Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16274 Vaccinium macrocarpon HOM05D006231 ORTHO05D007857 8.4e-161 570.5 323 100.0
CSS0002380 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 1.4e-110 403.7 284 76.8
Actinidia15012 Actinidia chinensis HOM05D006231 ORTHO05D007857 1.5e-109 400.2 274 73.7
CSS0044234 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 1.5e-109 400.2 286 75.9
Dinv24894 Davidia involucrata HOM05D006231 ORTHO05D007857 2.2e-105 386.3 287 71.1
Hma1.2p1_1017F.1_g248270 Hydrangea macrophylla HOM05D006231 ORTHO05D007857 4.5e-98 362.1 295 66.8
Rhsim12G0123300 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.0e-97 360.9 284 68.0
CiPaw.05G148900 Carya illinoinensis HOM05D006231 ORTHO05D007857 6.8e-94 348.2 287 69.0
Cc11_g14350 Coffea canephora HOM05D006231 ORTHO05D007857 5.7e-93 345.1 281 61.9
Thecc.02G247800 Theobroma cacao HOM05D006231 ORTHO05D007857 6.3e-92 341.7 267 67.0
QL03p062170 Quercus lobata HOM05D006231 ORTHO05D007857 7.0e-91 338.2 295 65.4
Oeu046714.1 Olea europaea HOM05D006231 ORTHO05D007857 9.1e-91 337.8 268 64.9
COL.COLO4_19536 Corchorus olitorius HOM05D006231 ORTHO05D007857 1.3e-89 334.0 269 66.2
SalBow2G0481 Salvia bowleyana HOM05D006231 ORTHO05D007857 2.3e-89 333.2 253 65.6
Lalb_Chr09g0326451 Lupinus albus HOM05D006231 ORTHO05D007857 2.9e-89 332.8 239 69.9
CSS0037524 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 5.0e-89 332.0 238 69.7
Haze_12158 Corylus avellana HOM05D006231 ORTHO05D007857 2.5e-88 329.7 221 74.7
Cfa009127 Carpinus fangiana HOM05D006231 ORTHO05D007857 3.2e-88 329.3 285 63.5
MELO3C012017.2 Cucumis melo HOM05D006231 ORTHO05D007857 4.2e-88 328.9 268 62.7
PGSC0003DMG400004132 Solanum tuberosum HOM05D006231 ORTHO05D007857 4.2e-88 328.9 279 64.2
MSTRG.613 Avicennia marina HOM05D006231 ORTHO05D007857 5.5e-88 328.6 276 61.6
Eucgr.B02548 Eucalyptus grandis HOM05D006231 ORTHO05D007857 1.6e-87 327.0 271 64.2
CsaV3_5G031780 Cucumis sativus L. HOM05D006231 ORTHO05D007857 2.1e-87 326.6 268 61.9
Gorai.009G344200 Gossypium raimondii HOM05D006231 ORTHO05D007857 2.8e-87 326.2 236 69.1
Gohir.D05G320900 Gossypium hirsutum HOM05D006231 ORTHO05D007857 3.6e-87 325.9 236 69.9
TAR629G0133 Trochodendron aralioides HOM05D006231 ORTHO05D007857 3.6e-87 325.9 294 64.6
Migut.L01438 Erythranthe guttata HOM05D006231 ORTHO05D007857 4.7e-87 325.5 260 66.5
Aa31LG7G7830 Aethionema arabicum HOM05D006231 ORTHO05D007857 6.1e-87 325.1 245 67.3
THA.LOC104822957 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 1.0e-86 324.3 286 60.5
Ciclev10032202m.g Citrus clementina HOM05D006231 ORTHO05D007857 1.8e-86 323.6 288 61.8
ClCG05G025120 Citrullus lanatus HOM05D006231 ORTHO05D007857 4.0e-86 322.4 272 61.8
CAN.G505.18 Capsicum annuum HOM05D006231 ORTHO05D007857 8.9e-86 321.2 268 63.1
FvH4_4g34910 Fragaria vesca HOM05D006231 ORTHO05D007857 2.0e-85 320.1 313 57.8
THA.LOC104822056 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 2.0e-85 320.1 235 68.1
Carub.0001s2346 Capsella rubella HOM05D006231 ORTHO05D007857 2.6e-85 319.7 245 64.9
Sopen05g001920 Solanum pennellii HOM05D006231 ORTHO05D007857 2.6e-85 319.7 290 61.4
Atru.chr11.1975 Acer truncatum HOM05D006231 ORTHO05D007857 3.4e-85 319.3 241 69.3
RcHm_v2.0_Chr4g0444351 Rosa chinensis HOM05D006231 ORTHO05D007857 3.4e-85 319.3 295 62.0
Thhalv10008192m.g Eutrema salsugineum HOM05D006231 ORTHO05D007857 5.7e-85 318.5 240 65.8
Nitab4.5_0004963g0030 Nicotiana tabacum HOM05D006231 ORTHO05D007857 5.7e-85 318.5 269 61.7
Sp1g21370 Schrenkiella parvula HOM05D006231 ORTHO05D007857 5.7e-85 318.5 231 66.7
Manes.01G197500 Manihot esculenta HOM05D006231 ORTHO05D007857 7.5e-85 318.2 243 65.8
arahy.Tifrunner.gnm1.ann1.FQS9XH Arachis hypogaea HOM05D006231 ORTHO05D007857 1.3e-84 317.4 271 64.9
Gohir.A05G318600 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.7e-84 317.0 236 68.6
CARHR024340 Cardamine hirsuta HOM05D006231 ORTHO05D007857 2.2e-84 316.6 232 66.8
Nitab4.5_0001474g0130 Nicotiana tabacum HOM05D006231 ORTHO05D007857 2.8e-84 316.2 269 61.3
arahy.Tifrunner.gnm1.ann1.XK2UET Arachis hypogaea HOM05D006231 ORTHO05D007857 3.7e-84 315.8 271 63.1
FAN12G2615 Fragaria x ananassa HOM05D006231 ORTHO05D007857 3.7e-84 315.8 301 58.5
Nn4g22867 Nelumbo nucifera HOM05D006231 ORTHO05D007857 4.9e-84 315.5 224 71.0
BcaB07g32378 Brassica carinata HOM05D006231 ORTHO05D007857 8.3e-84 314.7 251 62.5
C05p23180 Brassica napus HOM05D006231 ORTHO05D007857 8.3e-84 314.7 219 68.0
Lj2g0015887 Lotus japonicus HOM05D006231 ORTHO05D007857 1.4e-83 313.9 226 69.0
Sed0009573 Sechium edule HOM05D006231 ORTHO05D007857 2.4e-83 313.2 248 62.5
AL1G37790 Arabidopsis lyrata HOM05D006231 ORTHO05D007857 3.1e-83 312.8 245 63.7
Gohir.D02G165000 Gossypium hirsutum HOM05D006231 ORTHO05D007857 9.2e-83 311.2 289 60.9
CANSAT01G1818 Cannabis sativa HOM05D006231 ORTHO05D007857 1.2e-82 310.8 292 61.6
Duzib248G0169 Durio zibethinus HOM05D006231 ORTHO05D007857 2.7e-82 309.7 235 67.2
AT1G24040 Arabidopsis thaliana HOM05D006231 ORTHO05D007857 4.5e-82 308.9 306 54.9
PGR119G0912 Punica granatum HOM05D006231 ORTHO05D007857 5.9e-82 308.5 283 59.0
AUR62005324 Chenopodium quinoa HOM05D006231 ORTHO05D007857 7.8e-82 308.1 315 55.9
TWI36G0577 Tripterygium wilfordii HOM05D006231 ORTHO05D007857 7.8e-82 308.1 290 58.3
BcaC05g26301 Brassica carinata HOM05D006231 ORTHO05D007857 1.0e-81 307.8 227 66.1
BolC5t31019H Brassica oleracea HOM05D006231 ORTHO05D007857 1.0e-81 307.8 227 66.1
Prupe.1G258300 Prunus persica HOM05D006231 ORTHO05D007857 1.7e-81 307.0 252 63.9
Aqoxy3G00933 Aquilegia oxysepala HOM05D006231 ORTHO05D007857 2.9e-81 306.2 232 68.1
FAN07G0090 Fragaria x ananassa HOM05D006231 ORTHO05D007857 5.0e-81 305.4 307 58.0
Glyma.01G034200 Glycine max HOM05D006231 ORTHO05D007857 5.0e-81 305.4 220 69.5
AUR62013974 Chenopodium quinoa HOM05D006231 ORTHO05D007857 8.6e-81 304.7 306 57.5
Hund25325 Selenicereus undatus HOM05D006231 ORTHO05D007857 1.9e-80 303.5 215 72.1
unitig_22.g6476 Utricularia gibba HOM05D006231 ORTHO05D007857 4.3e-80 302.4 220 65.0
Potri.008G146000 Populus trichocarpa HOM05D006231 ORTHO05D007857 5.6e-80 302.0 250 62.4
FAN22G0458 Fragaria x ananassa HOM05D006231 ORTHO05D007857 7.3e-80 301.6 314 56.4
EL10Ac6g13629 Beta vulgaris HOM05D006231 ORTHO05D007857 9.5e-80 301.2 297 56.2
FAN17G2958 Fragaria x ananassa HOM05D006231 ORTHO05D007857 1.6e-79 300.4 307 57.7
MD16G1088300 Malus domestica HOM05D006231 ORTHO05D007857 1.6e-79 300.4 284 59.2
Peaxi162Scf00421g00419 Petunia axillaris HOM05D006231 ORTHO05D007857 2.1e-79 300.1 274 58.4
Psat2g109920 Pisum sativum HOM05D006231 ORTHO05D007857 2.1e-79 300.1 223 65.5
PSO478G5064 Papaver somniferum HOM05D006231 ORTHO05D007857 6.1e-79 298.5 215 68.4
PSO017G5161 Papaver somniferum HOM05D006231 ORTHO05D007857 1.0e-78 297.7 224 65.6
HanXRQChr08g0208971 Helianthus annuus HOM05D006231 ORTHO05D007857 1.4e-78 297.4 273 61.9
Lsat_1_v5_gn_8_158260 Lactuca sativa HOM05D006231 ORTHO05D007857 1.4e-78 297.4 274 59.5
Ah.03g132450 Amaranthus hybridus HOM05D006231 ORTHO05D007857 1.2e-77 294.3 242 60.7
A09p40810 Brassica napus HOM05D006231 ORTHO05D007857 2.6e-77 293.1 209 66.5
BraA09t39576Z Brassica rapa HOM05D006231 ORTHO05D007857 2.6e-77 293.1 209 66.5
Lj3A1049T58 Lonicera japonica HOM05D006231 ORTHO05D007857 3.4e-77 292.7 241 63.9
Sc11g0001330 Simmondsia chinensis HOM05D006231 ORTHO05D007857 3.4e-77 292.7 295 54.2
Glyma.02G032100 Glycine max HOM05D006231 ORTHO05D007857 1.7e-76 290.4 249 62.2
MD13G1088000 Malus domestica HOM05D006231 ORTHO05D007857 1.7e-76 290.4 328 55.2
Potri.010G095800 Populus trichocarpa HOM05D006231 ORTHO05D007857 2.9e-76 289.7 245 59.6
ECA233G1652 Erigeron canadensis HOM05D006231 ORTHO05D007857 3.7e-76 289.3 272 58.5
Ca_04621_v3 Cicer arietinum L. HOM05D006231 ORTHO05D007857 3.2e-75 286.2 214 64.0
TPR.G4354 Trifolium pratense HOM05D006231 ORTHO05D007857 2.0e-74 283.5 229 61.1
Medtr5g035060 Medicago truncatula HOM05D006231 ORTHO05D007857 1.3e-73 280.8 258 56.6
SGA_v2.0_scaffold166G38349 Striga asiatica HOM05D006231 ORTHO05D007857 5.0e-73 278.9 327 49.8
Phvul.002G073400 Phaseolus vulgaris HOM05D006231 ORTHO05D007857 1.5e-72 277.3 299 53.5
VMungo1215G3085 Vigna mungo HOM05D006231 ORTHO05D007857 3.3e-72 276.2 304 51.6
DCAR_024529 Daucus carota HOM05D006231 ORTHO05D007857 8.9e-70 268.1 191 68.6
Sabra10G0068400 Salix brachista HOM05D006231 ORTHO05D007857 1.2e-69 267.7 334 46.1
CDE10G0954 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 1.7e-65 253.8 271 53.1
Sabra08G0111000 Salix brachista HOM05D006231 ORTHO05D007857 9.5e-64 248.1 213 61.5
MBI15_g12952_MAGBIO Magnolia biondii HOM05D006231 ORTHO05D007857 1.6e-63 247.3 272 51.8
Gorai.005G184900 Gossypium raimondii HOM05D006231 ORTHO05D007857 3.4e-61 239.6 277 53.1
CDE10G0637 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 7.8e-58 228.4 193 61.7
HPP92_010904 Vanilla planifolia HOM05D006231 ORTHO05D007857 8.6e-57 224.9 213 56.3
ATR1149G099 Amborella trichopoda HOM05D006231 ORTHO05D007857 7.3e-56 221.9 178 61.8
Medtr5g035040 Medicago truncatula HOM05D006231 ORTHO05D007857 2.1e-55 220.3 210 56.7
SEGI_07841 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 2.4e-54 216.9 224 50.4
Solyc05g005890.2 Solanum lycopersicum HOM05D006231 ORTHO05D007857 6.8e-54 215.3 143 73.4
GSVIVG01020181001 Vitis vinifera HOM05D006231 ORTHO05D007857 1.1e-51 208.0 141 72.3
Zm00001eb424460 Zea mays HOM05D006231 ORTHO05D007857 2.5e-48 196.8 242 47.1
Os04g0465500 Oryza sativa ssp. japonica HOM05D006231 ORTHO05D007857 5.6e-48 195.7 229 48.9
Psat2g109880 Pisum sativum HOM05D006231 ORTHO05D007857 1.4e-46 191.0 154 59.1
SEGI_36756 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 4.0e-46 189.5 226 46.0
Gohir.A03G141850 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.5e-45 187.6 203 54.7
Zm00001eb348680 Zea mays HOM05D006231 ORTHO05D007857 1.3e-41 174.5 233 44.6
Pp3c2_6130 Physcomitrium patens HOM05D006231 ORTHO05D007857 8.1e-39 165.2 224 42.9
Pp3c2_6132 Physcomitrium patens HOM05D006231 ORTHO05D007857 8.1e-39 165.2 224 42.9
Mapoly0005s0071 Marchantia polymorpha HOM05D006231 ORTHO05D007857 6.9e-38 162.2 213 42.7
SMO365G0079 Selaginella moellendorffii HOM05D006231 ORTHO05D007857 1.3e-33 147.9 192 42.7
Dinv31098 Davidia involucrata HOM05D006231 ORTHO05D007857 1.1e-30 138.3 90 74.4
AagrBONN_evm.TU.Sc2ySwM_368.2752 Anthoceros agrestis HOM05D006231 ORTHO05D007857 5.6e-24 115.9 173 40.5
Medtr5g035050 Medicago truncatula HOM05D006231 ORTHO05D007857 4.8e-23 112.8 85 69.4
CBR_g40430 Chara braunii HOM05D017800 ORTHO05D019665 1.3e-20 104.8 211 32.2
TAR622G0489 Trochodendron aralioides HOM05D006231 ORTHO05D007857 1.9e-11 74.3 74 55.4
Cre10.g464750 Chlamydomonas reinhardtii HOM05D006231 ORTHO05D007857 2.8e-07 60.5 121 28.9


User provided reference genes

Program Settings