann1.01UHHT Arachis hypogaea HOM05D008215 ORTHO05D004366 6.7e-09 65.9 106 40.6
arahy.Tifrunner.gnm1.ann1.3DHQ20 Arachis hypogaea HOM05D008215 ORTHO05D004366 6.7e-09 65.9 106 40.6
arahy.Tifrunner.gnm1.ann1.U9CRBQ Arachis hypogaea HOM05D008215 ORTHO05D004366 8.7e-09 65.5 100 43.0
arahy.Tifrunner.gnm1.ann1.TAU4F3 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.5e-08 64.7 89 43.8
arahy.Tifrunner.gnm1.ann1.KE1U92 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.9e-08 64.3 100 42.0
arahy.Tifrunner.gnm1.ann1.PJX35B Arachis hypogaea HOM05D008215 ORTHO05D004366 1.9e-08 64.3 106 40.6
Oeu042970.1 Olea europaea HOM05D006566 ORTHO05D004366 1.9e-08 64.3 86 48.8
arahy.Tifrunner.gnm1.ann1.P1RV09 Arachis hypogaea HOM05D008215 ORTHO05D004366 2.5e-08 63.9 100 42.0
arahy.Tifrunner.gnm1.ann1.8K6P1P Arachis hypogaea HOM05D008215 ORTHO05D004366 3.3e-08 63.5 101 40.6
arahy.Tifrunner.gnm1.ann1.N5TKCQ Arachis hypogaea HOM05D008215 ORTHO05D004366 5.7e-08 62.8 116 37.1
arahy.Tifrunner.gnm1.ann1.U6CLNF Arachis hypogaea HOM05D008215 ORTHO05D004366 7.4e-08 62.4 103 39.8
arahy.Tifrunner.gnm1.ann1.15M8G9 Arachis hypogaea HOM05D008215 ORTHO05D004366 3.7e-07 60.1 100 40.0
arahy.Tifrunner.gnm1.ann1.J3W7RL Arachis hypogaea HOM05D008215 ORTHO05D004366 3.7e-07 60.1 100 41.0
arahy.Tifrunner.gnm1.ann1.8PL5QC Arachis hypogaea HOM05D008215 ORTHO05D004366 4.8e-07 59.7 101 39.6
arahy.Tifrunner.gnm1.ann1.4R5VT1 Arachis hypogaea HOM05D008215 ORTHO05D004366 3.1e-06 57.0 64 46.9
arahy.Tifrunner.gnm1.ann1.53FFQK Arachis hypogaea HOM05D008215 ORTHO05D004366 3.1e-06 57.0 64 46.9
arahy.Tifrunner.gnm1.ann1.65QQ6U Arachis hypogaea HOM05D008215 ORTHO05D004366 5.3e-06 56.2 57 50.9
arahy.Tifrunner.gnm1.ann1.BH3K81 Arachis hypogaea HOM05D008215 ORTHO05D004366 6.9e-06 55.8 57 52.6
arahy.Tifrunner.gnm1.ann1.IYQ4QW Arachis hypogaea HOM05D008215 ORTHO05D004366 6.9e-06 55.8 57 52.6
arahy.Tifrunner.gnm1.ann1.TNWQ22 Arachis hypogaea HOM05D008215 ORTHO05D004366 6.9e-06 55.8 57 52.6
arahy.Tifrunner.gnm1.ann1.J7IPJF Arachis hypogaea HOM05D008215 ORTHO05D004366 9.0e-06 55.5 61 47.5
arahy.Tifrunner.gnm1.ann1.N8KI2G Arachis hypogaea HOM05D008215 ORTHO05D004366 9.0e-06 55.5 61 47.5
arahy.Tifrunner.gnm1.ann1.PGWD8S Arachis hypogaea HOM05D008215 ORTHO05D004366 9.0e-06 55.5 61 47.5
arahy.Tifrunner.gnm1.ann1.XH4RCS Arachis hypogaea HOM05D008215 ORTHO05D004366 9.0e-06 55.5 61 47.5


User provided reference genes

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