Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16148 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 2.9e-91 338.6 172 100.0
Rhsim12G0107100 Rhododendron simsii HOM05D001304 ORTHO05D008890 2.6e-68 262.3 141 95.0
CSS0032412 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D008721 1.9e-63 246.1 140 86.4
Actinidia15135 Actinidia chinensis HOM05D001304 ORTHO05D008890 6.2e-62 241.1 139 86.3
CiPaw.05G174500 Carya illinoinensis HOM05D001304 ORTHO05D008890 2.6e-60 235.7 139 82.7
Haze_12318 Corylus avellana HOM05D001304 ORTHO05D008890 9.9e-60 233.8 139 82.0
Manes.12G017100 Manihot esculenta HOM05D001304 ORTHO05D008890 1.7e-59 233.0 139 84.2
Ciclev10032669m.g Citrus clementina HOM05D001304 ORTHO05D008890 2.2e-59 232.6 139 84.2
Potri.010G053600 Populus trichocarpa HOM05D001304 ORTHO05D008890 6.4e-59 231.1 160 75.6
COL.COLO4_23565 Corchorus olitorius HOM05D001304 ORTHO05D008890 1.4e-58 229.9 139 83.5
Dinv11009 Davidia involucrata HOM05D001304 ORTHO05D008890 1.4e-58 229.9 139 83.5
Eucgr.H04690 Eucalyptus grandis HOM05D001304 ORTHO05D008890 3.2e-58 228.8 141 82.3
TWI36G0586 Tripterygium wilfordii HOM05D001304 ORTHO05D008890 4.2e-58 228.4 139 81.3
Cfa009288 Carpinus fangiana HOM05D001304 ORTHO05D008890 5.4e-58 228.0 140 80.7
Glyma.11G246700 Glycine max HOM05D001304 ORTHO05D008890 5.4e-58 228.0 139 81.3
arahy.Tifrunner.gnm1.ann1.VHC2JK Arachis hypogaea HOM05D001304 ORTHO05D008890 7.1e-58 227.6 138 81.9
Prupe.1G237600 Prunus persica HOM05D001304 ORTHO05D008890 7.1e-58 227.6 139 81.3
PGR119G0865 Punica granatum HOM05D001304 ORTHO05D008890 1.2e-57 226.9 139 83.5
Aa31LG4G12100 Aethionema arabicum HOM05D001304 ORTHO05D008890 1.6e-57 226.5 140 78.6
Carub.0002s1413 Capsella rubella HOM05D001304 ORTHO05D008890 1.6e-57 226.5 139 79.9
Phvul.001G258300 Phaseolus vulgaris HOM05D001304 ORTHO05D008890 2.1e-57 226.1 139 80.6
Duzib251G0230 Durio zibethinus HOM05D001304 ORTHO05D008890 2.7e-57 225.7 139 82.7
AL2G26400 Arabidopsis lyrata HOM05D001304 ORTHO05D008890 3.5e-57 225.3 139 79.1
BolC6t39193H Brassica oleracea HOM05D001304 ORTHO05D007800 3.5e-57 225.3 141 78.7
CARHR060290 Cardamine hirsuta HOM05D001304 ORTHO05D008890 3.5e-57 225.3 139 78.4
VMungo1383G0240 Vigna mungo HOM05D001304 ORTHO05D008890 3.5e-57 225.3 139 79.9
C06p42370 Brassica napus HOM05D001304 ORTHO05D007800 4.6e-57 224.9 140 79.3
BcaC08g46187 Brassica carinata HOM05D001304 ORTHO05D008890 6.0e-57 224.6 139 79.1
BcaB03g15175 Brassica carinata HOM05D001304 ORTHO05D008890 7.8e-57 224.2 139 79.1
Sp5g22690 Schrenkiella parvula HOM05D001304 ORTHO05D008890 1.3e-56 223.4 139 79.1
Sabra10G0017000 Salix brachista HOM05D001304 ORTHO05D008890 1.7e-56 223.0 129 85.3
THA.LOC104825532 Tarenaya hassleriana HOM05D001304 ORTHO05D008890 1.7e-56 223.0 139 79.9
RcHm_v2.0_Chr4g0431911 Rosa chinensis HOM05D001304 ORTHO05D008890 2.3e-56 222.6 142 78.9
Ca_16494_v3 Cicer arietinum L. HOM05D001304 ORTHO05D008890 3.9e-56 221.9 141 82.3
Thhalv10019020m.g Eutrema salsugineum HOM05D001304 ORTHO05D008890 3.9e-56 221.9 139 78.4
Thecc.02G270700 Theobroma cacao HOM05D001304 ORTHO05D008890 3.9e-56 221.9 139 79.9
Nitab4.5_0001318g0090 Nicotiana tabacum HOM05D001304 ORTHO05D008890 5.1e-56 221.5 159 73.0
PGSC0003DMG400017453 Solanum tuberosum HOM05D001304 ORTHO05D008890 5.1e-56 221.5 164 71.3
TAR622G1249 Trochodendron aralioides HOM05D001304 ORTHO05D008890 5.1e-56 221.5 139 79.1
TAR629G1650 Trochodendron aralioides HOM05D001304 ORTHO05D008890 5.1e-56 221.5 141 78.7
FvH4_4g24830 Fragaria vesca HOM05D001304 ORTHO05D008890 8.7e-56 220.7 142 78.9
AT1G67700 Arabidopsis thaliana HOM05D001304 ORTHO05D008890 1.1e-55 220.3 139 77.7
A07p32450 Brassica napus HOM05D001304 ORTHO05D008890 1.1e-55 220.3 139 79.1
BraA07t30869Z Brassica rapa HOM05D001304 ORTHO05D008890 1.1e-55 220.3 139 79.1
Nitab4.5_0000041g0390 Nicotiana tabacum HOM05D001304 ORTHO05D008890 1.1e-55 220.3 165 70.3
GSVIVG01010306001 Vitis vinifera HOM05D001304 ORTHO05D008890 1.1e-55 220.3 139 79.1
FAN07G1515 Fragaria x ananassa HOM05D001304 ORTHO05D008890 1.9e-55 219.5 140 79.3
FAN12G0763 Fragaria x ananassa HOM05D001304 ORTHO05D008890 1.9e-55 219.5 140 79.3
FAN17G2678 Fragaria x ananassa HOM05D001304 ORTHO05D008890 1.9e-55 219.5 140 79.3
FAN22G1346 Fragaria x ananassa HOM05D001304 ORTHO05D008890 1.9e-55 219.5 140 79.3
Lalb_Chr08g0230761 Lupinus albus HOM05D001304 ORTHO05D008890 1.9e-55 219.5 140 77.9
Sopen05g009420 Solanum pennellii HOM05D001304 ORTHO05D008890 2.5e-55 219.2 164 70.7
BcaC08g46045 Brassica carinata HOM05D001304 ORTHO05D008890 5.6e-55 218.0 139 78.4
C06p38480 Brassica napus HOM05D001304 ORTHO05D008890 5.6e-55 218.0 139 78.4
Solyc05g014310.3 Solanum lycopersicum HOM05D001304 ORTHO05D008890 5.6e-55 218.0 163 69.3
CsaV3_2G025190 Cucumis sativus L. HOM05D001304 ORTHO05D008890 7.3e-55 217.6 139 77.7
MSTRG.7966 Avicennia marina HOM05D001304 ORTHO05D008890 9.6e-55 217.2 131 82.4
Lj6C819T3 Lonicera japonica HOM05D001304 ORTHO05D008890 1.3e-54 216.9 140 80.7
Lj6g0017703 Lotus japonicus HOM05D001304 ORTHO05D008890 1.6e-54 216.5 137 80.3
MD13G1108600 Malus domestica HOM05D001304 ORTHO05D008890 1.6e-54 216.5 139 77.0
Cc11_g16390 Coffea canephora HOM05D001304 ORTHO05D008890 2.8e-54 215.7 142 76.1
SGA_v2.0_scaffold484G52361 Striga asiatica HOM05D001304 ORTHO05D008890 3.6e-54 215.3 139 79.9
ATR0824G252 Amborella trichopoda HOM05D001304 ORTHO05D008890 8.1e-54 214.2 138 78.3
Migut.K00680 Erythranthe guttata HOM05D001304 ORTHO05D008890 1.1e-53 213.8 157 71.3
Oeu020321.1 Olea europaea HOM05D001304 ORTHO05D008890 1.8e-53 213.0 138 77.5
Gohir.A04G137800 Gossypium hirsutum HOM05D001304 ORTHO05D008890 2.4e-53 212.6 138 77.5
Sc04g0009800 Simmondsia chinensis HOM05D001304 ORTHO05D008890 2.4e-53 212.6 140 74.3
Sed0004969 Sechium edule HOM05D001304 ORTHO05D008890 3.1e-53 212.2 139 77.0
Aqoxy5G03572 Aquilegia oxysepala HOM05D001304 ORTHO05D008890 4.0e-53 211.8 139 76.3
Gohir.D04G181000 Gossypium hirsutum HOM05D001304 ORTHO05D008890 5.3e-53 211.5 138 76.8
Gorai.012G174200 Gossypium raimondii HOM05D001304 ORTHO05D008890 5.3e-53 211.5 138 76.8
Peaxi162Scf00128g00729 Petunia axillaris HOM05D001304 ORTHO05D008890 5.3e-53 211.5 135 79.3
AUR62005553 Chenopodium quinoa HOM05D001304 ORTHO05D008890 9.0e-53 210.7 140 74.3
HanXRQChr08g0207321 Helianthus annuus HOM05D001304 ORTHO05D008890 1.2e-52 210.3 144 73.6
CANSAT01G0179 Cannabis sativa HOM05D001304 ORTHO05D008890 1.5e-52 209.9 142 74.6
AUR62024180 Chenopodium quinoa HOM05D001304 ORTHO05D008890 2.0e-52 209.5 140 74.3
unitig_8.g2912 Utricularia gibba HOM05D000468 ORTHO05D008890 2.0e-52 209.5 139 75.5
PSO063G7645 Papaver somniferum HOM05D001304 ORTHO05D008890 5.8e-52 208.0 139 73.4
PSO782G0777 Papaver somniferum HOM05D001304 ORTHO05D008890 5.8e-52 208.0 139 73.4
Ah.02g130500 Amaranthus hybridus HOM05D001304 ORTHO05D008890 9.9e-52 207.2 138 73.2
SalBow2G0118 Salvia bowleyana HOM05D001304 ORTHO05D008890 4.9e-51 204.9 135 76.3
Hund06057 Selenicereus undatus HOM05D001304 ORTHO05D008890 4.9e-51 204.9 141 72.3
ECA233G5962 Erigeron canadensis HOM05D000468 ORTHO05D000548 1.1e-50 203.8 143 71.3
CDE09G0600 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 9.3e-50 200.7 133 72.9
Medtr3g086040 Medicago truncatula HOM05D001304 ORTHO05D008890 9.3e-50 200.7 140 74.3
EL10As2g23248 Beta vulgaris HOM05D001304 ORTHO05D008890 1.2e-49 200.3 137 72.3
CDE02G1129 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 2.1e-49 199.5 133 72.2
HPP92_004594 Vanilla planifolia HOM05D001304 ORTHO05D008890 7.9e-49 197.6 142 71.1
TPR.G33410 Trifolium pratense HOM05D001304 ORTHO05D008890 1.1e-47 193.7 126 76.2
Atru.chr11.2216 Acer truncatum HOM05D001304 ORTHO05D008890 2.1e-46 189.5 109 85.3
BolC6t38945H Brassica oleracea HOM05D001304 ORTHO05D008890 2.8e-46 189.1 125 77.6
CDE04G1632 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 7.6e-44 181.0 135 63.0
Lsat_1_v5_gn_8_150960 Lactuca sativa HOM05D001304 ORTHO05D008890 7.6e-44 181.0 124 72.6
Zm00001eb246340 Zea mays HOM05D001304 ORTHO05D008890 1.7e-43 179.9 141 64.5
Os02g0600200 Oryza sativa ssp. japonica HOM05D001304 ORTHO05D008890 4.9e-43 178.3 145 64.1
Cfa021197 Carpinus fangiana HOM05D001304 ORTHO05D008890 1.6e-41 173.3 141 68.1
Actinidia24567 Actinidia chinensis HOM05D001304 ORTHO05D008890 2.1e-38 162.9 133 66.2
Cpa.g.c30628.2 Carica papaya HOM05D001304 ORTHO05D008890 4.8e-38 161.8 140 62.9
DCAR_026486 Daucus carota HOM05D000468 ORTHO05D008890 1.2e-36 157.1 136 61.8
SEGI_40444 Sequoiadendron giganteum HOM05D001304 ORTHO05D008890 3.2e-34 149.1 145 53.1
Hma1.2p1_0079F.1_g041530 Hydrangea macrophylla HOM05D001304 ORTHO05D008890 2.7e-33 146.0 140 61.4
Psat5g093920 Pisum sativum HOM05D001304 ORTHO05D008890 8.7e-32 141.0 75 90.7
arahy.Tifrunner.gnm1.ann1.Q18UTF Arachis hypogaea HOM05D001304 ORTHO05D008890 3.3e-31 139.0 92 76.1
Pp3c14_9580 Physcomitrium patens HOM05D001304 ORTHO05D008890 2.2e-30 136.3 139 47.5
Mapoly0101s0039 Marchantia polymorpha HOM05D001304 ORTHO05D008890 2.4e-29 132.9 153 44.4
AagrBONN_evm.TU.Sc2ySwM_368.469 Anthoceros agrestis HOM05D001304 ORTHO05D008890 7.6e-28 127.9 144 45.8
Duzib248G0877 Durio zibethinus HOM05D001304 ORTHO05D008890 3.8e-27 125.6 83 75.9
CBR_g28672 Chara braunii HOM05D001304 ORTHO05D008890 7.9e-25 117.9 106 50.9
MBI06_g05241_MAGBIO Magnolia biondii HOM05D001304 ORTHO05D008890 1.3e-24 117.1 91 69.2
SMO367G0665 Selaginella moellendorffii HOM05D001304 ORTHO05D008890 4.1e-21 105.5 110 44.5
Oeu009356.1 Olea europaea HOM05D001304 ORTHO05D008890 9.4e-18 94.4 57 80.7
MELO3C010716.2 Cucumis melo HOM05D001304 ORTHO05D008890 1.2e-17 94.0 46 93.5
PRCOL_00000361 Prasinoderma coloniale HOM05D001304 ORTHO05D008890 9.4e-10 67.8 116 28.4
MCO01G115 Micromonas commoda HOM05D001304 ORTHO05D008890 1.3e-06 57.4 125 24.8


User provided reference genes

Program Settings