Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16476 Vaccinium macrocarpon HOM05D004191 ORTHO05D004887 3.9e-102 374.8 187 100.0
Rhsim12G0150700 Rhododendron simsii HOM05D004191 ORTHO05D004887 3.3e-101 371.7 187 98.4
ATR0609G026 Amborella trichopoda HOM05D004191 ORTHO05D004887 2.2e-97 359.0 187 92.5
Dinv40713 Davidia involucrata HOM05D004191 ORTHO05D004887 3.8e-97 358.2 187 94.1
GSVIVG01002004001 Vitis vinifera HOM05D004191 ORTHO05D004887 1.1e-96 356.7 187 92.0
CiPaw.12G126500 Carya illinoinensis HOM05D004191 ORTHO05D004887 1.4e-96 356.3 187 92.5
QL08p013180 Quercus lobata HOM05D004191 ORTHO05D004887 1.4e-96 356.3 186 91.9
CiPaw.11G184500 Carya illinoinensis HOM05D004191 ORTHO05D004887 1.9e-96 355.9 187 92.5
TAR371G0103 Trochodendron aralioides HOM05D004191 ORTHO05D004887 1.9e-96 355.9 187 92.0
MBI02_g10101_MAGBIO Magnolia biondii HOM05D004191 ORTHO05D004887 2.5e-96 355.5 187 90.9
Thecc.05G140700 Theobroma cacao HOM05D004191 ORTHO05D004887 2.5e-96 355.5 187 91.4
MD03G1210500 Malus domestica HOM05D004191 ORTHO05D004887 3.2e-96 355.1 187 90.9
Prupe.4G204700 Prunus persica HOM05D004191 ORTHO05D004887 3.2e-96 355.1 187 90.9
Duzib093G1201 Durio zibethinus HOM05D004191 ORTHO05D004887 4.2e-96 354.8 187 91.4
Lj3g0027602 Lotus japonicus HOM05D004191 ORTHO05D004887 5.5e-96 354.4 187 90.9
Potri.001G418400 Populus trichocarpa HOM05D004191 ORTHO05D004887 5.5e-96 354.4 187 92.5
Cc05_g13280 Coffea canephora HOM05D004191 ORTHO05D004887 7.1e-96 354.0 187 90.4
FvH4_3g21920 Fragaria vesca HOM05D004191 ORTHO05D004887 7.1e-96 354.0 187 90.4
FAN16G1028 Fragaria x ananassa HOM05D004191 ORTHO05D004887 7.1e-96 354.0 187 90.4
RcHm_v2.0_Chr5g0037731 Rosa chinensis HOM05D004191 ORTHO05D004887 7.1e-96 354.0 187 90.4
Sabra16G0284100 Salix brachista HOM05D004191 ORTHO05D004887 7.1e-96 354.0 187 92.0
Lalb_Chr19g0134771 Lupinus albus HOM05D004191 ORTHO05D004887 9.3e-96 353.6 187 90.9
MD11G1225200 Malus domestica HOM05D004191 ORTHO05D004887 9.3e-96 353.6 187 90.4
Lalb_Chr03g0030141 Lupinus albus HOM05D004191 ORTHO05D004887 1.2e-95 353.2 187 90.4
CSS0034391 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 1.6e-95 352.8 187 92.0
FAN21G0017 Fragaria x ananassa HOM05D004191 ORTHO05D004887 1.6e-95 352.8 187 89.8
Nitab4.5_0002838g0150 Nicotiana tabacum HOM05D004191 ORTHO05D004887 1.6e-95 352.8 187 91.4
SGA_v2.0_scaffold416G51230 Striga asiatica HOM05D004191 ORTHO05D004887 1.6e-95 352.8 187 91.4
FAN25G1832 Fragaria x ananassa HOM05D004191 ORTHO05D004887 2.1e-95 352.4 187 89.3
Lj1A865T18 Lonicera japonica HOM05D004191 ORTHO05D004887 2.1e-95 352.4 187 90.4
Nitab4.5_0005420g0050 Nicotiana tabacum HOM05D004191 ORTHO05D004887 2.1e-95 352.4 187 90.9
Oeu032442.1 Olea europaea HOM05D004191 ORTHO05D004887 2.1e-95 352.4 187 92.5
TAR626G0300 Trochodendron aralioides HOM05D004191 ORTHO05D004887 2.1e-95 352.4 187 90.4
CANSAT80G0944 Cannabis sativa HOM05D004191 ORTHO05D004887 2.7e-95 352.1 187 90.9
Manes.03G123300 Manihot esculenta HOM05D004191 ORTHO05D004887 2.7e-95 352.1 187 91.4
PSO675G8300 Papaver somniferum HOM05D004191 ORTHO05D004887 2.7e-95 352.1 187 89.8
Duzib106G0849 Durio zibethinus HOM05D004191 ORTHO05D004887 3.5e-95 351.7 187 90.4
Hma1.2p1_0049F.1_g028640 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 3.5e-95 351.7 185 93.5
Aqoxy4G00334 Aquilegia oxysepala HOM05D004191 ORTHO05D004887 4.6e-95 351.3 187 89.8
COL.COLO4_05062 Corchorus olitorius HOM05D004191 ORTHO05D004887 4.6e-95 351.3 187 90.4
arahy.Tifrunner.gnm1.ann1.HY89VY Arachis hypogaea HOM05D004191 ORTHO05D004887 1.0e-94 350.1 187 89.3
Gohir.A09G118400 Gossypium hirsutum HOM05D004191 ORTHO05D004887 1.0e-94 350.1 187 89.8
Gohir.D09G115300 Gossypium hirsutum HOM05D004191 ORTHO05D004887 1.0e-94 350.1 187 89.8
Gorai.006G132900 Gossypium raimondii HOM05D004191 ORTHO05D004887 1.0e-94 350.1 187 89.8
SalBow7G2717 Salvia bowleyana HOM05D004191 ORTHO05D004887 1.0e-94 350.1 187 90.9
PGSC0003DMG400005405 Solanum tuberosum HOM05D004191 ORTHO05D004887 1.0e-94 350.1 187 89.8
HanXRQChr02g0054141 Helianthus annuus HOM05D004191 ORTHO05D004887 1.3e-94 349.7 187 90.4
Cpa.g.sc97.62 Carica papaya HOM05D004191 ORTHO05D004887 1.8e-94 349.4 187 88.8
ECA236G4841 Erigeron canadensis HOM05D004191 ORTHO05D004887 1.8e-94 349.4 187 89.3
arahy.Tifrunner.gnm1.ann1.B9KZG1 Arachis hypogaea HOM05D004191 ORTHO05D004887 2.3e-94 349.0 187 89.3
CSS0028201 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 2.3e-94 349.0 187 91.4
PGR031G0276 Punica granatum HOM05D004191 ORTHO05D004887 2.3e-94 349.0 184 90.8
Solyc10g006490.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 2.3e-94 349.0 187 89.8
Ca_18852_v3 Cicer arietinum L. HOM05D004191 ORTHO05D004887 3.0e-94 348.6 187 89.3
Migut.H01854 Erythranthe guttata HOM05D004191 ORTHO05D004887 3.0e-94 348.6 187 90.4
Oeu007633.1 Olea europaea HOM05D004191 ORTHO05D004887 3.0e-94 348.6 196 88.8
Lsat_1_v5_gn_7_108481 Lactuca sativa HOM05D004191 ORTHO05D004887 5.1e-94 347.8 187 89.3
Peaxi162Scf00082g00016 Petunia axillaris HOM05D004191 ORTHO05D004887 5.1e-94 347.8 187 89.3
ATR0109G002 Amborella trichopoda HOM05D004191 ORTHO05D004887 6.7e-94 347.4 187 89.8
Ciclev10009626m.g Citrus clementina HOM05D004191 ORTHO05D004887 6.7e-94 347.4 187 88.8
Phvul.011G139700 Phaseolus vulgaris HOM05D004191 ORTHO05D004887 6.7e-94 347.4 187 89.3
THA.LOC104799884 Tarenaya hassleriana HOM05D004191 ORTHO05D004887 8.7e-94 347.1 187 89.3
VMungo1127G0852 Vigna mungo HOM05D004191 ORTHO05D004887 8.7e-94 347.1 187 88.8
MSTRG.6892 Avicennia marina HOM05D004191 ORTHO05D004887 1.1e-93 346.7 187 89.3
Actinidia34670 Actinidia chinensis HOM05D004191 ORTHO05D004887 1.5e-93 346.3 187 90.4
Eucgr.F03430 Eucalyptus grandis HOM05D004191 ORTHO05D004887 1.5e-93 346.3 182 91.2
PSO170G1932 Papaver somniferum HOM05D004191 ORTHO05D004887 1.5e-93 346.3 187 88.8
Glyma.06G269400 Glycine max HOM05D004191 ORTHO05D004887 1.9e-93 345.9 187 88.8
Glyma.12G135200 Glycine max HOM05D004191 ORTHO05D004887 1.9e-93 345.9 187 88.8
Solyc01g096530.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 1.9e-93 345.9 187 88.8
Sopen01g040260 Solanum pennellii HOM05D004191 ORTHO05D004887 1.9e-93 345.9 187 89.3
CAN.G134.12 Capsicum annuum HOM05D004191 ORTHO05D004887 2.5e-93 345.5 187 89.3
FAN11G1314 Fragaria x ananassa HOM05D004191 ORTHO05D004887 4.3e-93 344.7 200 84.5
HPP92_013205 Vanilla planifolia HOM05D001003 ORTHO05D004887 4.3e-93 344.7 186 88.2
Hund11592 Selenicereus undatus HOM05D004191 ORTHO05D004887 5.7e-93 344.4 187 88.2
AL8G30180 Arabidopsis lyrata HOM05D004191 ORTHO05D004887 1.3e-92 343.2 187 88.2
SGA_v2.0_scaffold24G10288 Striga asiatica HOM05D004191 ORTHO05D004887 1.6e-92 342.8 187 88.8
Medtr4g081170 Medicago truncatula HOM05D004191 ORTHO05D004887 2.8e-92 342.0 187 87.7
AT5G54750 Arabidopsis thaliana HOM05D004191 ORTHO05D004887 3.7e-92 341.7 187 87.2
TWI39G0061 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 3.7e-92 341.7 187 87.7
Carub.0008s1502 Capsella rubella HOM05D004191 ORTHO05D004887 4.8e-92 341.3 187 87.2
TPR.G25893 Trifolium pratense HOM05D004191 ORTHO05D004887 4.8e-92 341.3 187 87.7
CARHR268090 Cardamine hirsuta HOM05D004191 ORTHO05D004887 6.2e-92 340.9 187 86.6
TPR.G24299 Trifolium pratense HOM05D004191 ORTHO05D004887 8.2e-92 340.5 186 87.6
MSTRG.12958 Avicennia marina HOM05D004191 ORTHO05D004887 1.1e-91 340.1 187 87.7
CAN.G1110.10 Capsicum annuum HOM05D004191 ORTHO05D004887 1.1e-91 340.1 201 84.1
Thhalv10019192m.g Eutrema salsugineum HOM05D004191 ORTHO05D004887 1.1e-91 340.1 187 86.6
Ah.02g116780 Amaranthus hybridus HOM05D004191 ORTHO05D004887 1.4e-91 339.7 187 86.1
CDE02G0163 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 1.8e-91 339.3 187 86.1
SpUn0117_0020 Schrenkiella parvula HOM05D004191 ORTHO05D004887 1.8e-91 339.3 187 86.6
Aa31LG3G10650 Aethionema arabicum HOM05D004191 ORTHO05D004887 2.4e-91 339.0 187 86.1
BcaB07g31034 Brassica carinata HOM05D004191 ORTHO05D004887 4.1e-91 338.2 187 86.1
A09p20070 Brassica napus HOM05D004191 ORTHO05D004887 4.1e-91 338.2 187 86.1
C09p25460 Brassica napus HOM05D004191 ORTHO05D004887 4.1e-91 338.2 187 86.1
BraA09t37620Z Brassica rapa HOM05D004191 ORTHO05D004887 4.1e-91 338.2 187 86.1
Zm00001eb067130 Zea mays HOM05D004191 ORTHO05D004887 4.1e-91 338.2 185 87.0
Migut.M01809 Erythranthe guttata HOM05D004191 ORTHO05D004887 5.3e-91 337.8 181 89.0
Sed0000628 Sechium edule HOM05D004191 ORTHO05D004887 5.3e-91 337.8 187 85.6
Zm00001eb433090 Zea mays HOM05D004191 ORTHO05D004887 5.3e-91 337.8 185 86.5
EL10Ac5g13057 Beta vulgaris HOM05D004191 ORTHO05D004887 6.9e-91 337.4 187 85.0
MELO3C018102.2 Cucumis melo HOM05D004191 ORTHO05D004887 6.9e-91 337.4 187 86.6
CsaV3_3G023130 Cucumis sativus L. HOM05D004191 ORTHO05D004887 6.9e-91 337.4 187 86.6
Sp4g10480 Schrenkiella parvula HOM05D004191 ORTHO05D004887 1.2e-90 336.7 187 85.6
PSO782G4612 Papaver somniferum HOM05D004191 ORTHO05D004887 2.0e-90 335.9 203 81.8
Sopen10g002440 Solanum pennellii HOM05D004191 ORTHO05D004887 2.0e-90 335.9 206 81.1
Sc15g0001730 Simmondsia chinensis HOM05D004191 ORTHO05D004887 2.6e-90 335.5 187 87.2
Sc22g0000820 Simmondsia chinensis HOM05D004191 ORTHO05D004887 3.4e-90 335.1 187 85.6
Eucgr.F00980 Eucalyptus grandis HOM05D004191 ORTHO05D004887 4.5e-90 334.7 187 85.0
Os03g0402000 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 5.8e-90 334.3 182 87.4
Os07g0642300 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 5.8e-90 334.3 182 87.4
Medtr8g027700 Medicago truncatula HOM05D004191 ORTHO05D004887 7.6e-90 334.0 187 85.6
PGR083G1136 Punica granatum HOM05D004191 ORTHO05D004887 1.3e-89 333.2 193 83.9
Sed0012224 Sechium edule HOM05D004191 ORTHO05D004887 3.8e-89 331.6 187 84.0
arahy.Tifrunner.gnm1.ann1.T6DWBF Arachis hypogaea HOM05D004191 ORTHO05D004887 6.5e-89 330.9 187 85.0
unitig_0.g2386 Utricularia gibba HOM05D004191 ORTHO05D004887 2.5e-88 328.9 183 87.4
BolC9t55449H Brassica oleracea HOM05D004191 ORTHO05D004887 9.3e-88 327.0 206 78.6
TWI38G1569 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 1.6e-87 326.2 208 77.9
Manes.15G076000 Manihot esculenta HOM05D004191 ORTHO05D004887 1.1e-85 320.1 186 81.7
Lsat_1_v5_gn_5_5821 Lactuca sativa HOM05D004191 ORTHO05D004887 5.7e-85 317.8 173 87.3
ClCG05G014740 Citrullus lanatus HOM05D004191 ORTHO05D004887 2.8e-84 315.5 241 67.6
Hund24114 Selenicereus undatus HOM05D004191 ORTHO05D004887 3.7e-84 315.1 211 75.4
Nn1g08677 Nelumbo nucifera HOM05D004191 ORTHO05D004887 6.3e-84 314.3 167 88.6
Mapoly0006s0106 Marchantia polymorpha HOM05D004191 ORTHO05D004887 2.6e-82 308.9 185 77.8
Eucgr.F00978 Eucalyptus grandis HOM05D004191 ORTHO05D004887 4.2e-80 301.6 168 85.1
AagrBONN_evm.TU.Sc2ySwM_344.5600 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.2e-79 300.1 187 74.3
AagrBONN_evm.TU.Sc2ySwM_344.5601 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.2e-79 300.1 187 74.3
SMO165G0074 Selaginella moellendorffii HOM05D004191 ORTHO05D004887 3.6e-79 298.5 187 73.8
AagrBONN_evm.TU.Sc2ySwM_362.1587 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.4e-78 296.6 187 73.8
Peaxi162Scf01434g00020 Petunia axillaris HOM05D004191 ORTHO05D004887 6.7e-78 294.3 187 79.1
Hma1.2p1_0774F.1_g216345 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 3.3e-77 292.0 158 91.1
Nitab4.5_0002342g0090 Nicotiana tabacum HOM05D004191 ORTHO05D004887 7.4e-77 290.8 187 77.0
CBR_g9060 Chara braunii HOM05D004191 ORTHO05D004887 2.8e-76 288.9 187 72.7
Dinv22301 Davidia involucrata HOM05D004191 ORTHO05D004887 4.8e-76 288.1 149 95.3
AagrBONN_evm.TU.Sc2ySwM_344.5599 Anthoceros agrestis HOM05D004191 ORTHO05D004887 6.3e-76 287.7 172 76.2
Nitab4.5_0002229g0200 Nicotiana tabacum HOM05D004191 ORTHO05D004887 1.8e-75 286.2 187 76.5
Pp3c6_29730 Physcomitrium patens HOM05D004191 ORTHO05D004887 9.1e-75 283.9 180 74.4
BcaC04g21960 Brassica carinata HOM05D004191 ORTHO05D004887 1.5e-74 283.1 154 87.7
BcaB07g30600 Brassica carinata HOM05D004191 ORTHO05D004887 4.5e-74 281.6 186 75.8
arahy.Tifrunner.gnm1.ann1.N3PQ25 Arachis hypogaea HOM05D004191 ORTHO05D004887 1.3e-73 280.0 187 74.9
Peaxi162Scf01475g00001 Petunia axillaris HOM05D004191 ORTHO05D004887 7.9e-71 270.8 187 74.3
AUR62039960 Chenopodium quinoa HOM05D004191 ORTHO05D004887 2.3e-70 269.2 148 86.5
Cpa.g.sc2.173 Carica papaya HOM05D004191 ORTHO05D004887 5.7e-69 264.6 214 62.1
AUR62007507 Chenopodium quinoa HOM05D004191 ORTHO05D004887 6.5e-65 251.1 158 75.3
Peaxi162Scf08257g00003 Petunia axillaris HOM05D004191 ORTHO05D004887 1.6e-63 246.5 187 69.0
Cre03.g145607 Chlamydomonas reinhardtii HOM05D004191 ORTHO05D004887 2.6e-61 239.2 173 62.4
PGSC0003DMG400029125 Solanum tuberosum HOM05D004191 ORTHO05D004887 7.5e-61 237.7 187 65.8
Sp2g07630 Schrenkiella parvula HOM05D004191 ORTHO05D004887 7.7e-58 227.6 124 88.7
AagrBONN_evm.TU.Sc2ySwM_362.1580 Anthoceros agrestis HOM05D004191 ORTHO05D004887 8.8e-54 214.2 133 75.2
Cfa020410 Carpinus fangiana HOM05D004191 ORTHO05D004887 9.1e-51 204.1 103 92.2
PRCOL_00004686 Prasinoderma coloniale HOM05D004191 ORTHO05D004887 5.0e-49 198.4 167 54.5
CDE05G2537 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 2.5e-48 196.1 107 88.8
Psat7g161320 Pisum sativum HOM05D004191 ORTHO05D004887 4.7e-47 191.8 139 69.1
COL.COLO4_37956 Corchorus olitorius HOM05D004191 ORTHO05D004887 8.0e-47 191.0 98 87.8
MCO14G457 Micromonas commoda HOM05D004191 ORTHO05D004887 1.8e-46 189.9 175 52.6
TWI38G1856 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 4.4e-45 185.3 103 81.6
AUR62030012 Chenopodium quinoa HOM05D004191 ORTHO05D004887 3.7e-44 182.2 181 56.9
SEGI_28528 Sequoiadendron giganteum HOM05D004191 ORTHO05D004887 1.4e-43 180.3 98 83.7
Nn5g28123 Nelumbo nucifera HOM05D004191 ORTHO05D004887 2.0e-37 159.8 85 90.6
HanXRQChr11g0332951 Helianthus annuus HOM05D004191 ORTHO05D004887 1.5e-29 133.7 142 54.2
Pp3c2_32190 Physcomitrium patens HOM05D004191 ORTHO05D004887 1.3e-20 104.0 68 69.1
COL.COLO4_37955 Corchorus olitorius HOM05D004191 ORTHO05D004887 7.1e-19 98.2 52 96.2
Cfa020409 Carpinus fangiana HOM05D004191 ORTHO05D004887 4.6e-18 95.5 52 90.4
Haze_09622 Corylus avellana HOM05D004191 ORTHO05D004887 1.5e-16 90.5 49 91.8
Haze_09618 Corylus avellana HOM05D004191 ORTHO05D004887 1.5e-13 80.5 45 86.7
Rhsim01G0090000 Rhododendron simsii HOM05D004191 ORTHO05D004887 1.5e-13 80.5 70 65.7
Actinidia19733 Actinidia chinensis HOM05D004191 ORTHO05D004887 4.4e-13 79.0 41 87.8
Medtr4g027400 Medicago truncatula HOM05D004191 ORTHO05D004887 7.6e-13 78.2 47 80.9
Ah.12g056770 Amaranthus hybridus HOM05D004191 ORTHO05D004887 6.4e-12 75.1 68 54.4
Ah.07g199550 Amaranthus hybridus HOM05D004191 ORTHO05D004887 1.9e-11 73.6 41 80.5
Ah.07g199480 Amaranthus hybridus HOM05D004191 ORTHO05D060174 2.1e-10 70.1 39 76.9


User provided reference genes

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