Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16444 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 4.8e-194 681.0 350 100.0
CSS0008085 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 2.0e-38 164.1 94 93.6
CSS0027136 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 2.0e-38 164.1 94 93.6
Rhsim11G0071000 Rhododendron simsii HOM05D006317 ORTHO05D007852 2.6e-38 163.7 94 93.6
CSS0006686 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 1.7e-37 161.0 94 91.5
Actinidia29484 Actinidia chinensis HOM05D006317 ORTHO05D007852 3.7e-37 159.8 94 91.5
Dinv27277 Davidia involucrata HOM05D006317 ORTHO05D007852 2.4e-36 157.1 94 88.3
Dinv14667 Davidia involucrata HOM05D006317 ORTHO05D007852 1.2e-35 154.8 94 87.2
vmacro00858 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 1.2e-35 154.8 91 91.2
Hma1.2p1_0420F.1_g149670 Hydrangea macrophylla HOM05D006317 ORTHO05D007852 1.6e-35 154.5 94 86.2
MELO3C010655.2 Cucumis melo HOM05D006317 ORTHO05D007852 3.8e-34 149.8 94 85.1
RcHm_v2.0_Chr6g0296581 Rosa chinensis HOM05D006317 ORTHO05D007852 3.8e-34 149.8 94 85.1
CsaV3_6G034090 Cucumis sativus L. HOM05D006317 ORTHO05D007852 5.0e-34 149.4 94 84.0
MSTRG.25364 Avicennia marina HOM05D006317 ORTHO05D007852 1.1e-33 148.3 94 81.9
CiPaw.15G032500 Carya illinoinensis HOM05D006317 ORTHO05D007852 1.1e-33 148.3 94 83.0
Cc10_g12550 Coffea canephora HOM05D006317 ORTHO05D007852 1.1e-33 148.3 94 83.0
Medtr3g088525 Medicago truncatula HOM05D006317 ORTHO05D007852 1.1e-33 148.3 94 83.0
Phvul.009G129100 Phaseolus vulgaris HOM05D006317 ORTHO05D007852 1.1e-33 148.3 94 84.0
QL09p032738 Quercus lobata HOM05D006317 ORTHO05D007852 1.1e-33 148.3 94 83.0
FvH4_2g27730 Fragaria vesca HOM05D006317 ORTHO05D007852 1.5e-33 147.9 94 83.0
FAN20G1754 Fragaria x ananassa HOM05D006317 ORTHO05D007852 1.5e-33 147.9 94 83.0
FAN24G3505 Fragaria x ananassa HOM05D006317 ORTHO05D007852 1.9e-33 147.5 92 83.7
Glyma.04G246100 Glycine max HOM05D006317 ORTHO05D007852 1.9e-33 147.5 94 83.0
Lalb_Chr08g0241161 Lupinus albus HOM05D006317 ORTHO05D007852 1.9e-33 147.5 94 83.0
Cfa018120 Carpinus fangiana HOM05D006317 ORTHO05D007852 2.5e-33 147.1 94 81.9
Gohir.A05G237800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 2.5e-33 147.1 94 84.0
ECA246G3352 Erigeron canadensis HOM05D006317 ORTHO05D007852 3.2e-33 146.7 94 83.0
Sed0014816 Sechium edule HOM05D006317 ORTHO05D007852 3.2e-33 146.7 94 83.0
TWI32G0551 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 3.2e-33 146.7 94 81.9
VMungo1309G0699 Vigna mungo HOM05D006317 ORTHO05D007852 3.2e-33 146.7 94 84.0
GSVIVG01036785001 Vitis vinifera HOM05D006317 ORTHO05D007852 4.2e-33 146.4 94 81.9
Gohir.D05G239800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 5.5e-33 146.0 94 83.0
Gorai.009G248700 Gossypium raimondii HOM05D006317 ORTHO05D007852 5.5e-33 146.0 94 83.0
TAR375G0871 Trochodendron aralioides HOM05D006317 ORTHO05D007852 5.5e-33 146.0 94 80.9
unitig_22.g5398 Utricularia gibba HOM05D006317 ORTHO05D007852 5.5e-33 146.0 94 83.0
Oeu021883.1 Olea europaea HOM05D006317 ORTHO05D007852 7.2e-33 145.6 94 81.9
Peaxi162Scf01003g00121 Petunia axillaris HOM05D006317 ORTHO05D007852 7.2e-33 145.6 94 81.9
Glyma.06G116700 Glycine max HOM05D006317 ORTHO05D007852 9.4e-33 145.2 94 81.9
Lsat_1_v5_gn_6_109060 Lactuca sativa HOM05D006317 ORTHO05D007852 9.4e-33 145.2 115 70.4
Nitab4.5_0001168g0010 Nicotiana tabacum HOM05D006317 ORTHO05D007852 9.4e-33 145.2 94 80.9
Oeu051968.1 Olea europaea HOM05D006317 ORTHO05D007852 9.4e-33 145.2 94 83.0
SalBow2G0856 Salvia bowleyana HOM05D006317 ORTHO05D007852 9.4e-33 145.2 94 83.0
Lj1g0010212 Lotus japonicus HOM05D006317 ORTHO05D007852 1.6e-32 144.4 94 80.9
Manes.02G167400 Manihot esculenta HOM05D006317 ORTHO05D007852 1.6e-32 144.4 94 80.9
Nitab4.5_0002045g0100 Nicotiana tabacum HOM05D006317 ORTHO05D007852 1.6e-32 144.4 94 80.9
Sed0004620 Sechium edule HOM05D006317 ORTHO05D007852 1.6e-32 144.4 94 80.9
arahy.Tifrunner.gnm1.ann1.0GY0RD Arachis hypogaea HOM05D006317 ORTHO05D007852 2.1e-32 144.1 94 79.8
arahy.Tifrunner.gnm1.ann1.ID1H8K Arachis hypogaea HOM05D006317 ORTHO05D007852 2.1e-32 144.1 94 79.8
SGA_v2.0_scaffold25G11134 Striga asiatica HOM05D006317 ORTHO05D007852 2.1e-32 144.1 94 81.9
Eucgr.D00248 Eucalyptus grandis HOM05D006317 ORTHO05D007852 2.7e-32 143.7 94 78.7
Nn1g09356 Nelumbo nucifera HOM05D006317 ORTHO05D007852 2.7e-32 143.7 94 77.7
Psat5g085080 Pisum sativum HOM05D006317 ORTHO05D007852 2.7e-32 143.7 94 80.9
Duzib116G0606 Durio zibethinus HOM05D006317 ORTHO05D007852 3.6e-32 143.3 94 79.8
Thecc.08G132100 Theobroma cacao HOM05D006317 ORTHO05D007852 3.6e-32 143.3 94 80.9
Manes.18G081900 Manihot esculenta HOM05D006317 ORTHO05D007852 4.7e-32 142.9 94 79.8
TWI34G0863 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 4.7e-32 142.9 94 79.8
Migut.N03266 Erythranthe guttata HOM05D006317 ORTHO05D007852 6.1e-32 142.5 94 79.8
FAN27G3154 Fragaria x ananassa HOM05D006317 ORTHO05D007852 8.0e-32 142.1 91 81.3
Lalb_Chr23g0271161 Lupinus albus HOM05D006317 ORTHO05D007852 8.0e-32 142.1 94 79.8
Solyc11g005000.2 Solanum lycopersicum HOM05D006317 ORTHO05D007852 8.0e-32 142.1 94 79.8
unitig_8.g3836 Utricularia gibba HOM05D006317 ORTHO05D007852 8.0e-32 142.1 94 78.7
Cpa.g.sc64.145 Carica papaya HOM05D006317 ORTHO05D007852 1.0e-31 141.7 94 79.8
PGSC0003DMG400006049 Solanum tuberosum HOM05D006317 ORTHO05D007852 1.0e-31 141.7 94 80.9
Atru.chr13.1550 Acer truncatum HOM05D006317 ORTHO05D007852 1.8e-31 141.0 94 78.7
Ciclev10002865m.g Citrus clementina HOM05D006317 ORTHO05D007852 1.8e-31 141.0 94 77.7
Duzib041G0795 Durio zibethinus HOM05D006317 ORTHO05D007852 1.8e-31 141.0 94 78.7
Sopen11g001020 Solanum pennellii HOM05D006317 ORTHO05D007852 1.8e-31 141.0 94 78.7
CANSAT35G0412 Cannabis sativa HOM05D006317 ORTHO05D007852 2.3e-31 140.6 94 79.8
HanXRQChr05g0148711 Helianthus annuus HOM05D006317 ORTHO05D007852 2.3e-31 140.6 87 83.9
Prupe.1G490600 Prunus persica HOM05D006317 ORTHO05D007852 3.0e-31 140.2 94 79.8
CAN.G342.14 Capsicum annuum HOM05D006317 ORTHO05D007852 4.0e-31 139.8 94 78.7
CDE06G2198 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 4.0e-31 139.8 94 75.5
ATR1101G062 Amborella trichopoda HOM05D006317 ORTHO05D007852 8.8e-31 138.7 94 75.5
PGR044G1554 Punica granatum HOM05D006317 ORTHO05D007852 8.8e-31 138.7 94 78.7
Sc10g0008060 Simmondsia chinensis HOM05D006317 ORTHO05D007852 1.2e-30 138.3 94 75.5
Potri.019G066600 Populus trichocarpa HOM05D006317 ORTHO05D007852 1.5e-30 137.9 93 78.5
CDE07G1891 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 2.6e-30 137.1 94 77.7
THA.LOC104813677 Tarenaya hassleriana HOM05D006317 ORTHO05D007852 2.6e-30 137.1 94 76.6
MBI03_g35425_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 3.4e-30 136.7 94 74.5
CARHR070830 Cardamine hirsuta HOM05D006317 ORTHO05D007852 4.4e-30 136.3 94 76.6
COL.COLO4_05688 Corchorus olitorius HOM05D006317 ORTHO05D007852 4.4e-30 136.3 91 78.0
Carub.0002s2423 Capsella rubella HOM05D006317 ORTHO05D007852 9.7e-30 135.2 94 75.5
Thhalv10019323m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 1.7e-29 134.4 94 75.5
Aa31LG4G7370 Aethionema arabicum HOM05D006317 ORTHO05D007852 2.2e-29 134.0 94 75.5
A06p17730 Brassica napus HOM05D006317 ORTHO05D007852 2.2e-29 134.0 94 73.4
BcaB07g32159 Brassica carinata HOM05D006317 ORTHO05D007852 8.3e-29 132.1 94 73.4
A08p28870 Brassica napus HOM05D006317 ORTHO05D007852 1.1e-28 131.7 94 74.5
BraA06t24865Z Brassica rapa HOM05D006317 ORTHO05D007852 1.4e-28 131.3 94 72.3
Sp1g19190 Schrenkiella parvula HOM05D006317 ORTHO05D007852 1.4e-28 131.3 94 73.4
AT1G77350 Arabidopsis thaliana HOM05D006317 ORTHO05D007852 5.3e-28 129.4 95 73.7
C08p20980 Brassica napus HOM05D006317 ORTHO05D007852 7.0e-28 129.0 94 72.3
BolC8t49735H Brassica oleracea HOM05D006317 ORTHO05D007852 7.0e-28 129.0 94 72.3
BraA08t34818Z Brassica rapa HOM05D006317 ORTHO05D007852 7.0e-28 129.0 94 72.3
Aqoxy1G01739 Aquilegia oxysepala HOM05D006317 ORTHO05D007852 1.2e-27 128.3 94 72.3
Ah.01g020580 Amaranthus hybridus HOM05D006317 ORTHO05D007852 1.6e-27 127.9 94 69.1
BcaC06g34898 Brassica carinata HOM05D006317 ORTHO05D007852 2.0e-27 127.5 93 72.0
A07p14980 Brassica napus HOM05D006317 ORTHO05D007852 2.0e-27 127.5 93 72.0
BolC7t42733H Brassica oleracea HOM05D006317 ORTHO05D007852 2.0e-27 127.5 93 72.0
BraA07t29244Z Brassica rapa HOM05D006317 ORTHO05D007852 2.0e-27 127.5 93 72.0
HPP92_021212 Vanilla planifolia HOM05D006317 ORTHO05D007852 2.0e-27 127.5 94 74.5
BcaB03g14259 Brassica carinata HOM05D006317 ORTHO05D007852 4.5e-27 126.3 94 70.2
C07p22030 Brassica napus HOM05D006317 ORTHO05D007852 5.9e-27 125.9 92 71.7
Thhalv10009123m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 7.7e-27 125.6 95 72.6
EL10Ac9g21899 Beta vulgaris HOM05D006317 ORTHO05D007852 2.9e-26 123.6 91 70.3
ClCG08G005990 Citrullus lanatus HOM05D006317 ORTHO05D007852 5.0e-26 122.9 144 53.5
Mapoly0014s0111 Marchantia polymorpha HOM05D006317 ORTHO05D007852 8.5e-26 122.1 94 63.8
Sabra19G0078300 Salix brachista HOM05D006317 ORTHO05D007852 1.9e-25 120.9 107 67.3
AUR62016336 Chenopodium quinoa HOM05D006317 ORTHO05D007852 2.5e-25 120.6 94 67.0
Zm00001eb128810 Zea mays HOM05D006317 ORTHO05D007852 4.2e-25 119.8 94 69.1
SHI09189 Sapria himalayana HOM05D006317 ORTHO05D007852 7.2e-25 119.0 105 63.8
Os05g0486200 Oryza sativa ssp. japonica HOM05D006317 ORTHO05D007852 9.4e-25 118.6 88 72.7
AL2G37550 Arabidopsis lyrata HOM05D006317 ORTHO05D007852 1.6e-24 117.9 120 60.0
CBR_g12067 Chara braunii HOM05D006317 ORTHO05D007852 2.7e-24 117.1 88 68.2
AagrBONN_evm.TU.Sc2ySwM_344.4689 Anthoceros agrestis HOM05D006317 ORTHO05D007852 2.3e-23 114.0 94 59.6
DCAR_018876 Daucus carota HOM05D006317 ORTHO05D007852 2.0e-22 110.9 67 86.6
MBI06_g36652_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 2.0e-22 110.9 94 66.0
Nn7g37402 Nelumbo nucifera HOM05D006317 ORTHO05D007852 1.7e-21 107.8 68 76.5
SMO298G0052 Selaginella moellendorffii HOM05D006317 ORTHO05D007852 2.8e-21 107.1 86 62.8
CSS0043705 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 1.8e-15 87.8 44 95.5
BcaB03g14260 Brassica carinata HOM05D006317 ORTHO05D007852 2.3e-15 87.4 95 56.8
Gohir.A02G071601 Gossypium hirsutum HOM05D006317 ORTHO05D007852 2.3e-15 87.4 58 79.3
SGA_v2.0_scaffold28G11977 Striga asiatica HOM05D006317 ORTHO05D007852 1.6e-11 74.7 52 80.8
BolC5t30761H Brassica oleracea HOM05D006317 ORTHO05D007852 7.3e-09 65.9 52 69.2
FAN15G1039 Fragaria x ananassa HOM05D006317 ORTHO05D007852 2.0e-06 57.8 37 75.7
Haze_17997 Corylus avellana HOM05D001650 ORTHO05D001592 5.8e-06 56.2 89 40.4


User provided reference genes

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