Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16173 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 5.6e-150 534.3 273 100.0
Rhsim12G0108000 Rhododendron simsii HOM05D003570 ORTHO05D004207 2.2e-101 372.9 263 75.3
vmacro16171 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 8.2e-101 370.9 264 76.9
Actinidia37450 Actinidia chinensis HOM05D003570 ORTHO05D004207 8.9e-79 297.7 269 61.7
vmacro17618 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 5.6e-73 278.5 254 60.6
Dinv15203 Davidia involucrata HOM05D003570 ORTHO05D004207 5.2e-71 271.9 257 58.0
Hma1.2p1_1533F.1_g289360 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 2.5e-65 253.1 250 54.8
Haze_12279 Corylus avellana HOM05D003570 ORTHO05D004207 7.3e-65 251.5 260 54.2
Thecc.02G265200 Theobroma cacao HOM05D003570 ORTHO05D004207 1.2e-62 244.2 260 53.8
COL.COLO4_23499 Corchorus olitorius HOM05D003570 ORTHO05D004207 1.5e-62 243.8 253 54.9
Sopen05g008710 Solanum pennellii HOM05D003570 ORTHO05D004207 3.4e-62 242.7 266 51.9
Duzib248G0757 Durio zibethinus HOM05D003570 ORTHO05D004207 5.8e-62 241.9 260 53.1
DCAR_026498 Daucus carota HOM05D003570 ORTHO05D004207 9.8e-62 241.1 232 57.3
TAR622G0746 Trochodendron aralioides HOM05D003570 ORTHO05D004207 9.8e-62 241.1 256 53.9
Gohir.D04G180400 Gossypium hirsutum HOM05D003570 ORTHO05D004207 2.9e-61 239.6 255 52.5
Gorai.012G173500 Gossypium raimondii HOM05D003570 ORTHO05D004207 2.9e-61 239.6 255 52.5
Gohir.A04G137200 Gossypium hirsutum HOM05D003570 ORTHO05D004207 4.9e-61 238.8 255 52.5
PGSC0003DMG400016968 Solanum tuberosum HOM05D003570 ORTHO05D004207 4.9e-61 238.8 266 51.1
Manes.13G020900 Manihot esculenta HOM05D003570 ORTHO05D004207 1.9e-60 236.9 252 53.2
Lj6A815G40 Lonicera japonica HOM05D003570 ORTHO05D004207 2.4e-60 236.5 271 50.2
Ciclev10030923m.g Citrus clementina HOM05D003570 ORTHO05D004207 4.1e-60 235.7 263 51.3
Peaxi162Scf00128g00550 Petunia axillaris HOM05D003570 ORTHO05D004207 5.4e-60 235.3 264 51.1
Lj3A151T25 Lonicera japonica HOM05D003570 ORTHO05D004207 7.1e-60 235.0 266 50.4
Sabra08G0139700 Salix brachista HOM05D003570 ORTHO05D004207 1.6e-59 233.8 236 55.1
Nitab4.5_0004117g0010 Nicotiana tabacum HOM05D003570 ORTHO05D004207 2.1e-59 233.4 247 52.2
Potri.008G183500 Populus trichocarpa HOM05D003570 ORTHO05D004207 2.1e-59 233.4 252 52.4
CiPaw.06G064800 Carya illinoinensis HOM05D003570 ORTHO05D004207 6.0e-59 231.9 262 50.8
Nitab4.5_0002373g0110 Nicotiana tabacum HOM05D003570 ORTHO05D004207 1.0e-58 231.1 265 50.2
Nn4g22548 Nelumbo nucifera HOM05D003570 ORTHO05D004207 2.3e-58 229.9 273 51.3
Oeu038645.2 Olea europaea HOM05D003570 ORTHO05D004207 5.1e-58 228.8 246 53.7
Prupe.1G241900 Prunus persica HOM05D003570 ORTHO05D004207 5.1e-58 228.8 242 53.7
Sed0006332 Sechium edule HOM05D003570 ORTHO05D004207 1.5e-57 227.3 261 48.3
CAN.G1572.8 Capsicum annuum HOM05D003570 ORTHO05D004207 2.5e-57 226.5 243 52.3
Lalb_Chr08g0230861 Lupinus albus HOM05D003570 ORTHO05D004207 7.3e-57 224.9 238 52.5
Phvul.001G256000 Phaseolus vulgaris HOM05D003570 ORTHO05D004207 7.3e-57 224.9 236 52.1
arahy.Tifrunner.gnm1.ann1.I1BHDP Arachis hypogaea HOM05D003570 ORTHO05D004207 9.5e-57 224.6 235 52.8
Migut.K00625 Erythranthe guttata HOM05D003570 ORTHO05D004207 9.5e-57 224.6 245 52.2
arahy.Tifrunner.gnm1.ann1.8897EQ Arachis hypogaea HOM05D003570 ORTHO05D004207 1.2e-56 224.2 235 52.8
Sc04g0009680 Simmondsia chinensis HOM05D003570 ORTHO05D004207 1.2e-56 224.2 252 49.2
EL10As2g23162 Beta vulgaris HOM05D003570 ORTHO05D004207 2.1e-56 223.4 253 49.4
GSVIVG01000572001 Vitis vinifera HOM05D003570 ORTHO05D004207 2.1e-56 223.4 258 50.8
PGR102G1250 Punica granatum HOM05D003570 ORTHO05D004207 3.6e-56 222.6 267 47.9
Cpa.g.sc13.88 Carica papaya HOM05D003570 ORTHO05D004207 6.2e-56 221.9 243 51.4
VMungo1383G2895 Vigna mungo HOM05D003570 ORTHO05D004207 6.2e-56 221.9 236 51.7
Eucgr.B03244 Eucalyptus grandis HOM05D003570 ORTHO05D004207 1.1e-55 221.1 260 46.2
Cc11_g16040 Coffea canephora HOM05D003570 ORTHO05D004207 3.1e-55 219.5 235 50.2
CANSAT11G1164 Cannabis sativa HOM05D003570 ORTHO05D004207 6.8e-55 218.4 232 51.7
AUR62024231 Chenopodium quinoa HOM05D003570 ORTHO05D004207 6.8e-55 218.4 252 49.6
QL03p056574 Quercus lobata HOM05D003570 ORTHO05D004207 6.8e-55 218.4 257 49.8
Ca_25131_v3 Cicer arietinum L. HOM05D001269 ORTHO05D001083 8.9e-55 218.0 241 47.7
CsaV3_5G030790 Cucumis sativus L. HOM05D003570 ORTHO05D004207 1.2e-54 217.6 262 48.9
Glyma.11G244100 Glycine max HOM05D003570 ORTHO05D004207 1.2e-54 217.6 236 50.8
AUR62005511 Chenopodium quinoa HOM05D003570 ORTHO05D004207 2.6e-54 216.5 252 48.8
Lsat_1_v5_gn_0_32260 Lactuca sativa HOM05D003570 ORTHO05D004207 2.6e-54 216.5 235 48.5
Oeu038646.1 Olea europaea HOM05D003570 ORTHO05D004207 4.4e-54 215.7 246 51.6
HanXRQChr08g0208421 Helianthus annuus HOM05D003570 ORTHO05D004207 5.8e-54 215.3 259 46.3
Lj4g0018208 Lotus japonicus HOM05D003570 ORTHO05D004207 5.8e-54 215.3 239 51.0
PSO063G4933 Papaver somniferum HOM05D003570 ORTHO05D004207 5.8e-54 215.3 254 49.6
MSTRG.553 Avicennia marina HOM05D003570 ORTHO05D004207 7.5e-54 214.9 243 51.4
QL03p056953 Quercus lobata HOM05D003570 ORTHO05D004207 7.5e-54 214.9 239 50.2
THA.LOC104805269 Tarenaya hassleriana HOM05D003570 ORTHO05D004207 7.5e-54 214.9 242 45.5
MD13G1104500 Malus domestica HOM05D003570 ORTHO05D004207 9.9e-54 214.5 260 49.2
TWI36G1196 Tripterygium wilfordii HOM05D003570 ORTHO05D004207 1.3e-53 214.2 242 50.8
COL.COLO4_27904 Corchorus olitorius HOM05D003570 ORTHO05D004207 1.7e-53 213.8 238 51.3
PSO339G2835 Papaver somniferum HOM05D003570 ORTHO05D004207 2.2e-53 213.4 254 49.2
SGA_v2.0_scaffold22G09799 Striga asiatica HOM05D003570 ORTHO05D004207 2.2e-53 213.4 243 49.8
Lj6g0027950 Lotus japonicus HOM05D003570 ORTHO05D004207 2.9e-53 213.0 227 51.5
Nitab4.5_0001978g0070 Nicotiana tabacum HOM05D003570 ORTHO05D004207 4.9e-53 212.2 270 47.4
PSO754G0035 Papaver somniferum HOM05D003570 ORTHO05D004207 4.9e-53 212.2 275 46.2
Psat5g092360 Pisum sativum HOM05D003570 ORTHO05D004207 1.1e-52 211.1 241 47.3
MELO3C011924.2 Cucumis melo HOM05D003570 ORTHO05D004207 2.4e-52 209.9 262 47.3
RcHm_v2.0_Chr4g0432651 Rosa chinensis HOM05D003570 ORTHO05D004207 2.4e-52 209.9 242 49.2
ECA233G5166 Erigeron canadensis HOM05D002671 ORTHO05D002985 3.2e-52 209.5 256 45.3
Medtr3g086460 Medicago truncatula HOM05D003570 ORTHO05D004207 5.4e-52 208.8 246 46.7
ClCG05G026050 Citrullus lanatus HOM05D003570 ORTHO05D004207 1.2e-51 207.6 260 46.9
PSO063G1535 Papaver somniferum HOM05D003570 ORTHO05D004207 1.2e-51 207.6 256 48.0
FAN07G1326 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.3e-50 204.1 242 47.9
TPR.G35967 Trifolium pratense HOM05D003570 ORTHO05D004207 3.0e-50 203.0 245 45.7
FvH4_4g25360 Fragaria vesca HOM05D003570 ORTHO05D004207 3.9e-50 202.6 242 47.5
FAN12G2286 Fragaria x ananassa HOM05D003570 ORTHO05D004207 5.1e-50 202.2 242 47.5
FAN17G0862 Fragaria x ananassa HOM05D003570 ORTHO05D004207 5.1e-50 202.2 242 47.5
FAN22G0389 Fragaria x ananassa HOM05D003570 ORTHO05D004207 6.6e-50 201.8 242 47.5
MBI04_g13681_MAGBIO Magnolia biondii HOM05D003570 ORTHO05D004207 5.6e-49 198.7 243 46.5
Aqoxy5G03688 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 8.9e-47 191.4 243 46.5
Aqoxy7G03799 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 8.9e-47 191.4 243 46.5
CSS0045431 Camellia sinensis var. sinensis HOM05D003570 ORTHO05D004207 4.4e-46 189.1 172 59.9
Haze_11814 Corylus avellana HOM05D001314 ORTHO05D001165 4.4e-46 189.1 251 47.4
ATR0824G009 Amborella trichopoda HOM05D003570 ORTHO05D004207 2.2e-45 186.8 246 43.1
CDE06G1553 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 3.2e-44 183.0 209 45.9
PSO063G3251 Papaver somniferum HOM05D003570 ORTHO05D004207 9.3e-44 181.4 260 43.8
SEGI_05718 Sequoiadendron giganteum HOM05D003570 ORTHO05D004207 1.3e-42 177.6 234 41.9
Aqoxy1G03220 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 1.5e-41 174.1 242 45.9
Pp3c9_21420 Physcomitrium patens HOM05D003570 ORTHO05D004207 3.3e-41 172.9 228 40.8
Atru.chr11.2174 Acer truncatum HOM05D003570 ORTHO05D004207 7.3e-41 171.8 260 41.5
Zm00001eb212370 Zea mays HOM05D003570 ORTHO05D004207 9.6e-41 171.4 232 44.0
Zm00001eb062020 Zea mays HOM05D003570 ORTHO05D004207 6.2e-40 168.7 232 43.1
Os02g0596100 Oryza sativa ssp. japonica HOM05D003570 ORTHO05D004207 1.4e-39 167.5 232 43.5
SHI04269 Sapria himalayana HOM05D003570 ORTHO05D004207 1.4e-39 167.5 230 41.7
CBR_g38118 Chara braunii HOM05D003570 ORTHO05D004207 4.4e-38 162.5 227 40.5
Haze_20779 Corylus avellana HOM05D003570 ORTHO05D004207 4.4e-38 162.5 153 58.2
Mapoly0004s0250 Marchantia polymorpha HOM05D003570 ORTHO05D004207 2.2e-37 160.2 248 36.3
unitig_22.g6426 Utricularia gibba HOM05D003570 ORTHO05D004207 2.9e-37 159.8 196 43.9
Aa31LG1G1680 Aethionema arabicum HOM05D003570 ORTHO05D004207 1.7e-34 150.6 250 39.6
AL1G24790 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 3.6e-32 142.9 227 37.4
Thhalv10007079m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 1.1e-31 141.4 244 36.1
Sp1g11650 Schrenkiella parvula HOM05D003570 ORTHO05D004207 1.1e-31 141.4 248 33.5
BcaC07g41664 Brassica carinata HOM05D003570 ORTHO05D004207 1.4e-31 141.0 254 35.0
BolC8t52217H Brassica oleracea HOM05D003570 ORTHO05D004207 1.8e-31 140.6 254 35.0
A09p63350 Brassica napus HOM05D003570 ORTHO05D004207 2.4e-31 140.2 254 35.0
C08p46780 Brassica napus HOM05D003570 ORTHO05D004207 2.4e-31 140.2 254 35.0
BraA09t41684Z Brassica rapa HOM05D003570 ORTHO05D004207 2.4e-31 140.2 254 35.0
AT1G13120 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 4.0e-31 139.4 227 36.1
Carub.0001s1286 Capsella rubella HOM05D003570 ORTHO05D004207 4.0e-31 139.4 243 36.6
Sopen04g013730 Solanum pennellii HOM05D003570 ORTHO05D004207 4.0e-31 139.4 142 50.7
EL10Ac8g19584 Beta vulgaris HOM05D003570 ORTHO05D004207 7.6e-30 135.2 143 51.7
CARHR013490 Cardamine hirsuta HOM05D003570 ORTHO05D004207 2.9e-29 133.3 253 35.2
AagrBONN_evm.TU.Sc2ySwM_362.2178 Anthoceros agrestis HOM05D003570 ORTHO05D004207 5.4e-28 129.0 198 34.3
SMO367G0645 Selaginella moellendorffii HOM05D003570 ORTHO05D004207 7.9e-27 125.2 239 33.9
Thhalv10001133m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 1.5e-25 120.9 229 36.2
MCO05G059 Micromonas commoda HOM05D003570 ORTHO05D004207 3.1e-23 113.2 254 30.3
Hma1.2p1_0054F.1_g030990 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 3.4e-22 109.8 121 47.1
TAR374G0522 Trochodendron aralioides HOM05D003570 ORTHO05D004207 2.9e-21 106.7 99 59.6
Cre06.g300900 Chlamydomonas reinhardtii HOM05D003570 ORTHO05D004207 4.9e-21 105.9 231 29.4
Medtr7g034350 Medicago truncatula HOM05D003570 ORTHO05D004207 8.4e-21 105.1 217 33.2
Actinidia15111 Actinidia chinensis HOM05D003570 ORTHO05D004207 1.0e-18 98.2 75 70.7
Actinidia15112 Actinidia chinensis HOM05D003570 ORTHO05D004207 8.7e-18 95.1 81 63.0
FAN08G3485 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.5e-17 94.4 103 49.5
AL2G22720 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 2.5e-17 93.6 168 38.7
AL6G47680 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 1.3e-16 91.3 234 30.3
Glyma.18G013000 Glycine max HOM05D003570 ORTHO05D004207 2.4e-15 87.0 86 54.7
PRCOL_00001147 Prasinoderma coloniale HOM05D003570 ORTHO05D004207 2.6e-14 83.6 245 27.3
BolC5t29767H Brassica oleracea HOM05D003570 ORTHO05D004207 2.5e-12 77.0 218 28.0
CiPaw.02G032100 Carya illinoinensis HOM05D003570 ORTHO05D004207 2.5e-12 77.0 257 28.8
Sp2g10400 Schrenkiella parvula HOM05D003570 ORTHO05D004207 2.7e-11 73.6 123 34.1
FAN13G1935 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.3e-10 71.2 62 54.8
FAN08G0154 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.8e-10 70.9 60 53.3
BcaC05g25084 Brassica carinata HOM05D003570 ORTHO05D004207 3.0e-10 70.1 212 27.8
FvH4_5g15750 Fragaria vesca HOM05D003570 ORTHO05D004207 4.3e-09 66.2 90 45.6
MD05G1151500 Malus domestica HOM05D003570 ORTHO05D004207 1.4e-07 61.2 78 50.0
C05p10220 Brassica napus HOM05D003570 ORTHO05D004207 1.2e-06 58.2 97 28.9


User provided reference genes

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