Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16198 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 1.7e-183 646.0 351 100.0
Rhsim12G0110600 Rhododendron simsii HOM05D006540 ORTHO05D008202 3.2e-150 535.4 356 85.4
Actinidia37429 Actinidia chinensis HOM05D006540 ORTHO05D008202 1.8e-124 449.9 351 70.7
Hma1.2p1_0223F.1_g093990 Hydrangea macrophylla HOM05D006540 ORTHO05D008202 1.3e-122 443.7 379 68.3
Actinidia15092 Actinidia chinensis HOM05D006540 ORTHO05D008202 1.0e-119 434.1 351 70.4
Atru.chr11.2104 Acer truncatum HOM05D006540 ORTHO05D008202 3.9e-119 432.2 351 67.2
ClCG05G025710 Citrullus lanatus HOM05D006540 ORTHO05D008202 4.3e-118 428.7 353 66.6
CiPaw.05G182700 Carya illinoinensis HOM05D006540 ORTHO05D008202 6.2e-117 424.9 353 68.3
Dinv24788 Davidia involucrata HOM05D006540 ORTHO05D008202 1.4e-116 423.7 355 69.6
SalBow2G2200 Salvia bowleyana HOM05D006540 ORTHO05D008202 1.8e-116 423.3 357 64.1
CSS0000303 Camellia sinensis var. sinensis HOM05D006540 ORTHO05D008202 8.9e-116 421.0 361 68.7
Cfa009208 Carpinus fangiana HOM05D006540 ORTHO05D008202 2.0e-115 419.9 354 68.4
MSTRG.568 Avicennia marina HOM05D006540 ORTHO05D008202 4.4e-115 418.7 354 64.4
Eucgr.B03288 Eucalyptus grandis HOM05D006540 ORTHO05D008202 7.6e-115 417.9 357 68.9
Ciclev10032003m.g Citrus clementina HOM05D006540 ORTHO05D008202 9.9e-115 417.5 351 69.2
Lj6A811T79 Lonicera japonica HOM05D006540 ORTHO05D008202 9.9e-115 417.5 360 68.1
Oeu059907.1 Olea europaea HOM05D006540 ORTHO05D008202 3.7e-114 415.6 362 68.2
PGR102G2745 Punica granatum HOM05D006540 ORTHO05D008202 5.4e-113 411.8 353 66.9
MD16G1102400 Malus domestica HOM05D006540 ORTHO05D008202 3.5e-112 409.1 357 62.5
Migut.K00595 Erythranthe guttata HOM05D006540 ORTHO05D008202 6.0e-112 408.3 355 62.8
Duzib268G1404 Durio zibethinus HOM05D006540 ORTHO05D008202 5.1e-111 405.2 354 64.7
Gorai.002G186600 Gossypium raimondii HOM05D006540 ORTHO05D008202 7.3e-110 401.4 357 67.8
MD13G1101900 Malus domestica HOM05D006540 ORTHO05D008202 9.6e-110 401.0 357 61.9
TAR622G1382 Trochodendron aralioides HOM05D006540 ORTHO05D008202 9.6e-110 401.0 358 64.2
Gohir.D01G150500 Gossypium hirsutum HOM05D006540 ORTHO05D008202 8.1e-109 397.9 357 67.5
RcHm_v2.0_Chr4g0432921 Rosa chinensis HOM05D006540 ORTHO05D008202 8.1e-109 397.9 358 60.3
PGSC0003DMG400018605 Solanum tuberosum HOM05D006540 ORTHO05D008202 1.1e-108 397.5 362 64.4
Manes.13G024900 Manihot esculenta HOM05D006540 ORTHO05D008202 2.4e-108 396.4 351 67.2
Nitab4.5_0000007g0060 Nicotiana tabacum HOM05D006540 ORTHO05D008202 2.4e-108 396.4 360 64.7
Cpa.g.sc33.16 Carica papaya HOM05D006540 ORTHO05D008202 8.9e-108 394.4 353 62.0
Prupe.1G243900 Prunus persica HOM05D006540 ORTHO05D008202 1.2e-107 394.0 357 63.3
Nitab4.5_0003628g0010 Nicotiana tabacum HOM05D006540 ORTHO05D008202 4.4e-107 392.1 360 64.4
Phvul.003G064400 Phaseolus vulgaris HOM05D006540 ORTHO05D008202 4.9e-106 388.7 357 60.8
vmacro01127 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 4.9e-106 388.7 354 65.3
Thhalv10004491m.g Eutrema salsugineum HOM05D006540 ORTHO05D008202 1.9e-105 386.7 364 60.4
FAN07G1259 Fragaria x ananassa HOM05D006540 ORTHO05D008202 2.4e-105 386.3 361 59.8
TWI18G0987 Tripterygium wilfordii HOM05D006540 ORTHO05D008202 2.4e-105 386.3 359 64.9
DCAR_024432 Daucus carota HOM05D006540 ORTHO05D008202 4.2e-105 385.6 336 67.0
C07p35560 Brassica napus HOM05D006540 ORTHO05D008202 5.4e-105 385.2 359 62.7
BolC7t44080H Brassica oleracea HOM05D006540 ORTHO05D008202 5.4e-105 385.2 359 62.7
Aa31LG2G5960 Aethionema arabicum HOM05D006540 ORTHO05D008202 7.1e-105 384.8 360 58.9
arahy.Tifrunner.gnm1.ann1.LD9JWE Arachis hypogaea HOM05D006540 ORTHO05D008202 7.1e-105 384.8 362 63.8
QL03p058139 Quercus lobata HOM05D006540 ORTHO05D008202 7.1e-105 384.8 408 57.8
BcaC06g33900 Brassica carinata HOM05D006540 ORTHO05D008202 9.3e-105 384.4 359 61.6
Duzib248G0112 Durio zibethinus HOM05D006540 ORTHO05D008202 1.2e-104 384.0 353 66.3
arahy.Tifrunner.gnm1.ann1.NX3C69 Arachis hypogaea HOM05D006540 ORTHO05D008202 1.6e-104 383.6 362 63.5
A06p41910 Brassica napus HOM05D006540 ORTHO05D008202 2.1e-104 383.3 359 61.8
BraA06t27110Z Brassica rapa HOM05D006540 ORTHO05D008202 2.1e-104 383.3 359 61.8
Glyma.17G134500 Glycine max HOM05D006540 ORTHO05D008202 6.0e-104 381.7 351 62.7
FAN22G2305 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.0e-103 380.9 361 58.4
CANSAT35G0572 Cannabis sativa HOM05D006540 ORTHO05D008202 1.3e-103 380.6 356 61.2
Lj4g0023216 Lotus japonicus HOM05D006540 ORTHO05D008202 5.1e-103 378.6 352 62.8
Sp2g15690 Schrenkiella parvula HOM05D006540 ORTHO05D008202 5.1e-103 378.6 360 58.3
FvH4_4g25530 Fragaria vesca HOM05D006540 ORTHO05D008202 6.6e-103 378.3 361 57.9
FAN12G0822 Fragaria x ananassa HOM05D006540 ORTHO05D008202 6.6e-103 378.3 361 57.9
CARHR147570 Cardamine hirsuta HOM05D006540 ORTHO05D008202 1.5e-102 377.1 364 59.1
Sopen05g008320 Solanum pennellii HOM05D006540 ORTHO05D008202 1.5e-102 377.1 363 63.4
FAN17G1845 Fragaria x ananassa HOM05D006540 ORTHO05D008202 2.5e-102 376.3 361 57.9
Cc11_g15700 Coffea canephora HOM05D006540 ORTHO05D008202 7.3e-102 374.8 361 59.3
Haze_12245 Corylus avellana HOM05D006540 ORTHO05D008202 2.8e-101 372.9 373 62.2
Peaxi162Scf00128g00138 Petunia axillaris HOM05D006540 ORTHO05D008202 2.8e-101 372.9 363 62.8
Thecc.02G259400 Theobroma cacao HOM05D006540 ORTHO05D008202 4.8e-101 372.1 354 65.8
AT3G26580 Arabidopsis thaliana HOM05D006540 ORTHO05D008202 6.2e-101 371.7 357 58.3
AL5G15370 Arabidopsis lyrata HOM05D006540 ORTHO05D008202 8.1e-101 371.3 357 58.5
Gohir.A01G159600 Gossypium hirsutum HOM05D006540 ORTHO05D008202 1.4e-100 370.5 353 63.5
Aqoxy3G01202 Aquilegia oxysepala HOM05D006540 ORTHO05D008202 3.4e-99 365.9 359 62.1
THA.LOC104825662 Tarenaya hassleriana HOM05D006540 ORTHO05D008202 9.9e-99 364.4 352 61.4
Carub.0005s0457 Capsella rubella HOM05D006540 ORTHO05D008202 2.9e-98 362.8 357 58.5
CAN.G832.5 Capsicum annuum HOM05D006540 ORTHO05D008202 8.4e-98 361.3 361 62.3
Potri.013G090000 Populus trichocarpa HOM05D006540 ORTHO05D008202 9.3e-97 357.8 323 64.1
Medtr8g069450 Medicago truncatula HOM05D006540 ORTHO05D008202 4.6e-96 355.5 353 60.9
BcaC06g31063 Brassica carinata HOM05D006540 ORTHO05D008202 6.0e-96 355.1 358 56.4
Sabra13G0070200 Salix brachista HOM05D006540 ORTHO05D008202 7.8e-96 354.8 298 67.1
ECA233G5619 Erigeron canadensis HOM05D006540 ORTHO05D008202 5.1e-95 352.1 286 72.4
Lalb_Chr05g0228421 Lupinus albus HOM05D006540 ORTHO05D008202 1.3e-93 347.4 351 60.7
Lsat_1_v5_gn_8_152220 Lactuca sativa HOM05D006540 ORTHO05D008202 2.1e-93 346.7 363 59.5
EL10Ac6g13801 Beta vulgaris HOM05D006540 ORTHO05D008202 6.2e-93 345.1 359 56.8
COL.COLO4_24263 Corchorus olitorius HOM05D006540 ORTHO05D008202 1.4e-92 344.0 353 55.0
Ca_22583_v3 Cicer arietinum L. HOM05D006540 ORTHO05D008202 3.1e-92 342.8 352 58.0
CDE09G1037 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 6.9e-92 341.7 351 60.4
GSVIVG01004073001 Vitis vinifera HOM05D006540 ORTHO05D008202 4.5e-91 339.0 196 83.2
ATR0686G190 Amborella trichopoda HOM05D006540 ORTHO05D008202 5.8e-91 338.6 297 61.3
unitig_21.g20872 Utricularia gibba HOM05D006540 ORTHO05D008202 5.8e-91 338.6 355 54.9
Rhsim12G0041000 Rhododendron simsii HOM05D006540 ORTHO05D008202 9.9e-91 337.8 435 52.0
HanXRQChr08g0208131 Helianthus annuus HOM05D006540 ORTHO05D008202 1.3e-90 337.4 370 60.0
Sc04g0009450 Simmondsia chinensis HOM05D006540 ORTHO05D008202 1.3e-90 337.4 356 58.7
Nn4g22628 Nelumbo nucifera HOM05D006540 ORTHO05D008202 8.4e-90 334.7 193 82.9
PSO017G4849 Papaver somniferum HOM05D006540 ORTHO05D008202 1.4e-89 334.0 368 54.1
CDE02G2769 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 9.3e-89 331.3 357 57.7
Psat4g116680 Pisum sativum HOM05D006540 ORTHO05D008202 1.0e-87 327.8 361 55.4
Ah.03g133040 Amaranthus hybridus HOM05D006540 ORTHO05D008202 6.9e-84 315.1 245 66.9
PSO478G4529 Papaver somniferum HOM05D006540 ORTHO05D008202 2.6e-83 313.2 341 59.8
MBI10_g13027_MAGBIO Magnolia biondii HOM05D006540 ORTHO05D008202 1.3e-82 310.8 399 53.9
AUR62024282 Chenopodium quinoa HOM05D006540 ORTHO05D008202 1.1e-78 297.7 362 52.2
AUR62005459 Chenopodium quinoa HOM05D006540 ORTHO05D008202 1.5e-78 297.4 196 73.5
TPR.G17765 Trifolium pratense HOM05D006540 ORTHO05D008202 1.3e-74 284.3 356 51.1
VMungo0251G1250 Vigna mungo HOM05D006540 ORTHO05D008202 8.4e-74 281.6 284 59.5
HPP92_002022 Vanilla planifolia HOM05D006540 ORTHO05D008202 1.6e-72 277.3 287 57.8
MELO3C011955.2 Cucumis melo HOM05D006540 ORTHO05D008202 7.9e-72 275.0 285 58.6
CsaV3_5G031170 Cucumis sativus L. HOM05D006540 ORTHO05D008202 1.8e-71 273.9 285 58.2
Sed0005489 Sechium edule HOM05D006540 ORTHO05D008202 1.5e-67 260.8 282 55.0
BcaB01g00564 Brassica carinata HOM05D006540 ORTHO05D008202 2.7e-64 250.0 247 57.5
Os03g0428800 Oryza sativa ssp. japonica HOM05D006540 ORTHO05D008202 1.4e-63 247.7 201 62.7
Zm00001eb096140 Zea mays HOM05D006540 ORTHO05D008202 2.0e-62 243.8 265 59.2
TAR374G0845 Trochodendron aralioides HOM05D006540 ORTHO05D008202 4.3e-62 242.7 287 57.8
AagrBONN_evm.TU.Sc2ySwM_340.367 Anthoceros agrestis HOM05D006540 ORTHO05D008202 4.4e-54 216.1 246 46.3
Mapoly0037s0067 Marchantia polymorpha HOM05D006540 ORTHO05D008202 2.8e-53 213.4 256 46.9
SEGI_37038 Sequoiadendron giganteum HOM05D006540 ORTHO05D008202 2.6e-51 206.8 173 55.5
Pp3c27_6670 Physcomitrium patens HOM05D006540 ORTHO05D008202 8.8e-47 191.8 193 49.7
SMO347G0417 Selaginella moellendorffii HOM05D006540 ORTHO05D008202 2.4e-44 183.7 308 39.6
BcaC06g33898 Brassica carinata HOM05D006540 ORTHO05D008202 1.1e-25 121.7 82 65.9
Cre12.g528050 Chlamydomonas reinhardtii HOM05D006540 ORTHO05D008202 4.1e-20 103.2 147 38.1
CBR_g8379 Chara braunii HOM05D006540 ORTHO05D008202 1.2e-19 101.7 133 43.6
MCO07G599 Micromonas commoda HOM05D006540 ORTHO05D008202 1.6e-19 101.3 195 34.9
Oeu029879.1 Olea europaea HOM05D006540 ORTHO05D008202 3.5e-19 100.1 72 63.9
RcHm_v2.0_Chr5g0067811 Rosa chinensis HOM05D006540 ORTHO05D008202 1.2e-16 91.7 61 78.7
PRCOL_00004949 Prasinoderma coloniale HOM05D006540 ORTHO05D008202 1.6e-16 91.3 191 30.9
Solyc05g013480.4 Solanum lycopersicum HOM05D006540 ORTHO05D008202 5.2e-15 86.3 199 47.7
QL04p066147 Quercus lobata HOM05D006540 ORTHO05D008202 1.5e-14 84.7 52 86.5
unitig_744.g24293 Utricularia gibba HOM05D006540 ORTHO05D008202 3.6e-08 63.5 44 59.1
TAR625G0150 Trochodendron aralioides HOM05D006540 ORTHO05D008202 8.1e-08 62.4 101 40.6


User provided reference genes

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