Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16554 Vaccinium macrocarpon HOM05D005938 ORTHO05D007654 6.9e-229 797.0 408 100.0
Rhsim12G0157100 Rhododendron simsii HOM05D005938 ORTHO05D007654 6.4e-142 508.1 351 78.3
Actinidia34992 Actinidia chinensis HOM05D005938 ORTHO05D007654 5.0e-126 455.3 348 70.7
CSS0017360 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 5.0e-126 455.3 350 70.3
CSS0040883 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 5.0e-126 455.3 350 70.3
Atru.chr9.2268 Acer truncatum HOM05D005938 ORTHO05D007654 4.7e-116 422.2 343 64.7
Lalb_Chr08g0235801 Lupinus albus HOM05D005938 ORTHO05D007654 3.3e-114 416.0 353 64.0
TAR374G0085 Trochodendron aralioides HOM05D005938 ORTHO05D007654 7.4e-114 414.8 350 64.3
Sc10g0009920 Simmondsia chinensis HOM05D005938 ORTHO05D007654 2.2e-113 413.3 349 63.6
Lj1g0012745 Lotus japonicus HOM05D005938 ORTHO05D007654 6.3e-113 411.8 339 63.4
Gohir.D12G179280 Gossypium hirsutum HOM05D005938 ORTHO05D007654 1.1e-112 411.0 347 62.8
GSVIVG01008024001 Vitis vinifera HOM05D005938 ORTHO05D007654 2.6e-111 406.4 347 63.1
Gohir.A12G176500 Gossypium hirsutum HOM05D005938 ORTHO05D007654 7.7e-111 404.8 347 61.4
Glyma.06G192800 Glycine max HOM05D005938 ORTHO05D007654 3.8e-110 402.5 338 63.9
Lj9A462G75 Lonicera japonica HOM05D005938 ORTHO05D007654 6.5e-110 401.7 318 64.8
PGSC0003DMG400000598 Solanum tuberosum HOM05D005938 ORTHO05D007654 6.5e-110 401.7 345 62.0
Ciclev10021191m.g Citrus clementina HOM05D005938 ORTHO05D007654 3.2e-109 399.4 343 63.3
QL10p016543 Quercus lobata HOM05D005938 ORTHO05D007654 4.2e-109 399.1 338 63.9
CAN.G407.117 Capsicum annuum HOM05D005938 ORTHO05D007654 5.5e-109 398.7 345 62.0
CsaV3_1G002270 Cucumis sativus L. HOM05D005938 ORTHO05D007654 7.2e-109 398.3 345 61.7
PGR083G1660 Punica granatum HOM05D005938 ORTHO05D007654 9.4e-109 397.9 351 62.1
CiPaw.11G042800 Carya illinoinensis HOM05D005938 ORTHO05D007654 4.7e-108 395.6 341 61.6
Solyc03g116330.3 Solanum lycopersicum HOM05D005938 ORTHO05D007654 4.7e-108 395.6 345 61.2
CANSAT80G1410 Cannabis sativa HOM05D005938 ORTHO05D007654 8.0e-108 394.8 345 62.3
Phvul.009G188150 Phaseolus vulgaris HOM05D005938 ORTHO05D007654 1.8e-107 393.7 339 61.1
Prupe.5G190900 Prunus persica HOM05D005938 ORTHO05D007654 6.7e-107 391.7 337 62.3
Ca_13688_v3 Cicer arietinum L. HOM05D005938 ORTHO05D007654 8.8e-107 391.3 341 60.4
MELO3C017167.2 Cucumis melo HOM05D005938 ORTHO05D007654 3.3e-106 389.4 345 61.4
FAN08G1160 Fragaria x ananassa HOM05D005938 ORTHO05D007654 4.4e-106 389.0 339 61.7
TAR622G1433 Trochodendron aralioides HOM05D005938 ORTHO05D007654 9.7e-106 387.9 320 65.3
Sed0010411 Sechium edule HOM05D005938 ORTHO05D007654 1.3e-105 387.5 345 60.9
Cc04_g16920 Coffea canephora HOM05D005938 ORTHO05D007654 2.8e-105 386.3 346 59.8
Nitab4.5_0004103g0010 Nicotiana tabacum HOM05D005938 ORTHO05D007654 2.8e-105 386.3 345 60.9
COL.COLO4_24542 Corchorus olitorius HOM05D005938 ORTHO05D007654 3.7e-105 386.0 317 65.6
FvH4_5g15170 Fragaria vesca HOM05D005938 ORTHO05D007654 4.8e-105 385.6 339 61.7
Nn3g17204 Nelumbo nucifera HOM05D005938 ORTHO05D007654 6.3e-105 385.2 347 59.7
MSTRG.9633 Avicennia marina HOM05D005938 ORTHO05D007654 1.4e-104 384.0 347 57.9
Cfa018959 Carpinus fangiana HOM05D005938 ORTHO05D007654 1.8e-104 383.6 303 67.0
FAN13G2109 Fragaria x ananassa HOM05D005938 ORTHO05D007654 4.1e-104 382.5 335 61.8
FAN18G0122 Fragaria x ananassa HOM05D005938 ORTHO05D007654 9.1e-104 381.3 335 61.8
TWI15G1099 Tripterygium wilfordii HOM05D005938 ORTHO05D007654 1.6e-103 380.6 294 67.3
Peaxi162Scf00274g00846 Petunia axillaris HOM05D005938 ORTHO05D007654 2.0e-103 380.2 351 60.1
Eucgr.A02632 Eucalyptus grandis HOM05D005938 ORTHO05D007654 2.6e-103 379.8 338 62.1
FAN04G0099 Fragaria x ananassa HOM05D005938 ORTHO05D007654 3.5e-103 379.4 330 62.4
Hund09357 Selenicereus undatus HOM05D005938 ORTHO05D007654 4.5e-103 379.0 348 61.2
Dinv38693 Davidia involucrata HOM05D005938 ORTHO05D007654 7.7e-103 378.3 289 69.2
RcHm_v2.0_Chr7g0181011 Rosa chinensis HOM05D005938 ORTHO05D007654 1.0e-102 377.9 338 60.4
Potri.018G047400 Populus trichocarpa HOM05D005938 ORTHO05D007654 1.7e-102 377.1 315 65.1
Duzib205G1012 Durio zibethinus HOM05D005938 ORTHO05D007654 2.2e-102 376.7 347 60.5
HanXRQChr05g0158101 Helianthus annuus HOM05D005938 ORTHO05D007654 3.8e-102 375.9 346 59.5
TPR.G11812 Trifolium pratense HOM05D005938 ORTHO05D007654 3.8e-102 375.9 340 59.1
arahy.Tifrunner.gnm1.ann1.KGI6NM Arachis hypogaea HOM05D005938 ORTHO05D007654 5.0e-102 375.6 348 58.3
arahy.Tifrunner.gnm1.ann1.VVHC1U Arachis hypogaea HOM05D005938 ORTHO05D007654 5.0e-102 375.6 348 58.6
MD06G1191700 Malus domestica HOM05D005938 ORTHO05D007654 2.5e-101 373.2 338 60.7
DCAR_021525 Daucus carota HOM05D005938 ORTHO05D007654 5.5e-101 372.1 333 61.3
Atru.BG.195.p Acer truncatum HOM05D005938 ORTHO05D007654 7.2e-101 371.7 290 67.2
Ah.02g113360 Amaranthus hybridus HOM05D005938 ORTHO05D007654 1.2e-100 370.9 296 65.9
Migut.D01830 Erythranthe guttata HOM05D005938 ORTHO05D007654 2.7e-100 369.8 343 57.1
Gorai.008G192300 Gossypium raimondii HOM05D005938 ORTHO05D007654 2.7e-100 369.8 331 59.8
SalBow7G2600 Salvia bowleyana HOM05D005938 ORTHO05D007654 4.7e-100 369.0 349 55.6
Nitab4.5_0002257g0140 Nicotiana tabacum HOM05D005938 ORTHO05D007654 6.1e-100 368.6 373 55.5
Sabra18G0045600 Salix brachista HOM05D005938 ORTHO05D007654 6.1e-100 368.6 340 59.4
EL10Ac5g10981 Beta vulgaris HOM05D005938 ORTHO05D007654 8.0e-100 368.2 301 64.8
MD14G1198100 Malus domestica HOM05D005938 ORTHO05D007654 1.4e-99 367.5 337 58.5
PSO063G3647 Papaver somniferum HOM05D005938 ORTHO05D007654 1.8e-99 367.1 342 59.1
Lsat_1_v5_gn_5_19401 Lactuca sativa HOM05D005938 ORTHO05D007654 3.0e-99 366.3 345 58.3
ECA246G4427 Erigeron canadensis HOM05D005938 ORTHO05D007654 2.0e-98 363.6 345 57.4
Thecc.03G084300 Theobroma cacao HOM05D005938 ORTHO05D007654 3.4e-98 362.8 347 58.2
AL2G34410 Arabidopsis lyrata HOM05D005938 ORTHO05D007654 3.7e-97 359.4 334 58.4
BraA07t31575Z Brassica rapa HOM05D005938 ORTHO05D007654 1.4e-96 357.5 345 57.7
AUR62021711 Chenopodium quinoa HOM05D005938 ORTHO05D007654 1.8e-96 357.1 294 65.3
ClCG06G016260 Citrullus lanatus HOM05D005938 ORTHO05D007654 4.1e-96 355.9 345 58.0
Sopen03g035260 Solanum pennellii HOM05D005938 ORTHO05D007654 4.1e-96 355.9 284 63.7
AUR62008387 Chenopodium quinoa HOM05D005938 ORTHO05D007654 5.3e-96 355.5 294 65.0
A07p40340 Brassica napus HOM05D005938 ORTHO05D007654 7.0e-96 355.1 334 58.1
CARHR067810 Cardamine hirsuta HOM05D005938 ORTHO05D007654 7.0e-96 355.1 337 57.6
Sp5g29710 Schrenkiella parvula HOM05D005938 ORTHO05D007654 3.5e-95 352.8 336 58.0
Cpa.g.c30141.1 Carica papaya HOM05D005938 ORTHO05D007654 5.9e-95 352.1 294 63.6
Carub.0002s2133 Capsella rubella HOM05D005938 ORTHO05D007654 1.3e-94 350.9 334 57.8
THA.LOC104812546 Tarenaya hassleriana HOM05D005938 ORTHO05D007654 5.0e-94 349.0 345 57.4
Thhalv10018904m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 1.1e-93 347.8 334 56.6
BcaC08g46988 Brassica carinata HOM05D005938 ORTHO05D007654 1.5e-93 347.4 332 57.5
Oeu016169.1 Olea europaea HOM05D005938 ORTHO05D007654 3.2e-93 346.3 295 62.0
Psat5g187160 Pisum sativum HOM05D005938 ORTHO05D007654 7.2e-93 345.1 310 59.7
BcaC08g46886 Brassica carinata HOM05D005938 ORTHO05D007654 2.1e-92 343.6 338 56.8
unitig_744.g24387 Utricularia gibba HOM05D005938 ORTHO05D007654 2.1e-92 343.6 342 52.9
Manes.06G094000 Manihot esculenta HOM05D005938 ORTHO05D007654 1.8e-91 340.5 344 55.2
ATR0564G381 Amborella trichopoda HOM05D005938 ORTHO05D007654 1.3e-89 334.3 318 57.2
SGA_v2.0_scaffold114G31898 Striga asiatica HOM05D005938 ORTHO05D007654 6.3e-89 332.0 350 52.3
Os08g0171000 Oryza sativa ssp. japonica HOM05D005938 ORTHO05D007654 8.3e-89 331.6 311 55.9
Aa31LG7G3570 Aethionema arabicum HOM05D005938 ORTHO05D007654 4.5e-87 325.9 337 54.3
Aqoxy3G03351 Aquilegia oxysepala HOM05D005938 ORTHO05D007654 2.3e-86 323.6 304 60.2
Haze_07341 Corylus avellana HOM05D005938 ORTHO05D007654 8.0e-84 315.1 408 49.3
SEGI_36934 Sequoiadendron giganteum HOM05D005938 ORTHO05D007654 8.0e-84 315.1 353 49.9
CDE02G0021 Ceratophyllum demersum HOM05D005938 ORTHO05D007654 1.4e-83 314.3 305 54.4
SHI04241 Sapria himalayana HOM05D005938 ORTHO05D007654 7.5e-82 308.5 357 51.3
BcaC08g46884 Brassica carinata HOM05D005938 ORTHO05D007654 7.8e-79 298.5 368 49.2
CSS0050188 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 1.2e-76 291.2 255 66.3
BolC6t39901H Brassica oleracea HOM05D005938 ORTHO05D007654 3.6e-76 289.7 278 58.3
Aa31LG4G4790 Aethionema arabicum HOM05D005938 ORTHO05D007654 4.7e-76 289.3 276 56.9
C06p48680 Brassica napus HOM05D005938 ORTHO05D007654 1.0e-75 288.1 282 57.4
AT1G74530 Arabidopsis thaliana HOM05D005938 ORTHO05D007654 6.8e-75 285.4 275 57.8
Mapoly0002s0073 Marchantia polymorpha HOM05D005938 ORTHO05D007654 3.2e-72 276.6 305 48.9
Medtr0036s0320 Medicago truncatula HOM05D005938 ORTHO05D007654 2.2e-65 253.8 198 64.1
VMungo1309G2195 Vigna mungo HOM05D005938 ORTHO05D007654 1.4e-64 251.1 171 71.9
Hma1.2p1_0735F.1_g210490 Hydrangea macrophylla HOM05D005938 ORTHO05D007654 4.1e-64 249.6 159 77.4
Pp3c17_15280 Physcomitrium patens HOM05D005938 ORTHO05D007654 1.6e-60 237.7 308 44.8
MBI02_g23681_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 8.1e-60 235.3 162 73.5
SMO270G0117 Selaginella moellendorffii HOM05D005938 ORTHO05D007654 3.7e-57 226.5 299 44.1
AagrBONN_evm.TU.Sc2ySwM_117.1670 Anthoceros agrestis HOM05D005938 ORTHO05D007654 6.0e-55 219.2 298 43.3
CBR_g66809 Chara braunii HOM05D005938 ORTHO05D007654 1.2e-52 211.5 302 39.7
FAN10G3346 Fragaria x ananassa HOM05D005938 ORTHO05D007654 5.2e-51 206.1 182 62.1
Glyma.04G170700 Glycine max HOM05D005938 ORTHO05D007654 3.5e-47 193.4 194 56.7
Zm00001eb415000 Zea mays HOM05D005938 ORTHO05D007654 1.0e-46 191.8 187 57.8
Medtr3g040450 Medicago truncatula HOM05D005938 ORTHO05D007654 2.9e-33 147.1 118 65.3
MCO16G029 Micromonas commoda HOM05D005938 ORTHO05D007654 2.9e-33 147.1 298 34.2
arahy.Tifrunner.gnm1.ann1.518D86 Arachis hypogaea HOM05D005938 ORTHO05D007654 2.4e-32 144.1 181 47.0
MBI15_g27838_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 2.3e-30 137.5 170 49.4
FAN18G0131 Fragaria x ananassa HOM05D005938 ORTHO05D007654 5.1e-30 136.3 194 45.9
VMungo0019G0001 Vigna mungo HOM05D005938 ORTHO05D007654 6.7e-30 136.0 112 64.3
QL07p001114 Quercus lobata HOM05D005938 ORTHO05D007654 3.7e-28 130.2 165 50.3
FAN01G1759 Fragaria x ananassa HOM05D005938 ORTHO05D007654 4.8e-28 129.8 110 63.6
CSS0038577 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 2.6e-26 124.0 84 71.4
Prupe.5G190800 Prunus persica HOM05D005938 ORTHO05D007654 4.3e-21 106.7 92 59.8
Cre12.g513300 Chlamydomonas reinhardtii HOM05D005938 ORTHO05D007654 6.2e-20 102.8 230 32.6
PRCOL_00003564 Prasinoderma coloniale HOM05D005938 ORTHO05D007654 6.2e-20 102.8 176 36.9
MD17G1094500 Malus domestica HOM05D005938 ORTHO05D007654 2.4e-19 100.9 70 71.4
QL02p071402 Quercus lobata HOM05D005938 ORTHO05D028155 3.0e-14 84.0 105 44.8
QL12p034017 Quercus lobata HOM05D000176 ORTHO05D000106 1.9e-13 81.3 176 34.1
MCO06G261 Micromonas commoda HOM05D005938 ORTHO05D044307 1.0e-06 58.9 148 29.1


User provided reference genes

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