Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16552 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 5.6e-104 380.9 192 100.0
Dinv41564 Davidia involucrata HOM05D006752 ORTHO05D008088 1.7e-12 77.0 144 43.1
vmacro20677 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 2.9e-12 76.3 144 41.7
Cpa.g.sc23.161 Carica papaya HOM05D006393 ORTHO05D008088 5.0e-12 75.5 146 40.4
Aa31LG9G6050 Aethionema arabicum HOM05D006393 ORTHO05D008088 6.6e-12 75.1 145 40.7
Lj7A639G46 Lonicera japonica HOM05D006393 ORTHO05D008088 8.6e-12 74.7 157 40.1
Cfa003299 Carpinus fangiana HOM05D006393 ORTHO05D008088 1.9e-11 73.6 144 42.4
AUR62033415 Chenopodium quinoa HOM05D006393 ORTHO05D008088 1.9e-11 73.6 144 41.0
Actinidia09396 Actinidia chinensis HOM05D006393 ORTHO05D008088 2.5e-11 73.2 143 43.4
A10p19800 Brassica napus HOM05D006393 ORTHO05D008088 2.5e-11 73.2 147 40.8
BraA10t44056Z Brassica rapa HOM05D006393 ORTHO05D008088 2.5e-11 73.2 147 40.8
Duzib168G1441 Durio zibethinus HOM05D006393 ORTHO05D008088 2.5e-11 73.2 144 43.1
Hma1.2p1_0018F.1_g013070 Hydrangea macrophylla HOM05D006393 ORTHO05D008088 2.5e-11 73.2 144 43.1
Prupe.7G235100 Prunus persica HOM05D006393 ORTHO05D008088 2.5e-11 73.2 144 41.7
Rhsim01G0090600 Rhododendron simsii HOM05D006393 ORTHO05D008088 2.5e-11 73.2 144 41.0
Haze_25669 Corylus avellana HOM05D006393 ORTHO05D008088 3.3e-11 72.8 144 41.7
Thecc.09G116800 Theobroma cacao HOM05D006393 ORTHO05D008088 3.3e-11 72.8 144 43.1
CSS0031330 Camellia sinensis var. sinensis HOM05D006393 ORTHO05D008088 4.3e-11 72.4 144 42.4
Nn8g39292 Nelumbo nucifera HOM05D006393 ORTHO05D008088 4.3e-11 72.4 143 44.1
Sp6g24450 Schrenkiella parvula HOM05D006393 ORTHO05D008088 5.6e-11 72.0 147 40.8
ATR0083G026 Amborella trichopoda HOM05D006393 ORTHO05D008088 7.3e-11 71.6 145 42.1
Atru.chr7.1280 Acer truncatum HOM05D006393 ORTHO05D008088 9.5e-11 71.2 144 43.1
BcaC04g19399 Brassica carinata HOM05D006393 ORTHO05D008088 9.5e-11 71.2 147 39.5
C09p56120 Brassica napus HOM05D006393 ORTHO05D008088 9.5e-11 71.2 147 39.5
BolC9t58479H Brassica oleracea HOM05D006393 ORTHO05D008088 9.5e-11 71.2 147 39.5
AUR62011040 Chenopodium quinoa HOM05D006393 ORTHO05D008088 9.5e-11 71.2 144 41.0
COL.COLO4_34948 Corchorus olitorius HOM05D006393 ORTHO05D008088 9.5e-11 71.2 144 43.1
Gohir.D06G058100 Gossypium hirsutum HOM05D006393 ORTHO05D008088 9.5e-11 71.2 145 42.8
Gorai.010G068300 Gossypium raimondii HOM05D006393 ORTHO05D008088 9.5e-11 71.2 145 42.8
CiPaw.03G236400 Carya illinoinensis HOM05D006393 ORTHO05D008088 1.2e-10 70.9 144 42.4
Ciclev10008889m.g Citrus clementina HOM05D006393 ORTHO05D008088 1.2e-10 70.9 143 42.7
PGR102G0276 Punica granatum HOM05D006393 ORTHO05D008088 1.2e-10 70.9 144 42.4
QL02p086364 Quercus lobata HOM05D006393 ORTHO05D008088 1.6e-10 70.5 144 41.0
THA.LOC104815111 Tarenaya hassleriana HOM05D006393 ORTHO05D008088 1.6e-10 70.5 147 40.1
BcaB08g36553 Brassica carinata HOM05D006393 ORTHO05D008088 2.1e-10 70.1 147 39.5
Carub.0006s1830 Capsella rubella HOM05D006393 ORTHO05D008088 2.1e-10 70.1 147 38.8
Gohir.A06G059900 Gossypium hirsutum HOM05D006393 ORTHO05D008088 2.1e-10 70.1 145 42.1
AL6G31460 Arabidopsis lyrata HOM05D006393 ORTHO05D008088 2.8e-10 69.7 147 39.5
Eucgr.C04142 Eucalyptus grandis HOM05D006393 ORTHO05D008088 3.6e-10 69.3 144 41.0
Sabra18G0063700 Salix brachista HOM05D006393 ORTHO05D008088 3.6e-10 69.3 142 39.4
Sed0023374 Sechium edule HOM05D006393 ORTHO05D008088 3.6e-10 69.3 142 41.5
MD02G1061500 Malus domestica HOM05D006393 ORTHO05D008088 4.7e-10 68.9 143 43.4
Potri.018G073000 Populus trichocarpa HOM05D006393 ORTHO05D008088 4.7e-10 68.9 144 41.0
AT5G19930 Arabidopsis thaliana HOM05D006393 ORTHO05D008088 6.1e-10 68.6 147 38.8
TWI34G1546 Tripterygium wilfordii HOM05D006393 ORTHO05D008088 6.1e-10 68.6 144 40.3
MBI04_g35350_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 1.0e-09 67.8 144 38.9
Thhalv10014278m.g Eutrema salsugineum HOM05D006393 ORTHO05D008088 1.4e-09 67.4 147 40.1
GSVIVG01015453001 Vitis vinifera HOM05D006393 ORTHO05D008088 2.3e-09 66.6 144 39.6
MELO3C025307.2 Cucumis melo HOM05D006393 ORTHO05D008088 3.1e-09 66.2 144 39.6
RcHm_v2.0_Chr2g0089771 Rosa chinensis HOM05D006393 ORTHO05D008088 3.1e-09 66.2 144 40.3
Sc07g0007380 Simmondsia chinensis HOM05D006393 ORTHO05D008088 3.1e-09 66.2 150 39.3
Zm00001eb122440 Zea mays HOM05D006393 ORTHO05D008088 3.1e-09 66.2 145 40.7
Oeu027539.2 Olea europaea HOM05D006393 ORTHO05D008088 4.0e-09 65.9 144 39.6
PSO782G0281 Papaver somniferum HOM05D006393 ORTHO05D008088 4.0e-09 65.9 144 38.9
HPP92_009792 Vanilla planifolia HOM05D006393 ORTHO05D008088 4.0e-09 65.9 144 35.4
Aqoxy7G01879 Aquilegia oxysepala HOM05D006393 ORTHO05D008088 5.2e-09 65.5 142 40.1
ClCG06G010490 Citrullus lanatus HOM05D006393 ORTHO05D008088 5.2e-09 65.5 144 38.2
Manes.16G064200 Manihot esculenta HOM05D006393 ORTHO05D008088 5.2e-09 65.5 144 39.6
Oeu046267.2 Olea europaea HOM05D006393 ORTHO05D008088 5.2e-09 65.5 147 38.8
FvH4_1g04221 Fragaria vesca HOM05D006393 ORTHO05D008088 6.8e-09 65.1 144 40.3
MBI01_g13571_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 6.8e-09 65.1 144 38.9
Ah.14g081310 Amaranthus hybridus HOM05D006393 ORTHO05D008088 8.9e-09 64.7 145 39.3
CDE06G0973 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 8.9e-09 64.7 146 36.3
CDE07G1479 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 8.9e-09 64.7 142 37.3
CsaV3_1G030940 Cucumis sativus L. HOM05D006393 ORTHO05D008088 1.5e-08 63.9 144 38.9
FAN23G0113 Fragaria x ananassa HOM05D006393 ORTHO05D008088 2.0e-08 63.5 142 38.0
EL10Ac8g18557 Beta vulgaris HOM05D006393 ORTHO05D008088 2.6e-08 63.2 145 40.0
CAN.G1665.6 Capsicum annuum HOM05D006393 ORTHO05D008088 2.6e-08 63.2 144 36.8
CARHR192920 Cardamine hirsuta HOM05D006393 ORTHO05D008088 2.6e-08 63.2 40 75.0
HanXRQChr03g0062141 Helianthus annuus HOM05D006393 ORTHO05D008088 3.4e-08 62.8 144 40.3
Hund09172 Selenicereus undatus HOM05D006393 ORTHO05D008088 4.4e-08 62.4 144 36.8
HPP92_008697 Vanilla planifolia HOM05D006393 ORTHO05D008088 4.4e-08 62.4 143 35.7
Os01g0178200 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 5.8e-08 62.0 158 36.1
Solyc10g079970.2 Solanum lycopersicum HOM05D006393 ORTHO05D008088 9.8e-08 61.2 142 35.9
Sopen10g030590 Solanum pennellii HOM05D006393 ORTHO05D008088 9.8e-08 61.2 142 35.9
DCAR_010438 Daucus carota HOM05D006393 ORTHO05D008088 1.3e-07 60.8 144 36.8
Lsat_1_v5_gn_7_42880 Lactuca sativa HOM05D006393 ORTHO05D008088 1.3e-07 60.8 142 34.5
SEGI_37175 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 1.7e-07 60.5 142 35.9
Zm00001eb106640 Zea mays HOM05D006393 ORTHO05D008088 1.7e-07 60.5 142 38.0
Psat4g042480 Pisum sativum HOM05D006393 ORTHO05D008088 2.2e-07 60.1 146 39.0
MSTRG.1197 Avicennia marina HOM05D006393 ORTHO05D008088 3.7e-07 59.3 144 38.2
Cc06_g09230 Coffea canephora HOM05D006393 ORTHO05D008088 3.7e-07 59.3 144 38.2
Nitab4.5_0002551g0020 Nicotiana tabacum HOM05D006393 ORTHO05D008088 3.7e-07 59.3 143 36.4
PGSC0003DMG401029823 Solanum tuberosum HOM05D006393 ORTHO05D008088 3.7e-07 59.3 144 35.4
unitig_37.g13035 Utricularia gibba HOM05D006393 ORTHO05D008088 4.9e-07 58.9 144 38.9
Os01g0507300 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 6.4e-07 58.5 142 37.3
SGA_v2.0_scaffold92G28235 Striga asiatica HOM05D006393 ORTHO05D008088 6.4e-07 58.5 41 68.3
arahy.Tifrunner.gnm1.ann1.3AE437 Arachis hypogaea HOM05D006393 ORTHO05D008088 8.3e-07 58.2 40 65.0
arahy.Tifrunner.gnm1.ann1.RZM4QH Arachis hypogaea HOM05D006393 ORTHO05D008088 8.3e-07 58.2 40 65.0
Nitab4.5_0010615g0010 Nicotiana tabacum HOM05D006393 ORTHO05D008088 8.3e-07 58.2 143 37.1
Medtr4g112990 Medicago truncatula HOM05D006393 ORTHO05D008088 1.1e-06 57.8 37 73.0
Lalb_Chr13g0302251 Lupinus albus HOM05D006393 ORTHO05D008088 1.4e-06 57.4 144 36.8
TAR636G2166 Trochodendron aralioides HOM05D006393 ORTHO05D008088 1.9e-06 57.0 36 72.2
Ca_21724_v3 Cicer arietinum L. HOM05D006393 ORTHO05D008088 2.4e-06 56.6 37 70.3
VMungo1215G0586 Vigna mungo HOM05D006393 ORTHO05D008088 2.4e-06 56.6 147 35.4
Migut.C00826 Erythranthe guttata HOM05D006393 ORTHO05D008088 3.2e-06 56.2 36 72.2
Peaxi162Scf00223g01425 Petunia axillaris HOM05D006393 ORTHO05D008088 3.2e-06 56.2 37 67.6
ECA240G0151 Erigeron canadensis HOM05D006393 ORTHO05D008088 4.1e-06 55.8 37 75.7
Hma1.2p1_0735F.1_g210560 Hydrangea macrophylla HOM05D000087 ORTHO05D000439 4.1e-06 55.8 50 54.0
Nitab4.5_0012137g0030 Nicotiana tabacum HOM05D000087 ORTHO05D000439 5.4e-06 55.5 50 52.0
Phvul.003G159300 Phaseolus vulgaris HOM05D006393 ORTHO05D008088 5.4e-06 55.5 40 62.5
Sopen06g027140 Solanum pennellii HOM05D000087 ORTHO05D000439 5.4e-06 55.5 50 56.0
Nitab4.5_0000269g0020 Nicotiana tabacum HOM05D000087 ORTHO05D000439 7.0e-06 55.1 50 54.0
SalBow7G4467 Salvia bowleyana HOM05D006393 ORTHO05D008088 7.0e-06 55.1 40 62.5
Atru.chr11.1797 Acer truncatum HOM05D000087 ORTHO05D000439 9.2e-06 54.7 50 50.0
Lsat_1_v5_gn_4_108320 Lactuca sativa HOM05D000087 ORTHO05D000439 9.2e-06 54.7 50 48.0
Pp3c12_24880 Physcomitrium patens HOM05D006393 ORTHO05D008088 9.2e-06 54.7 142 33.1
Zm00001eb342450 Zea mays HOM05D006393 ORTHO05D008088 9.2e-06 54.7 40 65.0


User provided reference genes

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