Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16152 Vaccinium macrocarpon HOM05D002970 ORTHO05D009571 3.7e-216 754.6 381 100.0
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 2.2e-96 356.7 329 61.7
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 1.5e-84 317.4 339 55.2
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 5.5e-79 298.9 344 51.2
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 4.0e-77 292.7 344 49.4
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 6.8e-77 292.0 304 56.6
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 3.4e-76 289.7 327 52.6
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 4.4e-76 289.3 303 55.8
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 9.8e-76 288.1 315 52.7
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 2.8e-75 286.6 314 53.8
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 1.4e-74 284.3 304 53.3
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 4.1e-74 282.7 304 53.6
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 2.0e-73 280.4 303 53.5
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 1.3e-72 277.7 318 50.9
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 2.3e-72 276.9 308 51.6
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 2.3e-72 276.9 322 51.6
Sabra08G0138400 Salix brachista HOM05D000799 ORTHO05D000629 2.3e-72 276.9 308 52.6
Atru.BG.282.p Acer truncatum HOM05D002970 ORTHO05D009571 6.6e-72 275.4 244 60.2
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 8.6e-72 275.0 322 51.6
Sopen05g009220 Solanum pennellii HOM05D002970 ORTHO05D009571 1.1e-71 274.6 306 52.6
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 1.5e-71 274.2 306 52.0
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 1.5e-71 274.2 328 49.7
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 1.9e-71 273.9 307 53.1
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 2.5e-71 273.5 324 50.9
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 3.3e-71 273.1 316 51.6
Nitab4.5_0002688g0010 Nicotiana tabacum HOM05D002970 ORTHO05D009571 3.3e-71 273.1 307 52.8
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 9.5e-71 271.6 300 53.0
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 1.2e-70 271.2 302 53.0
Peaxi162Scf00128g00724 Petunia axillaris HOM05D002970 ORTHO05D009571 2.1e-70 270.4 305 50.8
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 2.1e-70 270.4 303 52.8
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 1.8e-69 267.3 301 54.5
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 1.8e-69 267.3 322 47.5
HanXRQChr17g0569221 Helianthus annuus HOM05D002970 ORTHO05D009571 1.8e-69 267.3 295 54.2
Lalb_Chr07g0185611 Lupinus albus HOM05D002970 ORTHO05D009571 2.3e-69 266.9 293 52.2
ECA234G3025 Erigeron canadensis HOM05D002970 ORTHO05D009571 4.0e-69 266.2 314 51.3
PGR102G3027 Punica granatum HOM05D002970 ORTHO05D009571 5.8e-68 262.3 315 51.4
Aqoxy5G03608 Aquilegia oxysepala HOM05D002970 ORTHO05D009571 2.2e-67 260.4 308 49.0
Lsat_1_v5_gn_4_2440 Lactuca sativa HOM05D000799 ORTHO05D009571 1.9e-66 257.3 297 51.9
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 4.1e-66 256.1 305 49.5
Ca_17805_v3 Cicer arietinum L. HOM05D002970 ORTHO05D009571 9.2e-66 255.0 296 50.7
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 1.2e-65 254.6 284 53.9
EL10Ac6g15186 Beta vulgaris HOM05D002970 ORTHO05D009571 1.6e-65 254.2 307 50.8
PSO782G2321 Papaver somniferum HOM05D002970 ORTHO05D009571 2.0e-65 253.8 238 58.0
Eucgr.B03232 Eucalyptus grandis HOM05D002970 ORTHO05D009571 2.7e-65 253.4 335 45.4
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 4.6e-65 252.7 279 52.7
PSO063G2167 Papaver somniferum HOM05D002970 ORTHO05D009571 7.8e-65 251.9 281 50.9
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 1.0e-64 251.5 298 50.0
Gohir.A05G311600 Gossypium hirsutum HOM05D002970 ORTHO05D009571 3.0e-64 250.0 292 48.6
Hund25423 Selenicereus undatus HOM05D002970 ORTHO05D009571 8.6e-64 248.4 305 48.9
TPR.G6253 Trifolium pratense HOM05D002970 ORTHO05D009571 1.5e-63 247.7 279 51.6
THA.LOC104825684 Tarenaya hassleriana HOM05D002970 ORTHO05D009571 1.9e-63 247.3 307 47.2
AUR62005542 Chenopodium quinoa HOM05D002970 ORTHO05D009571 3.3e-63 246.5 310 48.4
Thhalv10004665m.g Eutrema salsugineum HOM05D002970 ORTHO05D009571 4.3e-63 246.1 303 48.5
ATR0824G068 Amborella trichopoda HOM05D002970 ORTHO05D009571 5.6e-63 245.7 304 47.7
Medtr8g089550 Medicago truncatula HOM05D002970 ORTHO05D009571 9.5e-63 245.0 287 50.2
AT3G26085 Arabidopsis thaliana HOM05D002970 ORTHO05D009571 6.2e-62 242.3 301 47.2
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 8.0e-62 241.9 305 49.5
SalBow2G2585 Salvia bowleyana HOM05D002970 ORTHO05D009571 1.1e-61 241.5 267 53.6
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 2.3e-61 240.4 313 46.6
BcaC06g33929 Brassica carinata HOM05D002970 ORTHO05D009571 2.3e-61 240.4 313 46.6
Sp2g15280 Schrenkiella parvula HOM05D002970 ORTHO05D009571 2.3e-61 240.4 303 47.5
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 3.1e-61 240.0 315 46.3
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 4.0e-61 239.6 315 46.3
BcaC06g31093 Brassica carinata HOM05D002970 ORTHO05D009571 6.8e-61 238.8 303 48.2
AL5G14780 Arabidopsis lyrata HOM05D002970 ORTHO05D009571 8.9e-61 238.4 308 46.4
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 1.2e-60 238.0 324 45.4
Carub.0005s0396 Capsella rubella HOM05D002970 ORTHO05D009571 5.8e-60 235.7 301 44.2
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 7.5e-60 235.3 291 47.4
CARHR147070 Cardamine hirsuta HOM05D002970 ORTHO05D009571 9.8e-60 235.0 303 44.2
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 9.8e-60 235.0 390 39.7
Psat7g060120 Pisum sativum HOM05D002970 ORTHO05D009571 2.2e-59 233.8 147 75.5
arahy.Tifrunner.gnm1.ann1.C1FJC6 Arachis hypogaea HOM05D002970 ORTHO05D009571 8.3e-59 231.9 246 53.7
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 8.3e-59 231.9 316 45.3
arahy.Tifrunner.gnm1.ann1.4Z4H5J Arachis hypogaea HOM05D002970 ORTHO05D009571 4.1e-58 229.6 273 49.8
CDE02G1212 Ceratophyllum demersum HOM05D002970 ORTHO05D009571 2.7e-57 226.9 309 44.3
Zm00001eb406400 Zea mays HOM05D002970 ORTHO05D009571 3.5e-57 226.5 254 47.2
HPP92_024537 Vanilla planifolia HOM05D002970 ORTHO05D009571 6.0e-57 225.7 307 43.0
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 1.7e-56 224.2 291 47.8
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 2.8e-54 216.9 322 42.2
unitig_749.g13282 Utricularia gibba HOM05D002970 ORTHO05D009571 8.1e-54 215.3 144 71.5
Aa31LG2G6280 Aethionema arabicum HOM05D002970 ORTHO05D009571 1.4e-53 214.5 305 44.6
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 2.2e-51 207.2 304 44.4
Migut.K00672 Erythranthe guttata HOM05D002970 ORTHO05D009571 4.1e-50 203.0 306 45.1
Solyc05g014190.4 Solanum lycopersicum HOM05D002970 ORTHO05D009571 1.0e-48 198.4 259 47.5
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 6.2e-46 189.1 261 44.4
TWI36G0308 Tripterygium wilfordii HOM05D002970 ORTHO05D009571 8.1e-46 188.7 263 45.6
CSS0042994 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 4.6e-41 172.9 98 84.7
Pp3c24_16920 Physcomitrium patens HOM05D002970 ORTHO05D009571 1.5e-36 157.9 292 35.6
Mapoly0082s0035 Marchantia polymorpha HOM05D002970 ORTHO05D009571 2.2e-35 154.1 141 49.6
AagrBONN_evm.TU.Sc2ySwM_344.962 Anthoceros agrestis HOM05D002970 ORTHO05D009571 2.1e-33 147.5 305 35.1
SMO365G0071 Selaginella moellendorffii HOM05D002970 ORTHO05D009571 2.1e-30 137.5 140 49.3
Dinv14770 Davidia involucrata HOM05D002970 ORTHO05D009571 5.8e-28 129.4 247 40.5
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 5.4e-26 122.9 220 38.6
Cre12.g556150 Chlamydomonas reinhardtii HOM05D002970 ORTHO05D009571 8.1e-22 109.0 130 39.2
PRCOL_00001586 Prasinoderma coloniale HOM05D002970 ORTHO05D009571 7.6e-20 102.4 129 41.9
Sed0000980 Sechium edule HOM05D002970 ORTHO05D009571 3.8e-19 100.1 171 40.4
MSTRG.542 Avicennia marina HOM05D002970 ORTHO05D009571 8.4e-19 99.0 234 34.6
MBI11_g22623_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 8.4e-19 99.0 90 55.6
CBR_g20339 Chara braunii HOM05D002970 ORTHO05D009571 4.2e-18 96.7 195 32.3
Glyma.05G172100 Glycine max HOM05D002970 ORTHO05D009571 4.2e-18 96.7 184 38.0
arahy.Tifrunner.gnm1.ann1.WDY3XU Arachis hypogaea HOM05D002970 ORTHO05D009571 5.5e-18 96.3 156 41.0
Glyma.06G231900 Glycine max HOM05D002970 ORTHO05D009571 3.5e-17 93.6 62 69.4
MCO09G664 Micromonas commoda HOM05D002970 ORTHO05D009571 1.5e-15 88.2 117 37.6
SEGI_41532 Sequoiadendron giganteum HOM05D031330 ORTHO05D009571 4.2e-10 70.1 220 29.5
CiPaw.09G014900 Carya illinoinensis HOM05D002970 ORTHO05D009571 3.7e-06 57.0 90 45.6
CiPaw.11G163100 Carya illinoinensis HOM05D002970 ORTHO05D009571 3.7e-06 57.0 90 45.6


User provided reference genes

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