Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16445 Vaccinium macrocarpon HOM05D001090 ORTHO05D008663 0.0e+00 2282.7 1127 100.0
Rhsim11G0070600 Rhododendron simsii HOM05D001090 ORTHO05D008663 0.0e+00 1257.3 996 67.8
CSS0021561 Camellia sinensis var. sinensis HOM05D001090 ORTHO05D008663 0.0e+00 1140.2 1012 60.4
Actinidia29485 Actinidia chinensis HOM05D001090 ORTHO05D008663 0.0e+00 1088.6 1016 58.6
Dinv14668 Davidia involucrata HOM05D001090 ORTHO05D008663 3.3e-273 945.7 1019 52.1
Actinidia03422 Actinidia chinensis HOM05D001090 ORTHO05D008663 2.9e-261 906.0 1012 52.6
Lj7C349G17 Lonicera japonica HOM05D001090 ORTHO05D002687 2.2e-240 836.6 1018 49.0
Hma1.2p1_1129F.1_g259860 Hydrangea macrophylla HOM05D001090 ORTHO05D008663 2.5e-236 823.2 1022 47.8
Lj7A347T47 Lonicera japonica HOM05D001090 ORTHO05D008663 2.3e-226 790.0 830 54.8
DCAR_018875 Daucus carota HOM05D001090 ORTHO05D008663 3.9e-213 746.1 1012 42.5
Cfa018121 Carpinus fangiana HOM05D001090 ORTHO05D008663 2.5e-204 716.8 1022 43.9
QL09p032725 Quercus lobata HOM05D001090 ORTHO05D008663 9.0e-202 708.4 1003 44.7
Atru.chr13.1551 Acer truncatum HOM05D001090 ORTHO05D008663 6.7e-197 692.2 1003 43.1
Lsat_1_v5_gn_1_9840 Lactuca sativa HOM05D001090 ORTHO05D008663 2.5e-196 690.3 1013 43.0
Ciclev10000294m.g Citrus clementina HOM05D001090 ORTHO05D008663 2.1e-195 687.2 1004 43.4
Potri.019G066500 Populus trichocarpa HOM05D001090 ORTHO05D008663 2.8e-195 686.8 1015 43.2
Prupe.1G490500 Prunus persica HOM05D001090 ORTHO05D008663 5.8e-193 679.1 1012 42.2
Aqoxy6G00325 Aquilegia oxysepala HOM05D001090 ORTHO05D008663 1.7e-192 677.6 1016 41.7
Nn1g08979 Nelumbo nucifera HOM05D001090 ORTHO05D008663 1.1e-191 674.9 1031 42.1
FAN20G0562 Fragaria x ananassa HOM05D001090 ORTHO05D002687 2.1e-190 670.6 1000 42.7
PGSC0003DMG401006052 Solanum tuberosum HOM05D001090 ORTHO05D008663 2.3e-189 667.2 1012 40.8
TWI32G0149 Tripterygium wilfordii HOM05D001090 ORTHO05D002687 2.3e-189 667.2 1001 42.4
FvH4_2g27740 Fragaria vesca HOM05D001090 ORTHO05D008663 8.7e-189 665.2 1002 42.1
Oeu021884.2 Olea europaea HOM05D001090 ORTHO05D008663 4.3e-188 662.9 1039 39.7
FAN24G1236 Fragaria x ananassa HOM05D001090 ORTHO05D002687 4.8e-187 659.4 996 42.0
RcHm_v2.0_Chr6g0296591 Rosa chinensis HOM05D001090 ORTHO05D008663 4.8e-187 659.4 1010 42.4
CANSAT56G3793 Cannabis sativa HOM05D001090 ORTHO05D008663 1.1e-186 658.3 1010 41.9
CiPaw.15G032400 Carya illinoinensis HOM05D001090 ORTHO05D008663 1.1e-186 658.3 1015 41.7
Sopen11g001050 Solanum pennellii HOM05D001090 ORTHO05D008663 2.4e-186 657.1 1016 40.4
FAN15G0022 Fragaria x ananassa HOM05D001090 ORTHO05D002687 3.1e-186 656.8 1004 42.2
Solyc11g005030.3 Solanum lycopersicum HOM05D001090 ORTHO05D008663 6.9e-186 655.6 1011 40.3
MSTRG.25363 Avicennia marina HOM05D001090 ORTHO05D008663 2.0e-185 654.1 1021 40.4
Manes.18G082000 Manihot esculenta HOM05D001090 ORTHO05D008663 1.3e-184 651.4 1006 41.4
FAN27G1391 Fragaria x ananassa HOM05D001090 ORTHO05D002687 5.0e-184 649.4 994 41.9
Sabra19G0078400 Salix brachista HOM05D001090 ORTHO05D008663 1.4e-183 647.9 1022 41.4
Lj1g0016545 Lotus japonicus HOM05D001090 ORTHO05D008663 2.1e-182 644.0 1016 40.7
TWI34G0871 Tripterygium wilfordii HOM05D001090 ORTHO05D008663 6.1e-182 642.5 1002 40.7
MBI03_g28477_MAGBIO Magnolia biondii HOM05D001090 ORTHO05D008663 1.1e-180 638.3 1036 38.7
Nitab4.5_0002045g0020 Nicotiana tabacum HOM05D001090 ORTHO05D008663 1.6e-179 634.4 1026 38.2
Glyma.06G116800 Glycine max HOM05D001090 ORTHO05D008663 8.2e-179 632.1 1014 40.1
Duzib041G0130 Durio zibethinus HOM05D001090 ORTHO05D008663 5.3e-178 629.4 1006 41.0
Hund17320 Selenicereus undatus HOM05D001090 ORTHO05D008663 6.9e-178 629.0 1001 40.5
Gorai.005G088100 Gossypium raimondii HOM05D001090 ORTHO05D008663 7.7e-177 625.5 1003 40.5
Phvul.009G129300 Phaseolus vulgaris HOM05D001090 ORTHO05D008663 1.0e-176 625.2 1022 40.2
Lalb_Chr08g0241151 Lupinus albus HOM05D001090 ORTHO05D008663 2.9e-176 623.6 1013 40.7
Thecc.08G132300 Theobroma cacao HOM05D001090 ORTHO05D008663 5.0e-176 622.9 1008 40.3
SalBow7G3826 Salvia bowleyana HOM05D001090 ORTHO05D008663 5.5e-175 619.4 1026 39.7
Peaxi162Scf01003g00015 Petunia axillaris HOM05D001090 ORTHO05D008663 9.4e-175 618.6 1010 37.5
SalBow7G3344 Salvia bowleyana HOM05D001090 ORTHO05D008663 9.4e-175 618.6 1020 39.6
GSVIVG01008814001 Vitis vinifera HOM05D001090 ORTHO05D008663 3.6e-174 616.7 857 46.1
COL.COLO4_05689 Corchorus olitorius HOM05D001090 ORTHO05D008663 1.8e-173 614.4 1007 40.1
Sc15g0007530 Simmondsia chinensis HOM05D001090 ORTHO05D008663 3.9e-173 613.2 1028 39.3
VMungo1309G2387 Vigna mungo HOM05D001090 ORTHO05D008663 5.1e-173 612.8 1021 40.1
PSO017G6856 Papaver somniferum HOM05D001090 ORTHO05D008663 6.7e-173 612.5 1058 38.1
Cpa.g.sc64.146 Carica papaya HOM05D001090 ORTHO05D008663 8.8e-173 612.1 1004 38.6
HanXRQChr02g0041931 Helianthus annuus HOM05D001090 ORTHO05D008663 1.7e-171 607.8 1006 40.1
Gohir.D02G078900 Gossypium hirsutum HOM05D001090 ORTHO05D008663 8.2e-171 605.5 913 41.4
arahy.Tifrunner.gnm1.ann1.NR7S6L Arachis hypogaea HOM05D001090 ORTHO05D008663 1.4e-170 604.7 1024 39.1
EL10Ac7g17319 Beta vulgaris HOM05D001090 ORTHO05D008663 1.8e-170 604.4 1015 39.9
ECA238G2411 Erigeron canadensis HOM05D001090 ORTHO05D008663 6.9e-170 602.4 1011 38.4
arahy.Tifrunner.gnm1.ann1.FIZF7Q Arachis hypogaea HOM05D001090 ORTHO05D008663 8.5e-168 595.5 1023 38.6
Gohir.A02G071600 Gossypium hirsutum HOM05D001090 ORTHO05D008663 4.7e-166 589.7 915 40.4
Migut.C01061 Erythranthe guttata HOM05D001090 ORTHO05D008663 1.8e-165 587.8 1021 37.2
THA.LOC104813679 Tarenaya hassleriana HOM05D001090 ORTHO05D008663 5.1e-165 586.3 1006 39.1
Nitab4.5_0001168g0020 Nicotiana tabacum HOM05D001090 ORTHO05D008663 2.6e-164 583.9 1018 35.6
MELO3C002690.2 Cucumis melo HOM05D001090 ORTHO05D008663 1.8e-162 577.8 1015 39.0
CsaV3_1G032930 Cucumis sativus L. HOM05D001090 ORTHO05D008663 1.1e-159 568.5 1018 38.3
PSO170G6226 Papaver somniferum HOM05D001090 ORTHO05D008663 1.4e-157 561.6 1049 37.8
Thhalv10006535m.g Eutrema salsugineum HOM05D001090 ORTHO05D002687 5.7e-156 556.2 1014 37.4
CARHR022000 Cardamine hirsuta HOM05D001090 ORTHO05D002687 7.4e-156 555.8 1006 37.6
AL1G34800 Arabidopsis lyrata HOM05D001090 ORTHO05D008663 3.7e-155 553.5 1012 37.5
A06p17720 Brassica napus HOM05D001090 ORTHO05D008663 3.1e-154 550.4 1034 37.8
BcaB07g32158 Brassica carinata HOM05D001090 ORTHO05D008663 5.3e-154 549.7 1021 37.4
BraA06t24864Z Brassica rapa HOM05D001090 ORTHO05D008663 1.6e-153 548.1 1036 37.6
Ah.15g092020 Amaranthus hybridus HOM05D001090 ORTHO05D008663 3.5e-153 547.0 1011 37.4
AT1G21651 Arabidopsis thaliana HOM05D001090 ORTHO05D008663 5.9e-153 546.2 1010 36.6
AT1G21650 Arabidopsis thaliana HOM05D001090 ORTHO05D002687 2.2e-152 544.3 1008 36.6
C05p20620 Brassica napus HOM05D001090 ORTHO05D008663 2.1e-150 537.7 1012 37.8
BolC5t30760H Brassica oleracea HOM05D001090 ORTHO05D008663 2.1e-150 537.7 1012 37.8
BcaC05g26082 Brassica carinata HOM05D001090 ORTHO05D008663 8.0e-150 535.8 1016 37.8
Hma1.2p1_0014F.1_g010110 Hydrangea macrophylla HOM05D001090 ORTHO05D008663 1.5e-148 531.6 590 49.0
Carub.0001s2108 Capsella rubella HOM05D001090 ORTHO05D008663 2.0e-148 531.2 1011 37.0
Sed0003425 Sechium edule HOM05D001090 ORTHO05D008663 6.3e-147 526.2 840 41.7
SGA_v2.0_scaffold24G10429 Striga asiatica HOM05D001090 ORTHO05D008663 3.3e-135 487.3 1010 33.9
AUR62040524 Chenopodium quinoa HOM05D001090 ORTHO05D008663 9.8e-132 475.7 940 36.9
Eucgr.F03832 Eucalyptus grandis HOM05D001090 ORTHO05D008663 2.4e-130 471.1 828 36.2
Psat5g085040 Pisum sativum HOM05D001090 ORTHO05D008663 5.0e-128 463.4 998 35.0
Aa31LG7G5630 Aethionema arabicum HOM05D001090 ORTHO05D008663 3.3e-127 460.7 1006 35.4
unitig_0.g2283 Utricularia gibba HOM05D001090 ORTHO05D008663 5.2e-117 426.8 1009 31.8
ATR0584G005 Amborella trichopoda HOM05D001090 ORTHO05D008663 4.1e-114 417.2 1020 32.8
Sp1g19180 Schrenkiella parvula HOM05D001090 ORTHO05D008663 2.7e-113 414.5 827 36.3
HPP92_013748 Vanilla planifolia HOM05D001090 ORTHO05D008663 1.5e-111 408.7 1023 31.6
TPR.G13463 Trifolium pratense HOM05D001090 ORTHO05D008663 3.4e-108 397.5 769 36.9
Ca_16603_v3 Cicer arietinum L. HOM05D001090 ORTHO05D008663 1.3e-99 369.0 593 38.6
Medtr3g088535 Medicago truncatula HOM05D001090 ORTHO05D008663 2.0e-92 345.1 590 38.1
Cc10_g12630 Coffea canephora HOM05D001090 ORTHO05D008663 7.9e-89 333.2 609 35.5
Zm00001eb337940 Zea mays HOM05D001090 ORTHO05D008663 1.4e-85 322.4 774 30.7
Os05g0422300 Oryza sativa ssp. japonica HOM05D001090 ORTHO05D008663 3.5e-81 307.8 771 29.8
SHI09188 Sapria himalayana HOM05D001090 ORTHO05D008663 1.1e-79 302.8 612 35.6
SEGI_33865 Sequoiadendron giganteum HOM05D001090 ORTHO05D008663 5.5e-74 283.9 809 29.3
CAN.G342.10 Capsicum annuum HOM05D001090 ORTHO05D008663 6.0e-73 280.4 593 32.4
SHI09187 Sapria himalayana HOM05D001090 ORTHO05D008663 6.3e-70 270.4 425 41.9
Medtr3g088545 Medicago truncatula HOM05D001090 ORTHO05D008663 7.2e-66 256.9 426 40.8
CDE02G2378 Ceratophyllum demersum HOM05D001090 ORTHO05D008663 6.5e-59 233.8 453 36.2
Ca_16604_v3 Cicer arietinum L. HOM05D001090 ORTHO05D002687 6.7e-56 223.8 340 42.6
Pp3c14_11620 Physcomitrium patens HOM05D001090 ORTHO05D008663 7.4e-47 193.7 905 27.4
Glyma.10G228500 Glycine max HOM05D001090 ORTHO05D008663 5.3e-45 187.6 259 41.3
SMO011G0047 Selaginella moellendorffii HOM05D001090 ORTHO05D008663 3.0e-40 171.8 798 26.3
Dinv40410 Davidia involucrata HOM05D001090 ORTHO05D008663 3.3e-39 168.3 99 77.8
Mapoly0020s0076 Marchantia polymorpha HOM05D001090 ORTHO05D008663 1.3e-35 156.4 964 23.9
FvH4_5g25800 Fragaria vesca HOM05D000539 ORTHO05D000592 1.2e-25 123.2 180 41.1
AagrBONN_evm.TU.Sc2ySwM_368.1353 Anthoceros agrestis HOM05D001090 ORTHO05D008663 9.8e-23 113.6 201 33.3
CSS0004473 Camellia sinensis var. sinensis HOM05D001090 ORTHO05D008663 1.0e-19 103.6 270 33.0
CSS0019679 Camellia sinensis var. sinensis HOM05D001090 ORTHO05D008663 5.0e-19 101.3 270 32.6
CDE08G1173 Ceratophyllum demersum HOM05D001090 ORTHO05D008663 3.2e-13 82.0 141 35.5
CSS0043152 Camellia sinensis var. sinensis HOM05D001090 ORTHO05D008663 7.0e-13 80.9 82 54.9
CSS0030841 Camellia sinensis var. sinensis HOM05D001090 ORTHO05D008663 1.7e-11 76.3 76 55.3
Dinv40409 Davidia involucrata HOM05D001090 ORTHO05D008663 4.3e-10 71.6 57 50.9
Lsat_1_v5_gn_3_23020 Lactuca sativa HOM05D001090 ORTHO05D008663 7.3e-10 70.9 54 61.1
TAR625G1206 Trochodendron aralioides HOM05D001090 ORTHO05D008663 1.2e-09 70.1 79 50.6
HanXRQChr10g0316851 Helianthus annuus HOM05D000066 ORTHO05D009093 1.6e-09 69.7 67 53.7
CBR_g8279 Chara braunii HOM05D001090 ORTHO05D008663 3.6e-09 68.6 76 46.1
Actinidia25217 Actinidia chinensis HOM05D001090 ORTHO05D008663 6.8e-08 64.3 78 48.7
Potri.001G274900 Populus trichocarpa HOM05D003550 ORTHO05D004336 4.9e-06 58.2 391 24.6
SEGI_30951 Sequoiadendron giganteum HOM05D001090 ORTHO05D002119 4.9e-06 58.2 106 35.8
Pp3c14_3010 Physcomitrium patens HOM05D001090 ORTHO05D008663 6.4e-06 57.8 96 37.5
SMO143G0139 Selaginella moellendorffii HOM05D001090 ORTHO05D008663 8.3e-06 57.4 66 43.9


User provided reference genes

Program Settings