Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16391 Vaccinium macrocarpon HOM05D007031 ORTHO05D008815 2.0e-64 248.8 116 100.0
CSS0002961 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 7.7e-48 193.7 111 80.2
CSS0040909 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 6.5e-47 190.7 110 80.0
THA.LOC104815489 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 1.4e-46 189.5 108 78.7
Ciclev10022693m.g Citrus clementina HOM05D007031 ORTHO05D008815 3.6e-45 184.9 106 82.1
BcaC09g50373 Brassica carinata HOM05D007031 ORTHO05D008815 1.4e-44 183.0 104 78.8
MSTRG.13772 Avicennia marina HOM05D007031 ORTHO05D008815 1.8e-44 182.6 105 81.9
Gohir.D08G188900 Gossypium hirsutum HOM05D007031 ORTHO05D008815 1.8e-44 182.6 107 77.6
Gorai.004G199000 Gossypium raimondii HOM05D007031 ORTHO05D008815 1.8e-44 182.6 107 77.6
Carub.0007s2484 Capsella rubella HOM05D007031 ORTHO05D008815 5.1e-44 181.0 104 78.8
Dinv21635 Davidia involucrata HOM05D007031 ORTHO05D008815 5.1e-44 181.0 102 85.3
Atru.chr9.1322 Acer truncatum HOM05D007031 ORTHO05D008815 6.7e-44 180.6 104 80.8
Duzib205G0920 Durio zibethinus HOM05D007031 ORTHO05D008815 6.7e-44 180.6 104 81.7
CAN.G1227.14 Capsicum annuum HOM05D007031 ORTHO05D008815 8.8e-44 180.3 102 80.4
Hma1.2p1_0316F.1_g123210 Hydrangea macrophylla HOM05D007031 ORTHO05D008815 1.1e-43 179.9 106 80.2
Actinidia14432 Actinidia chinensis HOM05D007031 ORTHO05D008815 1.5e-43 179.5 109 78.9
BcaNung00171 Brassica carinata HOM05D007031 ORTHO05D008815 1.5e-43 179.5 104 77.9
CARHR223050 Cardamine hirsuta HOM05D007031 ORTHO05D008815 2.5e-43 178.7 104 76.9
AT4G16566 Arabidopsis thaliana HOM05D007031 ORTHO05D008815 4.3e-43 177.9 104 76.9
BolC1t02559H Brassica oleracea HOM05D007031 ORTHO05D008815 5.7e-43 177.6 105 78.1
BraA01t02001Z Brassica rapa HOM05D007031 ORTHO05D008815 7.4e-43 177.2 105 78.1
AL7G38210 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 1.3e-42 176.4 104 76.0
Solyc08g007380.4 Solanum lycopersicum HOM05D007031 ORTHO05D008815 1.7e-42 176.0 102 79.4
Sopen08g003330 Solanum pennellii HOM05D007031 ORTHO05D008815 1.7e-42 176.0 102 79.4
AL7G38260 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 2.2e-42 175.6 104 76.0
PSO386G0128 Papaver somniferum HOM05D007031 ORTHO05D008815 8.2e-42 173.7 102 78.4
TAR636G3191 Trochodendron aralioides HOM05D007031 ORTHO05D008815 8.2e-42 173.7 105 78.1
CDE09G0628 Ceratophyllum demersum HOM05D005321 ORTHO05D006360 1.4e-41 172.9 102 76.5
Thhalv10026497m.g Eutrema salsugineum HOM05D007031 ORTHO05D008815 1.4e-41 172.9 110 71.8
TWI60G0154 Tripterygium wilfordii HOM05D007031 ORTHO05D008815 1.8e-41 172.6 102 78.4
Aa31LG2G12690 Aethionema arabicum HOM05D007031 ORTHO05D008815 2.4e-41 172.2 109 70.6
Cc08_g12500 Coffea canephora HOM05D007031 ORTHO05D008815 2.4e-41 172.2 104 76.0
Migut.E00966 Erythranthe guttata HOM05D007031 ORTHO05D008815 2.4e-41 172.2 102 78.4
Lj2A217G30 Lonicera japonica HOM05D007031 ORTHO05D008815 2.4e-41 172.2 103 76.7
Migut.E01683 Erythranthe guttata HOM05D007031 ORTHO05D008815 3.1e-41 171.8 102 78.4
PSO724G0679 Papaver somniferum HOM05D007031 ORTHO05D008815 3.1e-41 171.8 102 77.5
Lj2g0002187 Lotus japonicus HOM05D007031 ORTHO05D008815 4.1e-41 171.4 111 73.0
Gohir.A08G170700 Gossypium hirsutum HOM05D007031 ORTHO05D008815 5.3e-41 171.0 107 74.8
CiPaw.12G109600 Carya illinoinensis HOM05D007031 ORTHO05D008815 1.5e-40 169.5 103 75.7
HPP92_021039 Vanilla planifolia HOM05D007031 ORTHO05D008815 1.5e-40 169.5 105 75.2
HPP92_027426 Vanilla planifolia HOM05D007031 ORTHO05D008815 1.5e-40 169.5 105 75.2
unitig_699.g19776 Utricularia gibba HOM05D007031 ORTHO05D008815 2.0e-40 169.1 102 75.5
MBI04_g09491_MAGBIO Magnolia biondii HOM05D007031 ORTHO05D008815 3.4e-40 168.3 102 77.5
TPR.G25905 Trifolium pratense HOM05D007031 ORTHO05D008815 3.4e-40 168.3 102 78.4
Lsat_1_v5_gn_5_187960 Lactuca sativa HOM05D007031 ORTHO05D008815 4.5e-40 167.9 102 77.5
Psat2g177560 Pisum sativum HOM05D007031 ORTHO05D008815 7.7e-40 167.2 110 71.8
Sed0003740 Sechium edule HOM05D007031 ORTHO05D008815 7.7e-40 167.2 101 74.3
Phvul.002G062701 Phaseolus vulgaris HOM05D007031 ORTHO05D008815 1.0e-39 166.8 105 75.2
DCAR_027778 Daucus carota HOM05D007031 ORTHO05D008815 1.3e-39 166.4 111 70.3
QL12p012249 Quercus lobata HOM05D007031 ORTHO05D008815 1.3e-39 166.4 101 76.2
Glyma.11G032300 Glycine max HOM05D007031 ORTHO05D008815 1.7e-39 166.0 104 75.0
ClCG01G004020 Citrullus lanatus HOM05D007031 ORTHO05D008815 2.9e-39 165.2 100 75.0
Eucgr.E00427 Eucalyptus grandis HOM05D007031 ORTHO05D008815 2.9e-39 165.2 101 76.2
Lalb_Chr09g0324411 Lupinus albus HOM05D007031 ORTHO05D008815 5.0e-39 164.5 111 70.3
Peaxi162Scf00102g01143 Petunia axillaris HOM05D007031 ORTHO05D008815 5.0e-39 164.5 102 74.5
RcHm_v2.0_Chr7g0203161 Rosa chinensis HOM05D007031 ORTHO05D008815 6.5e-39 164.1 105 74.3
ECA232G3888 Erigeron canadensis HOM05D007031 ORTHO05D008815 8.5e-39 163.7 102 75.5
FAN08G1843 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.1e-38 163.3 105 72.4
FAN13G0327 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.1e-38 163.3 105 73.3
FAN18G3883 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.1e-38 163.3 105 73.3
Potri.003G076400 Populus trichocarpa HOM05D007031 ORTHO05D008815 1.9e-38 162.5 102 75.5
FvH4_5g18810 Fragaria vesca HOM05D007031 ORTHO05D008815 3.2e-38 161.8 103 73.8
Cfa012711 Carpinus fangiana HOM05D007031 ORTHO05D008815 4.2e-38 161.4 103 72.8
CsaV3_5G004200 Cucumis sativus L. HOM05D007031 ORTHO05D008815 5.5e-38 161.0 102 73.5
MELO3C005535.2 Cucumis melo HOM05D007031 ORTHO05D008815 7.2e-38 160.6 101 74.3
Aqoxy5G01014 Aquilegia oxysepala HOM05D007031 ORTHO05D008815 9.4e-38 160.2 102 73.5
BcaNung02861 Brassica carinata HOM05D007031 ORTHO05D008815 9.4e-38 160.2 102 72.5
CANSAT21G0077 Cannabis sativa HOM05D007031 ORTHO05D008815 1.6e-37 159.5 101 70.3
Hund14533 Selenicereus undatus HOM05D007031 ORTHO05D008815 1.6e-37 159.5 101 74.3
Os04g0535400 Oryza sativa ssp. japonica HOM05D007031 ORTHO05D008815 2.1e-37 159.1 102 74.5
ATR0317G125 Amborella trichopoda HOM05D007031 ORTHO05D008815 3.0e-36 155.2 103 70.9
Nitab4.5_0000712g0190 Nicotiana tabacum HOM05D007031 ORTHO05D008815 8.8e-36 153.7 166 51.8
arahy.Tifrunner.gnm1.ann1.R85P7C Arachis hypogaea HOM05D007031 ORTHO05D008815 1.1e-35 153.3 102 68.6
SEGI_08804 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 1.1e-35 153.3 105 66.7
arahy.Tifrunner.gnm1.ann1.WL6NYT Arachis hypogaea HOM05D007031 ORTHO05D008815 2.0e-35 152.5 102 68.6
Zm00001eb427450 Zea mays HOM05D007031 ORTHO05D008815 3.7e-34 148.3 101 67.3
CSS0026472 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 3.1e-33 145.2 84 77.4
CiPaw.11G153700 Carya illinoinensis HOM05D007031 ORTHO05D008815 9.1e-33 143.7 111 64.0
EL10Ac5g13074 Beta vulgaris HOM05D007031 ORTHO05D008815 2.2e-31 139.0 135 52.6
THA.LOC104815507 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 2.9e-31 138.7 79 77.2
FAN14G5160 Fragaria x ananassa HOM05D007031 ORTHO05D008815 3.8e-31 138.3 127 54.3
Sp7g15180 Schrenkiella parvula HOM05D007031 ORTHO05D008815 2.7e-29 132.1 107 58.9
C01p26150 Brassica napus HOM05D007031 ORTHO05D008815 3.6e-29 131.7 84 73.8
BolC7t45328H Brassica oleracea HOM05D007031 ORTHO05D008815 4.7e-29 131.3 89 70.8
A01p20650 Brassica napus HOM05D007031 ORTHO05D008815 1.0e-28 130.2 76 80.3
FAN04G1478 Fragaria x ananassa HOM05D007031 ORTHO05D008815 6.7e-28 127.5 82 73.2
MD04G1063700 Malus domestica HOM05D007031 ORTHO05D008815 8.8e-28 127.1 75 78.7
Sabra03G0047000 Salix brachista HOM05D007031 ORTHO05D008815 2.4e-25 119.0 121 55.4
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 3.1e-25 118.6 73 75.3
Nn6g33971 Nelumbo nucifera HOM05D007031 ORTHO05D008815 3.1e-25 118.6 76 72.4
VMungo1215G1202 Vigna mungo HOM05D007031 ORTHO05D008815 5.3e-25 117.9 75 72.0
Manes.02G039100 Manihot esculenta HOM05D007031 ORTHO05D008815 7.0e-25 117.5 74 73.0
Haze_07923 Corylus avellana HOM05D007031 ORTHO05D008815 2.0e-24 115.9 142 44.4
BcaC06g33496 Brassica carinata HOM05D007031 ORTHO05D008815 1.0e-23 113.6 71 74.6
AUR62007512 Chenopodium quinoa HOM05D007031 ORTHO05D008815 1.7e-23 112.8 74 71.6
AUR62042788 Chenopodium quinoa HOM05D007031 ORTHO05D008815 1.7e-23 112.8 74 71.6
Pp3c5_26880 Physcomitrium patens HOM05D007031 ORTHO05D008815 2.2e-23 112.5 102 51.0
SMO134G0120 Selaginella moellendorffii HOM05D000076 ORTHO05D001279 1.1e-22 110.2 100 53.0
SMO274G0074 Selaginella moellendorffii HOM05D007031 ORTHO05D008815 1.1e-22 110.2 100 53.0
Nitab4.5_0002225g0110 Nicotiana tabacum HOM05D007031 ORTHO05D008815 4.2e-22 108.2 129 49.6
Oeu062969.1 Olea europaea HOM05D007031 ORTHO05D008815 4.2e-22 108.2 62 74.2
Prupe.5G068700 Prunus persica HOM05D007031 ORTHO05D008815 5.7e-19 97.8 111 48.6
SalBow6G3941 Salvia bowleyana HOM05D007031 ORTHO05D008815 5.3e-17 91.3 71 64.8
Pp3c6_3420 Physcomitrium patens HOM05D029721 ORTHO05D008815 1.6e-16 89.7 84 54.8
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 7.7e-16 87.4 58 69.0
FAN02G0786 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.0e-15 87.0 65 64.6
MCO15G691 Micromonas commoda HOM05D007031 ORTHO05D008815 3.2e-14 82.0 109 41.3
Cre03.g169200 Chlamydomonas reinhardtii HOM05D007031 ORTHO05D008815 1.6e-13 79.7 84 46.4
Medtr5g012525 Medicago truncatula HOM05D007031 ORTHO05D008815 2.3e-12 75.9 53 71.7
Sc22g0000840 Simmondsia chinensis HOM05D007031 ORTHO05D008815 4.0e-12 75.1 46 78.3
GSVIVG01001319001 Vitis vinifera HOM05D007031 ORTHO05D008815 5.7e-11 71.2 49 73.5
SEGI_18261 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 3.1e-09 65.5 52 63.5


User provided reference genes

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