Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16164 Vaccinium macrocarpon HOM05D007154 ORTHO05D008945 3.6e-79 298.1 145 100.0
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 6.9e-46 187.6 139 69.8
Sabra10G0198000 Salix brachista HOM05D007154 ORTHO05D008945 5.8e-45 184.5 136 66.9
Dinv01916 Davidia involucrata HOM05D007154 ORTHO05D008945 3.8e-44 181.8 136 66.9
DCAR_030346 Daucus carota HOM05D007154 ORTHO05D008945 3.2e-43 178.7 133 66.2
Potri.010G254600 Populus trichocarpa HOM05D007154 ORTHO05D008945 3.2e-43 178.7 136 64.7
Actinidia04367 Actinidia chinensis HOM05D007154 ORTHO05D008945 5.4e-43 177.9 136 66.2
Cfa018670 Carpinus fangiana HOM05D007154 ORTHO05D008945 9.3e-43 177.2 136 64.7
EL10Ac2g04490 Beta vulgaris HOM05D007154 ORTHO05D008945 4.3e-40 168.3 136 64.7
Thecc.02G152200 Theobroma cacao HOM05D007154 ORTHO05D008945 4.3e-40 168.3 137 62.8
Lalb_Chr01g0013651 Lupinus albus HOM05D007154 ORTHO05D008945 5.6e-40 167.9 136 63.2
Manes.04G160900 Manihot esculenta HOM05D007154 ORTHO05D008945 7.3e-40 167.5 136 64.0
CSS0036440 Camellia sinensis var. sinensis HOM05D007154 ORTHO05D008945 1.3e-39 166.8 138 61.6
GSVIVG01034352001 Vitis vinifera HOM05D007154 ORTHO05D008945 1.3e-39 166.8 134 62.7
MELO3C005082.2 Cucumis melo HOM05D007154 ORTHO05D008945 1.6e-39 166.4 140 61.4
Oeu019256.1 Olea europaea HOM05D007154 ORTHO05D008945 2.8e-39 165.6 133 60.2
Ca_23384_v3 Cicer arietinum L. HOM05D007154 ORTHO05D008945 4.8e-39 164.9 136 63.2
Ciclev10016869m.g Citrus clementina HOM05D007154 ORTHO05D008945 4.8e-39 164.9 137 62.0
Eucgr.G02613 Eucalyptus grandis HOM05D007154 ORTHO05D008945 6.2e-39 164.5 138 61.6
arahy.Tifrunner.gnm1.ann1.408I3G Arachis hypogaea HOM05D007154 ORTHO05D008945 8.1e-39 164.1 136 60.3
Peaxi162Scf00329g00212 Petunia axillaris HOM05D007154 ORTHO05D008945 1.1e-38 163.7 141 58.9
Atru.chr11.40 Acer truncatum HOM05D007154 ORTHO05D008945 1.4e-38 163.3 133 62.4
Sed0008143 Sechium edule HOM05D007154 ORTHO05D008945 1.8e-38 162.9 141 58.9
COL.COLO4_33150 Corchorus olitorius HOM05D007154 ORTHO05D008945 2.4e-38 162.5 134 61.2
Lsat_1_v5_gn_9_117140 Lactuca sativa HOM05D007154 ORTHO05D008945 2.4e-38 162.5 136 59.6
Nitab4.5_0007445g0030 Nicotiana tabacum HOM05D007154 ORTHO05D008945 2.4e-38 162.5 109 69.7
AUR62023198 Chenopodium quinoa HOM05D007154 ORTHO05D008945 3.1e-38 162.2 136 61.0
Nitab4.5_0011708g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 3.1e-38 162.2 109 69.7
SalBow4G2238 Salvia bowleyana HOM05D007154 ORTHO05D008945 3.1e-38 162.2 135 60.7
Medtr8g020800 Medicago truncatula HOM05D007154 ORTHO05D008945 4.0e-38 161.8 138 61.6
CAN.G419.16 Capsicum annuum HOM05D007154 ORTHO05D008945 5.3e-38 161.4 142 57.7
Prupe.1G351600 Prunus persica HOM05D007154 ORTHO05D008945 5.3e-38 161.4 136 58.8
TWI53G1167 Tripterygium wilfordii HOM05D007154 ORTHO05D008945 5.3e-38 161.4 136 57.4
THA.LOC104800635 Tarenaya hassleriana HOM05D007154 ORTHO05D008945 6.9e-38 161.0 146 59.6
arahy.Tifrunner.gnm1.ann1.JHQS48 Arachis hypogaea HOM05D007154 ORTHO05D008945 9.0e-38 160.6 136 59.6
CANSAT78G1733 Cannabis sativa HOM05D007154 ORTHO05D008945 9.0e-38 160.6 138 60.1
PGSC0003DMG400025308 Solanum tuberosum HOM05D007154 ORTHO05D008945 9.0e-38 160.6 140 58.6
Nitab4.5_0002707g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 1.5e-37 159.8 109 67.9
ClCG01G007940 Citrullus lanatus HOM05D007154 ORTHO05D008945 2.0e-37 159.5 144 57.6
Cc00_g03880 Coffea canephora HOM05D007154 ORTHO05D008945 2.0e-37 159.5 141 58.2
QL01p000323 Quercus lobata HOM05D007154 ORTHO05D008945 2.0e-37 159.5 127 62.2
RcHm_v2.0_Chr4g0447181 Rosa chinensis HOM05D007154 ORTHO05D008945 4.5e-37 158.3 136 58.8
Lj3g0022846 Lotus japonicus HOM05D007154 ORTHO05D008945 5.8e-37 157.9 136 59.6
PGR142G2984 Punica granatum HOM05D007154 ORTHO05D008945 5.8e-37 157.9 101 73.3
Solyc04g008770.3 Solanum lycopersicum HOM05D007154 ORTHO05D008945 5.8e-37 157.9 140 57.1
Sopen04g003950 Solanum pennellii HOM05D007154 ORTHO05D008945 5.8e-37 157.9 140 57.1
Ah.10g037940 Amaranthus hybridus HOM05D007154 ORTHO05D008945 9.9e-37 157.1 134 58.2
TAR371G0017 Trochodendron aralioides HOM05D007154 ORTHO05D008945 9.9e-37 157.1 133 58.6
Thhalv10005037m.g Eutrema salsugineum HOM05D007154 ORTHO05D008945 1.3e-36 156.8 131 57.3
Glyma.07G039300 Glycine max HOM05D007154 ORTHO05D008945 1.3e-36 156.8 105 70.5
Lj3C844G3 Lonicera japonica HOM05D007154 ORTHO05D008945 1.3e-36 156.8 133 58.6
FAN17G3039 Fragaria x ananassa HOM05D007154 ORTHO05D008945 3.8e-36 155.2 136 58.1
Gohir.A04G109800 Gossypium hirsutum HOM05D007154 ORTHO05D008945 4.9e-36 154.8 134 56.7
Gorai.012G136600 Gossypium raimondii HOM05D007154 ORTHO05D008945 6.4e-36 154.5 134 58.2
HanXRQChr13g0420721 Helianthus annuus HOM05D007154 ORTHO05D008945 6.4e-36 154.5 136 55.9
MD13G1001100 Malus domestica HOM05D007154 ORTHO05D008945 8.4e-36 154.1 136 58.1
AUR62023245 Chenopodium quinoa HOM05D007154 ORTHO05D008945 1.1e-35 153.7 109 67.0
FAN07G0022 Fragaria x ananassa HOM05D007154 ORTHO05D008945 1.1e-35 153.7 136 57.4
Gohir.D04G150000 Gossypium hirsutum HOM05D007154 ORTHO05D008945 1.1e-35 153.7 134 58.2
HPP92_003488 Vanilla planifolia HOM05D007154 ORTHO05D008945 1.4e-35 153.3 101 64.4
AL6G34660 Arabidopsis lyrata HOM05D007154 ORTHO05D008945 1.9e-35 152.9 130 58.5
CsaV3_5G021910 Cucumis sativus L. HOM05D007154 ORTHO05D008945 1.9e-35 152.9 144 55.6
Psat4g220160 Pisum sativum HOM05D007154 ORTHO05D008945 1.9e-35 152.9 133 59.4
Aqoxy3G04335 Aquilegia oxysepala HOM05D007154 ORTHO05D008945 2.4e-35 152.5 124 59.7
Sp2g23770 Schrenkiella parvula HOM05D007154 ORTHO05D008945 2.4e-35 152.5 132 56.1
Aa31LG11G2830 Aethionema arabicum HOM05D007154 ORTHO05D008945 4.2e-35 151.8 134 57.5
FvH4_4g37330 Fragaria vesca HOM05D007154 ORTHO05D008945 5.4e-35 151.4 112 66.1
AT5G23395 Arabidopsis thaliana HOM05D007154 ORTHO05D008945 2.7e-34 149.1 130 56.9
VMungo0331G0746 Vigna mungo HOM05D007154 ORTHO05D008945 2.7e-34 149.1 136 55.1
PSO063G0981 Papaver somniferum HOM05D007154 ORTHO05D008945 4.6e-34 148.3 138 55.8
PSO782G0712 Papaver somniferum HOM05D007154 ORTHO05D008945 4.6e-34 148.3 138 55.8
Sc10g0006590 Simmondsia chinensis HOM05D007154 ORTHO05D008945 4.6e-34 148.3 136 53.7
Migut.B01210 Erythranthe guttata HOM05D007154 ORTHO05D008945 7.9e-34 147.5 134 57.5
Nn3g18537 Nelumbo nucifera HOM05D007154 ORTHO05D008945 1.0e-33 147.1 136 56.6
TPR.G36620 Trifolium pratense HOM05D007154 ORTHO05D008945 1.0e-33 147.1 131 55.7
CiPaw.16G000700 Carya illinoinensis HOM05D007154 ORTHO05D008945 1.8e-33 146.4 136 56.6
Phvul.010G129500 Phaseolus vulgaris HOM05D007154 ORTHO05D008945 5.1e-33 144.8 136 55.9
Carub.0006s2118 Capsella rubella HOM05D007154 ORTHO05D008945 6.7e-33 144.4 131 55.0
SGA_v2.0_scaffold166G38315 Striga asiatica HOM05D007154 ORTHO05D008945 1.1e-32 143.7 115 59.1
C07p44160 Brassica napus HOM05D007154 ORTHO05D008945 2.5e-32 142.5 133 53.4
BolC7t44940H Brassica oleracea HOM05D007154 ORTHO05D008945 2.5e-32 142.5 133 53.4
CDE04G0025 Ceratophyllum demersum HOM05D007154 ORTHO05D008945 2.5e-32 142.5 129 55.8
ECA240G2562 Erigeron canadensis HOM05D007154 ORTHO05D008945 2.5e-32 142.5 141 53.9
SGA_v2.0_scaffold249G44952 Striga asiatica HOM05D007154 ORTHO05D008945 3.3e-32 142.1 112 60.7
Cpa.g.sc221.16 Carica papaya HOM05D007154 ORTHO05D008945 9.6e-32 140.6 104 66.3
Hund16199 Selenicereus undatus HOM05D007154 ORTHO05D008945 9.6e-32 140.6 136 56.6
Haze_17398 Corylus avellana HOM05D007154 ORTHO05D008945 3.7e-31 138.7 136 54.4
A06p34370 Brassica napus HOM05D007154 ORTHO05D008945 6.2e-31 137.9 133 51.9
BraA06t26367Z Brassica rapa HOM05D007154 ORTHO05D008945 6.2e-31 137.9 133 51.9
CARHR190110 Cardamine hirsuta HOM05D007154 ORTHO05D008945 6.2e-31 137.9 98 64.3
ATR0124G040 Amborella trichopoda HOM05D007154 ORTHO05D008945 1.4e-30 136.7 133 51.1
HPP92_026886 Vanilla planifolia HOM05D007154 ORTHO05D008945 1.8e-30 136.3 80 72.5
Glyma.16G008100 Glycine max HOM05D007154 ORTHO05D008945 5.3e-30 134.8 87 71.3
Os04g0527700 Oryza sativa ssp. japonica HOM05D007154 ORTHO05D008945 5.8e-29 131.3 97 60.8
BcaNung03727 Brassica carinata HOM05D007154 ORTHO05D008945 7.6e-29 131.0 113 57.5
Zm00001eb427080 Zea mays HOM05D007154 ORTHO05D008945 1.9e-27 126.3 96 59.4
Zm00001eb076710 Zea mays HOM05D007154 ORTHO05D008945 2.4e-27 125.9 97 58.8
SHI21164 Sapria himalayana HOM05D007154 ORTHO05D008945 3.2e-27 125.6 118 55.9
unitig_61.g26453 Utricularia gibba HOM05D007154 ORTHO05D008945 2.3e-25 119.4 76 71.1
TAR371G0737 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.1e-24 117.1 106 54.7
Duzib248G1404 Durio zibethinus HOM05D007154 ORTHO05D008945 3.7e-23 112.1 91 62.6
Oeu037446.1 Olea europaea HOM05D007154 ORTHO05D008945 4.0e-22 108.6 74 64.9
TAR627G0850 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.9e-19 99.8 85 56.5
Pp3c11_17450 Physcomitrium patens HOM05D007154 ORTHO05D008945 1.2e-18 97.1 86 47.7
TAR622G0969 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.9e-16 89.7 107 45.8
AagrBONN_evm.TU.Sc2ySwM_362.2201 Anthoceros agrestis HOM05D007154 ORTHO05D008945 1.3e-12 77.0 81 45.7
Duzib051G0001 Durio zibethinus HOM05D007154 ORTHO05D008945 1.7e-12 76.6 70 57.1
Cfa026739 Carpinus fangiana HOM05D007154 ORTHO05D008945 1.6e-10 70.1 72 40.3
Mapoly0093s0036 Marchantia polymorpha HOM05D007154 ORTHO05D008945 1.0e-09 67.4 69 40.6
MCO07G261 Micromonas commoda HOM05D007154 ORTHO05D008945 5.7e-08 61.6 84 36.9
SEGI_35140 Sequoiadendron giganteum HOM05D007154 ORTHO05D008945 5.7e-08 61.6 43 58.1


User provided reference genes

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