Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16450 Vaccinium macrocarpon HOM05D010627 ORTHO05D009599 2.3e-49 198.7 111 100.0
Rhsim12G0143600 Rhododendron simsii HOM05D007913 ORTHO05D009599 3.1e-22 108.6 86 75.6
CSS0025071 Camellia sinensis var. sinensis HOM05D007913 ORTHO05D009599 5.5e-19 97.8 90 64.4
Actinidia35085 Actinidia chinensis HOM05D010627 ORTHO05D013125 5.7e-16 87.8 117 56.4
Actinidia18937 Actinidia chinensis HOM05D010627 ORTHO05D009599 9.7e-16 87.0 119 53.8
Dinv09801 Davidia involucrata HOM05D007913 ORTHO05D009599 1.2e-13 80.1 75 61.3
Hma1.2p1_1001F.1_g246480 Hydrangea macrophylla HOM05D007913 ORTHO05D009599 2.9e-12 75.5 77 57.1
Rhsim12G0143700 Rhododendron simsii HOM05D001813 ORTHO05D009599 1.1e-11 73.6 70 65.7
Manes.01G012300 Manihot esculenta HOM05D021252 ORTHO05D012395 2.3e-09 65.9 123 42.3
TAR371G0046 Trochodendron aralioides HOM05D007913 ORTHO05D009599 2.3e-09 65.9 118 42.4
TAR629G2111 Trochodendron aralioides HOM05D007913 ORTHO05D009599 3.9e-09 65.1 115 45.2
Actinidia35084 Actinidia chinensis HOM05D006108 ORTHO05D007605 5.1e-09 64.7 104 49.0
Manes.05G137750 Manihot esculenta HOM05D021252 ORTHO05D012395 5.1e-09 64.7 120 40.0
Nitab4.5_0004841g0020 Nicotiana tabacum HOM05D010627 ORTHO05D013125 6.7e-09 64.3 116 46.6
Nitab4.5_0005886g0020 Nicotiana tabacum HOM05D010627 ORTHO05D013125 3.3e-08 62.0 115 46.1
Ciclev10033117m.g Citrus clementina HOM05D013794 ORTHO05D009599 5.7e-08 61.2 107 41.1
MSTRG.832 Avicennia marina HOM05D007913 ORTHO05D009599 7.4e-08 60.8 107 43.9
Migut.E00331 Erythranthe guttata HOM05D007913 ORTHO05D009599 7.4e-08 60.8 111 44.1
Migut.E00332 Erythranthe guttata HOM05D007913 ORTHO05D009599 1.3e-07 60.1 111 42.3
Hma1.2p1_0061F.1_g034050 Hydrangea macrophylla HOM05D007913 ORTHO05D009599 1.3e-07 60.1 112 42.0
MSTRG.4515 Avicennia marina HOM05D019774 ORTHO05D018531 1.7e-07 59.7 76 48.7
Peaxi162Scf00634g00013 Petunia axillaris HOM05D010627 ORTHO05D013125 1.7e-07 59.7 115 45.2
Haze_06128 Corylus avellana HOM05D003281 ORTHO05D004128 2.2e-07 59.3 117 46.2
Dinv04476 Davidia involucrata HOM05D007913 ORTHO05D009599 2.2e-07 59.3 108 42.6
Dinv28091 Davidia involucrata HOM05D007913 ORTHO05D009599 2.2e-07 59.3 90 53.3
MSTRG.13523 Avicennia marina HOM05D007913 ORTHO05D009599 2.8e-07 58.9 104 39.4
Oeu006381.1 Olea europaea HOM05D010627 ORTHO05D013125 2.8e-07 58.9 76 47.4
TAR374G0796 Trochodendron aralioides HOM05D007913 ORTHO05D009599 2.8e-07 58.9 113 41.6
Oeu009783.1 Olea europaea HOM05D007913 ORTHO05D009599 6.3e-07 57.8 110 39.1
PGSC0003DMG400005762 Solanum tuberosum HOM05D010627 ORTHO05D013125 8.2e-07 57.4 105 48.6
MSTRG.13526 Avicennia marina HOM05D007913 ORTHO05D009599 1.1e-06 57.0 106 38.7
Nitab4.5_0000874g0170 Nicotiana tabacum HOM05D007913 ORTHO05D009599 1.1e-06 57.0 117 42.7
Sabra08G0090900 Salix brachista HOM05D013794 ORTHO05D009599 1.4e-06 56.6 114 38.6
Eucgr.G02329 Eucalyptus grandis HOM05D007913 ORTHO05D009599 2.4e-06 55.8 115 40.9
Solyc03g119600.1 Solanum lycopersicum HOM05D010627 ORTHO05D013125 4.1e-06 55.1 105 41.0
Sopen05g005290 Solanum pennellii HOM05D007913 ORTHO05D009599 4.1e-06 55.1 120 42.5
Actinidia14885 Actinidia chinensis HOM05D007913 ORTHO05D009599 6.9e-06 54.3 118 40.7
Phvul.003G035300 Phaseolus vulgaris HOM05D019736 ORTHO05D022774 6.9e-06 54.3 97 38.1
Duzib248G0949 Durio zibethinus HOM05D013794 ORTHO05D009599 9.1e-06 53.9 80 45.0
QL01p043366 Quercus lobata HOM05D007913 ORTHO05D009599 9.1e-06 53.9 112 46.4
PGSC0003DMG400014558 Solanum tuberosum HOM05D007913 ORTHO05D009599 9.1e-06 53.9 118 41.5


User provided reference genes

Program Settings