Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16443 Vaccinium macrocarpon HOM05D011420 ORTHO05D019352 1.3e-224 782.7 385 100.0
Rhsim06G0023600 Rhododendron simsii HOM05D011420 ORTHO05D019352 3.0e-80 303.1 473 42.7
vmacro05150 Vaccinium macrocarpon HOM05D011420 ORTHO05D019352 1.1e-74 284.6 224 70.1
Rhsim02G0107300 Rhododendron simsii HOM05D036465 ORTHO05D340015 9.7e-31 138.7 293 36.2
Rhsim02G0060500 Rhododendron simsii HOM05D011420 ORTHO05D338737 1.4e-29 134.8 208 44.2
Rhsim02G0108500 Rhododendron simsii HOM05D036465 ORTHO05D339503 2.4e-29 134.0 262 38.2
Rhsim05G0046300 Rhododendron simsii HOM05D011420 ORTHO05D023110 2.2e-22 110.9 243 39.9
RhsimUnG0140800 Rhododendron simsii HOM05D011420 ORTHO05D023110 2.2e-22 110.9 243 39.9
RhsimUnG0229100 Rhododendron simsii HOM05D011420 ORTHO05D023110 2.8e-22 110.5 303 33.0
RhsimUnG0229500 Rhododendron simsii HOM05D011420 ORTHO05D023110 8.2e-22 109.0 214 37.9
vmacro19721 Vaccinium macrocarpon HOM05D036465 ORTHO05D426857 8.2e-22 109.0 300 31.3
Rhsim04G0200300 Rhododendron simsii HOM05D011420 ORTHO05D339257 3.8e-19 100.1 189 37.0
Rhsim09G0098400 Rhododendron simsii HOM05D011420 ORTHO05D023110 6.1e-17 92.8 209 33.5
vmacro11330 Vaccinium macrocarpon HOM05D011420 ORTHO05D427076 6.1e-17 92.8 209 34.0
vmacro16465 Vaccinium macrocarpon HOM05D000318 ORTHO05D000420 1.3e-11 75.1 195 33.8
Rhsim08G0226000 Rhododendron simsii HOM05D011420 ORTHO05D338901 3.8e-11 73.6 131 38.2
CDE09G0722 Ceratophyllum demersum HOM05D005214 ORTHO05D005861 6.5e-11 72.8 179 34.1
Aqoxy2G03015 Aquilegia oxysepala HOM05D005214 ORTHO05D005861 8.5e-11 72.4 184 32.1
PSO541G2582 Papaver somniferum HOM05D005214 ORTHO05D005861 1.9e-10 71.2 180 34.4
vmacro18699 Vaccinium macrocarpon HOM05D011420 ORTHO05D023110 1.9e-10 71.2 157 38.9
TAR362G1097 Trochodendron aralioides HOM05D005214 ORTHO05D005861 2.5e-10 70.9 177 33.9
PSO675G4608 Papaver somniferum HOM05D005214 ORTHO05D005861 7.2e-10 69.3 180 33.9
HanXRQChr11g0339491 Helianthus annuus HOM05D005214 ORTHO05D005861 1.2e-09 68.6 253 28.5
Nn8g40789 Nelumbo nucifera HOM05D005214 ORTHO05D005861 1.2e-09 68.6 179 33.5
Sp2g20820 Schrenkiella parvula HOM05D005214 ORTHO05D005861 1.2e-09 68.6 179 33.0
Dinv40313 Davidia involucrata HOM05D005214 ORTHO05D005861 1.6e-09 68.2 179 33.5
Sabra13G0021100 Salix brachista HOM05D005214 ORTHO05D005861 1.6e-09 68.2 179 33.0
ECA236G2130 Erigeron canadensis HOM05D005214 ORTHO05D005861 2.1e-09 67.8 259 29.3
Manes.08G119000 Manihot esculenta HOM05D005214 ORTHO05D005861 2.1e-09 67.8 179 33.5
QL03p011667 Quercus lobata HOM05D005214 ORTHO05D005861 2.1e-09 67.8 245 29.0
QL03p021693 Quercus lobata HOM05D005214 ORTHO05D005861 2.1e-09 67.8 245 29.0
BcaNung04541 Brassica carinata HOM05D005214 ORTHO05D005861 2.7e-09 67.4 179 32.4
CANSAT54G2509 Cannabis sativa HOM05D005214 ORTHO05D005861 2.7e-09 67.4 177 33.3
Cc00_g10460 Coffea canephora HOM05D005214 ORTHO05D005861 2.7e-09 67.4 227 30.8
vmacro04966 Vaccinium macrocarpon HOM05D005214 ORTHO05D005861 2.7e-09 67.4 273 31.1
Atru.chr2.17 Acer truncatum HOM05D005214 ORTHO05D005861 3.6e-09 67.0 177 33.3
Sed0006034 Sechium edule HOM05D005214 ORTHO05D005861 3.6e-09 67.0 179 33.5
Thecc.05G311500 Theobroma cacao HOM05D005214 ORTHO05D005861 3.6e-09 67.0 179 31.3
AL6G39370 Arabidopsis lyrata HOM05D005214 ORTHO05D005861 4.7e-09 66.6 179 31.8
BcaNung04538 Brassica carinata HOM05D005214 ORTHO05D005861 4.7e-09 66.6 179 32.4
A06p37390 Brassica napus HOM05D005214 ORTHO05D005861 4.7e-09 66.6 179 32.4
C07p40960 Brassica napus HOM05D005214 ORTHO05D005861 4.7e-09 66.6 179 32.4
BolC7t44627H Brassica oleracea HOM05D005214 ORTHO05D005861 4.7e-09 66.6 179 32.4
BraA06t26663Z Brassica rapa HOM05D005214 ORTHO05D005861 4.7e-09 66.6 179 32.4
CSS0006401 Camellia sinensis var. sinensis HOM05D005214 ORTHO05D005861 4.7e-09 66.6 234 26.9
Carub.0006s2493 Capsella rubella HOM05D005214 ORTHO05D005861 4.7e-09 66.6 179 31.8
Duzib128G1190 Durio zibethinus HOM05D005214 ORTHO05D005861 4.7e-09 66.6 179 31.8
Glyma.19G234200 Glycine max HOM05D005214 ORTHO05D005861 4.7e-09 66.6 267 26.6
Prupe.6G322200 Prunus persica HOM05D005214 ORTHO05D005861 4.7e-09 66.6 190 29.5
CSS0021432 Camellia sinensis var. sinensis HOM05D005214 ORTHO05D005861 6.1e-09 66.2 247 26.7
SalBow3G0885 Salvia bowleyana HOM05D005214 ORTHO05D005861 6.1e-09 66.2 193 32.6
Aa31LG11G9400 Aethionema arabicum HOM05D005214 ORTHO05D005861 8.0e-09 65.9 179 32.4
Haze_04157 Corylus avellana HOM05D005214 ORTHO05D005861 8.0e-09 65.9 204 29.9
Potri.013G018300 Populus trichocarpa HOM05D005214 ORTHO05D005861 8.0e-09 65.9 179 32.4
Hund07090 Selenicereus undatus HOM05D005214 ORTHO05D005861 8.0e-09 65.9 179 33.0
Cfa006617 Carpinus fangiana HOM05D005214 ORTHO05D005861 1.0e-08 65.5 179 31.3
MELO3C004228.2 Cucumis melo HOM05D005214 ORTHO05D005861 1.0e-08 65.5 179 33.0
ATR0743G060 Amborella trichopoda HOM05D005214 ORTHO05D005861 1.4e-08 65.1 179 33.0
CARHR186180 Cardamine hirsuta HOM05D005214 ORTHO05D005861 1.4e-08 65.1 179 31.8
AUR62000783 Chenopodium quinoa HOM05D005214 ORTHO05D005861 1.4e-08 65.1 179 31.3
CsaV3_2G006580 Cucumis sativus L. HOM05D005214 ORTHO05D005861 1.4e-08 65.1 179 34.1
Lj9A119G25 Lonicera japonica HOM05D005214 ORTHO05D005861 1.4e-08 65.1 179 33.5
AT5G27660 Arabidopsis thaliana HOM05D005214 ORTHO05D005861 1.8e-08 64.7 179 31.8
Eucgr.H04504 Eucalyptus grandis HOM05D005214 ORTHO05D005861 2.3e-08 64.3 181 33.1
Rhsim07G0186700 Rhododendron simsii HOM05D005214 ORTHO05D005861 2.3e-08 64.3 179 33.5
GSVIVG01031122001 Vitis vinifera HOM05D005214 ORTHO05D005861 2.3e-08 64.3 179 32.4
Actinidia05683 Actinidia chinensis HOM05D005214 ORTHO05D005861 3.0e-08 63.9 179 33.0
Haze_04156 Corylus avellana HOM05D005214 ORTHO05D007291 3.0e-08 63.9 179 31.8
FAN02G3954 Fragaria x ananassa HOM05D005214 ORTHO05D005861 3.0e-08 63.9 180 30.6
THA.LOC104802800 Tarenaya hassleriana HOM05D005214 ORTHO05D005861 3.0e-08 63.9 179 30.7
CSS0000343 Camellia sinensis var. sinensis HOM05D005214 ORTHO05D005861 4.0e-08 63.5 179 31.8
COL.COLO4_10501 Corchorus olitorius HOM05D005214 ORTHO05D005861 4.0e-08 63.5 179 30.7
MBI07_g30867_MAGBIO Magnolia biondii HOM05D005214 ORTHO05D005861 4.0e-08 63.5 178 34.8
EL10Ac4g09934 Beta vulgaris HOM05D005214 ORTHO05D005861 5.2e-08 63.2 179 31.8
FAN05G5708 Fragaria x ananassa HOM05D005214 ORTHO05D005861 5.2e-08 63.2 179 30.7
Lsat_1_v5_gn_9_87421 Lactuca sativa HOM05D005214 ORTHO05D005861 5.2e-08 63.2 151 33.1
Oeu040762.1 Olea europaea HOM05D005214 ORTHO05D005861 5.2e-08 63.2 189 32.3
RcHm_v2.0_Chr3g0455481 Rosa chinensis HOM05D005214 ORTHO05D005861 5.2e-08 63.2 177 31.1
Thhalv10004245m.g Eutrema salsugineum HOM05D005214 ORTHO05D005861 6.8e-08 62.8 179 31.3
FvH4_6g06420 Fragaria vesca HOM05D005214 ORTHO05D005861 6.8e-08 62.8 179 30.7
CiPaw.07G020400 Carya illinoinensis HOM05D005214 ORTHO05D005861 8.8e-08 62.4 179 32.4
Gohir.A08G209100 Gossypium hirsutum HOM05D005214 ORTHO05D005861 8.8e-08 62.4 179 30.7
TWI12G0218 Tripterygium wilfordii HOM05D005214 ORTHO05D005861 8.8e-08 62.4 177 30.5
DCAR_022150 Daucus carota HOM05D005214 ORTHO05D005861 1.2e-07 62.0 179 30.7
Gohir.D08G226000 Gossypium hirsutum HOM05D005214 ORTHO05D005861 1.2e-07 62.0 179 30.7
Gorai.004G240000 Gossypium raimondii HOM05D005214 ORTHO05D005861 1.2e-07 62.0 179 30.7
Hma1.2p1_1212F.1_g267370 Hydrangea macrophylla HOM05D005214 ORTHO05D005861 1.2e-07 62.0 179 30.2
Lj1g0009363 Lotus japonicus HOM05D005214 ORTHO05D005861 1.2e-07 62.0 179 30.7
Rhsim04G0200600 Rhododendron simsii HOM05D007604 ORTHO05D008966 1.2e-07 62.0 164 27.4
Nitab4.5_0002144g0030 Nicotiana tabacum HOM05D005214 ORTHO05D005861 2.0e-07 61.2 179 31.3
Zm00001eb168260 Zea mays HOM05D005214 ORTHO05D005861 2.0e-07 61.2 176 30.7
MSTRG.27985 Avicennia marina HOM05D005214 ORTHO05D005861 2.6e-07 60.8 179 31.8
TWI12G0067 Tripterygium wilfordii HOM05D005214 ORTHO05D005861 3.4e-07 60.5 179 31.3
CAN.G619.10 Capsicum annuum HOM05D005214 ORTHO05D005861 4.4e-07 60.1 179 31.8
Ciclev10001167m.g Citrus clementina HOM05D005214 ORTHO05D005861 4.4e-07 60.1 151 33.1
Medtr7g113170 Medicago truncatula HOM05D005214 ORTHO05D005861 5.7e-07 59.7 179 29.6
VMungo0540G0352 Vigna mungo HOM05D005214 ORTHO05D005861 7.5e-07 59.3 179 29.1
TWI12G1447 Tripterygium wilfordii HOM05D005214 ORTHO05D005861 9.8e-07 58.9 266 27.4
Lj1g0025562 Lotus japonicus HOM05D005214 ORTHO05D005861 1.3e-06 58.5 184 29.9
Phvul.006G090500 Phaseolus vulgaris HOM05D005214 ORTHO05D005861 1.3e-06 58.5 181 30.9
ClCG02G015500 Citrullus lanatus HOM05D005214 ORTHO05D005861 3.7e-06 57.0 149 34.2
FAN17G2752 Fragaria x ananassa HOM05D005214 ORTHO05D005861 3.7e-06 57.0 179 29.1


User provided reference genes

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