Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16171 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 2.6e-158 562.0 281 100.0
Rhsim12G0108000 Rhododendron simsii HOM05D003570 ORTHO05D004207 3.2e-108 395.6 263 78.7
vmacro16173 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 3.8e-101 372.1 264 76.9
Actinidia37450 Actinidia chinensis HOM05D003570 ORTHO05D004207 2.2e-88 329.7 262 66.8
vmacro17618 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 1.7e-85 320.1 265 64.9
Sopen05g008710 Solanum pennellii HOM05D003570 ORTHO05D004207 2.1e-75 286.6 258 57.4
Peaxi162Scf00128g00550 Petunia axillaris HOM05D003570 ORTHO05D004207 1.8e-74 283.5 258 57.0
PGSC0003DMG400016968 Solanum tuberosum HOM05D003570 ORTHO05D004207 6.8e-74 281.6 258 56.6
Haze_12279 Corylus avellana HOM05D003570 ORTHO05D004207 1.5e-73 280.4 246 61.0
Hma1.2p1_1533F.1_g289360 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 3.4e-73 279.3 259 56.4
Duzib248G0757 Durio zibethinus HOM05D003570 ORTHO05D004207 4.4e-73 278.9 261 55.2
Ciclev10030923m.g Citrus clementina HOM05D003570 ORTHO05D004207 7.5e-73 278.1 261 56.3
Nitab4.5_0002373g0110 Nicotiana tabacum HOM05D003570 ORTHO05D004207 7.5e-73 278.1 256 56.2
TAR622G0746 Trochodendron aralioides HOM05D003570 ORTHO05D004207 1.7e-72 276.9 268 57.5
Potri.008G183500 Populus trichocarpa HOM05D003570 ORTHO05D004207 6.3e-72 275.0 251 58.6
Thecc.02G265200 Theobroma cacao HOM05D003570 ORTHO05D004207 6.3e-72 275.0 259 56.0
Gohir.D04G180400 Gossypium hirsutum HOM05D003570 ORTHO05D004207 8.3e-72 274.6 258 57.0
Gorai.012G173500 Gossypium raimondii HOM05D003570 ORTHO05D004207 8.3e-72 274.6 258 57.0
Dinv15203 Davidia involucrata HOM05D003570 ORTHO05D004207 1.1e-71 274.2 233 62.2
CAN.G1572.8 Capsicum annuum HOM05D003570 ORTHO05D004207 3.1e-71 272.7 251 56.6
Nn4g22548 Nelumbo nucifera HOM05D003570 ORTHO05D004207 4.1e-71 272.3 265 57.4
COL.COLO4_23499 Corchorus olitorius HOM05D003570 ORTHO05D004207 2.7e-70 269.6 251 57.4
Prupe.1G241900 Prunus persica HOM05D003570 ORTHO05D004207 3.5e-70 269.2 241 59.8
Manes.13G020900 Manihot esculenta HOM05D003570 ORTHO05D004207 7.7e-70 268.1 253 58.1
Lj6A815G40 Lonicera japonica HOM05D003570 ORTHO05D004207 1.7e-69 266.9 263 54.8
Gohir.A04G137200 Gossypium hirsutum HOM05D003570 ORTHO05D004207 2.3e-69 266.5 260 56.2
Lj3A151T25 Lonicera japonica HOM05D003570 ORTHO05D004207 2.3e-69 266.5 263 54.8
DCAR_026498 Daucus carota HOM05D003570 ORTHO05D004207 1.1e-68 264.2 225 61.3
Oeu038645.2 Olea europaea HOM05D003570 ORTHO05D004207 1.1e-68 264.2 238 58.8
Sabra08G0139700 Salix brachista HOM05D003570 ORTHO05D004207 2.5e-68 263.1 248 58.9
Nitab4.5_0001978g0070 Nicotiana tabacum HOM05D003570 ORTHO05D004207 5.5e-68 261.9 264 53.0
PGR102G1250 Punica granatum HOM05D003570 ORTHO05D004207 5.5e-68 261.9 260 53.5
Eucgr.B03244 Eucalyptus grandis HOM05D003570 ORTHO05D004207 2.8e-67 259.6 259 51.4
arahy.Tifrunner.gnm1.ann1.I1BHDP Arachis hypogaea HOM05D003570 ORTHO05D004207 4.7e-67 258.8 237 57.8
AUR62005511 Chenopodium quinoa HOM05D003570 ORTHO05D004207 4.7e-67 258.8 259 54.4
Migut.K00625 Erythranthe guttata HOM05D003570 ORTHO05D004207 4.7e-67 258.8 243 56.8
arahy.Tifrunner.gnm1.ann1.8897EQ Arachis hypogaea HOM05D003570 ORTHO05D004207 6.1e-67 258.5 237 57.8
AUR62024231 Chenopodium quinoa HOM05D003570 ORTHO05D004207 6.1e-67 258.5 255 54.9
GSVIVG01000572001 Vitis vinifera HOM05D003570 ORTHO05D004207 6.1e-67 258.5 266 54.9
MSTRG.553 Avicennia marina HOM05D003570 ORTHO05D004207 8.0e-67 258.1 239 57.7
CiPaw.06G064800 Carya illinoinensis HOM05D003570 ORTHO05D004207 1.4e-66 257.3 236 57.2
Sc04g0009680 Simmondsia chinensis HOM05D003570 ORTHO05D004207 1.8e-66 256.9 265 51.7
Lalb_Chr08g0230861 Lupinus albus HOM05D003570 ORTHO05D004207 2.3e-66 256.5 238 57.1
Sed0006332 Sechium edule HOM05D003570 ORTHO05D004207 3.0e-66 256.1 260 51.2
TWI36G1196 Tripterygium wilfordii HOM05D003570 ORTHO05D004207 3.0e-66 256.1 242 56.2
VMungo1383G2895 Vigna mungo HOM05D003570 ORTHO05D004207 4.0e-66 255.8 236 56.4
Nitab4.5_0004117g0010 Nicotiana tabacum HOM05D003570 ORTHO05D004207 1.2e-65 254.2 250 53.6
Phvul.001G256000 Phaseolus vulgaris HOM05D003570 ORTHO05D004207 2.0e-65 253.4 236 56.4
PSO754G0035 Papaver somniferum HOM05D003570 ORTHO05D004207 3.4e-65 252.7 264 51.1
Cpa.g.sc13.88 Carica papaya HOM05D003570 ORTHO05D004207 7.5e-65 251.5 242 55.4
Ca_25131_v3 Cicer arietinum L. HOM05D001269 ORTHO05D001083 7.5e-65 251.5 240 53.3
PSO063G4933 Papaver somniferum HOM05D003570 ORTHO05D004207 7.5e-65 251.5 243 54.7
ClCG05G026050 Citrullus lanatus HOM05D003570 ORTHO05D004207 1.7e-64 250.4 259 51.4
Oeu038646.1 Olea europaea HOM05D003570 ORTHO05D004207 1.7e-64 250.4 236 56.8
SGA_v2.0_scaffold22G09799 Striga asiatica HOM05D003570 ORTHO05D004207 2.8e-64 249.6 239 55.2
Lj4g0018208 Lotus japonicus HOM05D003570 ORTHO05D004207 3.7e-64 249.2 239 56.1
Cc11_g16040 Coffea canephora HOM05D003570 ORTHO05D004207 4.9e-64 248.8 245 53.1
CsaV3_5G030790 Cucumis sativus L. HOM05D003570 ORTHO05D004207 6.3e-64 248.4 257 51.8
PSO339G2835 Papaver somniferum HOM05D003570 ORTHO05D004207 8.3e-64 248.1 243 53.9
QL03p056574 Quercus lobata HOM05D003570 ORTHO05D004207 8.3e-64 248.1 251 53.8
THA.LOC104805269 Tarenaya hassleriana HOM05D003570 ORTHO05D004207 8.3e-64 248.1 240 50.4
Glyma.11G244100 Glycine max HOM05D003570 ORTHO05D004207 1.4e-63 247.3 238 54.6
EL10As2g23162 Beta vulgaris HOM05D003570 ORTHO05D004207 3.1e-63 246.1 257 52.1
Lj6g0027950 Lotus japonicus HOM05D003570 ORTHO05D004207 5.4e-63 245.4 239 54.8
Psat5g092360 Pisum sativum HOM05D003570 ORTHO05D004207 5.4e-63 245.4 240 50.8
MELO3C011924.2 Cucumis melo HOM05D003570 ORTHO05D004207 7.0e-63 245.0 255 50.2
TPR.G35967 Trifolium pratense HOM05D003570 ORTHO05D004207 7.0e-63 245.0 236 52.1
QL03p056953 Quercus lobata HOM05D003570 ORTHO05D004207 9.2e-63 244.6 233 55.4
CANSAT11G1164 Cannabis sativa HOM05D003570 ORTHO05D004207 1.6e-62 243.8 251 53.0
MD13G1104500 Malus domestica HOM05D003570 ORTHO05D004207 3.5e-62 242.7 262 51.9
RcHm_v2.0_Chr4g0432651 Rosa chinensis HOM05D003570 ORTHO05D004207 3.5e-62 242.7 236 54.7
HanXRQChr08g0208421 Helianthus annuus HOM05D003570 ORTHO05D004207 7.8e-62 241.5 253 49.0
PSO063G1535 Papaver somniferum HOM05D003570 ORTHO05D004207 7.8e-62 241.5 243 53.1
Lsat_1_v5_gn_0_32260 Lactuca sativa HOM05D003570 ORTHO05D004207 1.0e-61 241.1 243 50.2
MBI04_g13681_MAGBIO Magnolia biondii HOM05D003570 ORTHO05D004207 1.0e-61 241.1 235 53.2
FAN07G1326 Fragaria x ananassa HOM05D003570 ORTHO05D004207 3.8e-61 239.2 236 53.8
Medtr3g086460 Medicago truncatula HOM05D003570 ORTHO05D004207 6.6e-61 238.4 242 52.1
FAN12G2286 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.5e-60 237.3 236 53.4
COL.COLO4_27904 Corchorus olitorius HOM05D003570 ORTHO05D004207 1.9e-60 236.9 225 55.1
FAN22G0389 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.9e-60 236.9 236 53.4
FvH4_4g25360 Fragaria vesca HOM05D003570 ORTHO05D004207 4.3e-60 235.7 236 53.4
FAN17G0862 Fragaria x ananassa HOM05D003570 ORTHO05D004207 5.6e-60 235.3 236 53.0
ECA233G5166 Erigeron canadensis HOM05D002671 ORTHO05D002985 2.8e-59 233.0 245 48.2
Aqoxy7G03799 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 1.0e-58 231.1 250 51.6
Aqoxy5G03688 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 4.4e-57 225.7 242 52.1
ATR0824G009 Amborella trichopoda HOM05D003570 ORTHO05D004207 3.7e-56 222.6 231 48.9
PSO063G3251 Papaver somniferum HOM05D003570 ORTHO05D004207 3.2e-55 219.5 250 49.6
Aqoxy1G03220 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 8.0e-51 204.9 252 47.2
SEGI_05718 Sequoiadendron giganteum HOM05D003570 ORTHO05D004207 8.0e-51 204.9 231 46.3
CSS0045431 Camellia sinensis var. sinensis HOM05D003570 ORTHO05D004207 1.8e-50 203.8 170 65.9
Haze_11814 Corylus avellana HOM05D001314 ORTHO05D001165 7.5e-49 198.4 229 50.2
Zm00001eb212370 Zea mays HOM05D003570 ORTHO05D004207 4.9e-48 195.7 243 45.7
SHI04269 Sapria himalayana HOM05D003570 ORTHO05D004207 1.1e-47 194.5 252 41.7
CDE06G1553 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 1.2e-46 191.0 180 52.2
Zm00001eb062020 Zea mays HOM05D003570 ORTHO05D004207 1.2e-46 191.0 238 45.4
Atru.chr11.2174 Acer truncatum HOM05D003570 ORTHO05D004207 2.7e-46 189.9 254 43.7
Os02g0596100 Oryza sativa ssp. japonica HOM05D003570 ORTHO05D004207 2.7e-46 189.9 242 44.6
CBR_g38118 Chara braunii HOM05D003570 ORTHO05D004207 3.5e-46 189.5 236 43.2
Aa31LG1G1680 Aethionema arabicum HOM05D003570 ORTHO05D004207 1.0e-45 188.0 264 42.4
Pp3c9_21420 Physcomitrium patens HOM05D003570 ORTHO05D004207 1.0e-45 188.0 235 42.1
BcaC07g41664 Brassica carinata HOM05D003570 ORTHO05D004207 1.2e-43 181.0 259 40.9
A09p63350 Brassica napus HOM05D003570 ORTHO05D004207 2.1e-43 180.3 259 40.9
C08p46780 Brassica napus HOM05D003570 ORTHO05D004207 2.1e-43 180.3 259 40.9
BraA09t41684Z Brassica rapa HOM05D003570 ORTHO05D004207 2.1e-43 180.3 259 40.9
Sp1g11650 Schrenkiella parvula HOM05D003570 ORTHO05D004207 2.8e-43 179.9 252 41.3
Thhalv10007079m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 3.6e-43 179.5 240 43.8
Carub.0001s1286 Capsella rubella HOM05D003570 ORTHO05D004207 6.2e-43 178.7 240 41.7
Haze_20779 Corylus avellana HOM05D003570 ORTHO05D004207 1.4e-42 177.6 231 45.9
AL1G24790 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 1.8e-42 177.2 232 41.8
Mapoly0004s0250 Marchantia polymorpha HOM05D003570 ORTHO05D004207 1.8e-42 177.2 218 40.8
BolC8t52217H Brassica oleracea HOM05D003570 ORTHO05D004207 4.0e-42 176.0 261 40.2
unitig_22.g6426 Utricularia gibba HOM05D003570 ORTHO05D004207 4.0e-42 176.0 167 52.1
AT1G13120 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 1.5e-41 174.1 232 40.5
CARHR013490 Cardamine hirsuta HOM05D003570 ORTHO05D004207 1.5e-41 174.1 250 41.2
Sopen04g013730 Solanum pennellii HOM05D003570 ORTHO05D004207 6.2e-35 152.1 121 59.5
Thhalv10001133m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 1.2e-33 147.9 235 39.1
SMO367G0645 Selaginella moellendorffii HOM05D003570 ORTHO05D004207 1.5e-33 147.5 228 38.2
EL10Ac8g19584 Beta vulgaris HOM05D003570 ORTHO05D004207 1.4e-31 141.0 114 61.4
AagrBONN_evm.TU.Sc2ySwM_362.2178 Anthoceros agrestis HOM05D003570 ORTHO05D004207 2.1e-30 137.1 170 40.0
AL6G47680 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 6.9e-26 122.1 264 33.3
Hma1.2p1_0054F.1_g030990 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 9.9e-25 118.2 92 59.8
Medtr7g034350 Medicago truncatula HOM05D003570 ORTHO05D004207 1.3e-24 117.9 205 37.1
Cre06.g300900 Chlamydomonas reinhardtii HOM05D003570 ORTHO05D004207 3.8e-24 116.3 231 32.5
MCO05G059 Micromonas commoda HOM05D003570 ORTHO05D004207 4.9e-24 115.9 230 30.4
FAN08G3485 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.4e-23 114.4 119 50.4
TAR374G0522 Trochodendron aralioides HOM05D003570 ORTHO05D004207 5.4e-23 112.5 99 59.6
CiPaw.02G032100 Carya illinoinensis HOM05D003570 ORTHO05D004207 3.5e-22 109.8 240 34.2
AL2G22720 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 4.6e-22 109.4 141 47.5
Actinidia15111 Actinidia chinensis HOM05D003570 ORTHO05D004207 2.8e-19 100.1 86 62.8
BolC5t29767H Brassica oleracea HOM05D003570 ORTHO05D004207 3.4e-17 93.2 191 31.9
PRCOL_00001147 Prasinoderma coloniale HOM05D003570 ORTHO05D004207 4.5e-17 92.8 197 34.5
Actinidia15112 Actinidia chinensis HOM05D003570 ORTHO05D004207 1.7e-16 90.9 81 61.7
Glyma.18G013000 Glycine max HOM05D003570 ORTHO05D004207 1.4e-15 87.8 79 55.7
BcaC05g25084 Brassica carinata HOM05D003570 ORTHO05D004207 2.4e-15 87.0 183 32.8
FAN08G0154 Fragaria x ananassa HOM05D003570 ORTHO05D004207 7.9e-14 82.0 94 44.7
FvH4_5g15750 Fragaria vesca HOM05D003570 ORTHO05D004207 1.3e-13 81.3 61 67.2
MD05G1151500 Malus domestica HOM05D003570 ORTHO05D004207 1.9e-12 77.4 49 79.6
Sp2g10400 Schrenkiella parvula HOM05D003570 ORTHO05D004207 2.5e-12 77.0 110 40.9
C05p10220 Brassica napus HOM05D003570 ORTHO05D004207 2.8e-11 73.6 116 31.9
EL10Ac1g01653 Beta vulgaris HOM05D003570 ORTHO05D004207 6.9e-10 68.9 49 67.3
FAN13G1935 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.6e-09 67.0 62 53.2
AagrBONN_evm.TU.Sc2ySwM_344.4464 Anthoceros agrestis HOM05D003570 ORTHO05D004207 3.5e-06 56.6 77 36.4


User provided reference genes

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