Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16084 Vaccinium macrocarpon HOM05D007298 ORTHO05D009226 4.7e-163 577.8 289 100.0
Rhsim12G0097800 Rhododendron simsii HOM05D007298 ORTHO05D009226 5.4e-127 458.0 274 84.7
Actinidia30606 Actinidia chinensis HOM05D007298 ORTHO05D009226 2.3e-85 319.7 287 62.7
CSS0015764 Camellia sinensis var. sinensis HOM05D007298 ORTHO05D009226 5.7e-84 315.1 292 64.4
Hma1.2p1_1436F.1_g283160 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 3.4e-81 305.8 292 62.0
Thecc.03G118900 Theobroma cacao HOM05D007298 ORTHO05D009226 7.9e-78 294.7 295 57.6
CiPaw.13G179900 Carya illinoinensis HOM05D007298 ORTHO05D009226 9.7e-76 287.7 288 59.7
Sabra01G0000900 Salix brachista HOM05D007298 ORTHO05D009226 1.4e-74 283.9 299 57.5
Actinidia09612 Actinidia chinensis HOM05D007298 ORTHO05D009226 2.6e-73 279.6 281 60.9
Cfa009528 Carpinus fangiana HOM05D007298 ORTHO05D009226 2.6e-73 279.6 299 58.5
Gohir.D12G189800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 4.2e-71 272.3 291 54.0
Gohir.A12G186800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 1.2e-70 270.8 291 53.3
Gorai.008G203600 Gossypium raimondii HOM05D007298 ORTHO05D009226 2.7e-70 269.6 291 53.3
COL.COLO4_37432 Corchorus olitorius HOM05D007298 ORTHO05D009226 3.6e-70 269.2 300 55.0
Potri.001G001000 Populus trichocarpa HOM05D007298 ORTHO05D009226 3.0e-69 266.2 281 55.5
Cc11_g17470 Coffea canephora HOM05D007298 ORTHO05D009226 8.8e-69 264.6 296 55.1
Duzib205G1649 Durio zibethinus HOM05D007298 ORTHO05D009226 5.7e-68 261.9 293 55.3
TAR623G1587 Trochodendron aralioides HOM05D007298 ORTHO05D009226 4.8e-67 258.8 275 57.8
MBI13_g02430_MAGBIO Magnolia biondii HOM05D007298 ORTHO05D009226 7.7e-65 251.5 288 53.5
Peaxi162Scf00128g01770 Petunia axillaris HOM05D007298 ORTHO05D009226 2.2e-64 250.0 293 50.9
Lj4g0005920 Lotus japonicus HOM05D007298 ORTHO05D009226 6.5e-64 248.4 275 53.8
Phvul.002G230700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 6.5e-64 248.4 288 52.4
VMungo0251G1522 Vigna mungo HOM05D007298 ORTHO05D009226 6.5e-64 248.4 293 52.6
Nitab4.5_0008442g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 8.5e-64 248.1 301 49.2
Nn2g15906 Nelumbo nucifera HOM05D007298 ORTHO05D009226 1.1e-63 247.7 298 54.7
Nitab4.5_0007554g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 1.1e-63 247.7 297 49.5
Aqoxy2G04036 Aquilegia oxysepala HOM05D007298 ORTHO05D009226 6.8e-61 238.4 293 50.5
MELO3C026268.2 Cucumis melo HOM05D007298 ORTHO05D009226 8.8e-61 238.0 288 52.1
CsaV3_1G001220 Cucumis sativus L. HOM05D007298 ORTHO05D009226 1.2e-60 237.7 288 51.7
ClCG06G017280 Citrullus lanatus HOM05D007298 ORTHO05D009226 2.0e-60 236.9 273 53.5
Lalb_Chr16g0383911 Lupinus albus HOM05D007298 ORTHO05D009226 5.7e-60 235.3 280 50.7
Haze_22918 Corylus avellana HOM05D007298 ORTHO05D009226 1.3e-59 234.2 299 53.8
PGSC0003DMG400025413 Solanum tuberosum HOM05D007298 ORTHO05D009226 1.3e-59 234.2 290 49.0
Psat7g113280 Pisum sativum HOM05D007298 ORTHO05D009226 3.7e-59 232.6 295 50.5
Sed0017427 Sechium edule HOM05D007298 ORTHO05D009226 4.8e-59 232.3 288 51.0
Nn7g35796 Nelumbo nucifera HOM05D007298 ORTHO05D009226 6.3e-59 231.9 289 51.2
TPR.G16338 Trifolium pratense HOM05D007298 ORTHO05D009226 1.1e-58 231.1 283 52.3
Lalb_Chr09g0327771 Lupinus albus HOM05D007298 ORTHO05D009226 2.4e-58 229.9 280 51.1
TWI32G0891 Tripterygium wilfordii HOM05D007298 ORTHO05D009226 9.1e-58 228.0 275 51.6
Glyma.07G199400 Glycine max HOM05D007298 ORTHO05D009226 1.2e-57 227.6 292 49.3
Medtr4g088515 Medicago truncatula HOM05D000062 ORTHO05D000043 1.2e-57 227.6 280 51.8
Nitab4.5_0001600g0070 Nicotiana tabacum HOM05D005538 ORTHO05D007055 1.2e-57 227.6 282 49.3
PGR119G1464 Punica granatum HOM05D007298 ORTHO05D009226 3.2e-55 219.5 279 51.6
Ca_18576_v3 Cicer arietinum L. HOM05D007298 ORTHO05D009226 9.4e-55 218.0 281 48.8
QL01p007822 Quercus lobata HOM05D007298 ORTHO05D009226 9.4e-55 218.0 284 48.6
Glyma.13G177000 Glycine max HOM05D007298 ORTHO05D009226 1.2e-54 217.6 289 49.8
Lalb_Chr05g0218531 Lupinus albus HOM05D007298 ORTHO05D009226 2.7e-54 216.5 286 47.2
arahy.Tifrunner.gnm1.ann1.IS7ZQD Arachis hypogaea HOM05D002349 ORTHO05D002464 5.2e-53 212.2 295 46.4
arahy.Tifrunner.gnm1.ann1.MB6W4F Arachis hypogaea HOM05D002349 ORTHO05D002464 5.2e-53 212.2 295 46.4
Eucgr.J01725 Eucalyptus grandis HOM05D007298 ORTHO05D009226 2.6e-52 209.9 296 49.3
Sopen05g018720 Solanum pennellii HOM05D007298 ORTHO05D009226 5.7e-52 208.8 281 45.6
Dinv31519 Davidia involucrata HOM05D007298 ORTHO05D009226 2.8e-51 206.5 256 54.3
Ciclev10017525m.g Citrus clementina HOM05D007298 ORTHO05D009226 1.1e-50 204.5 252 52.4
Solyc05g024020.1 Solanum lycopersicum HOM05D007298 ORTHO05D009226 3.1e-50 203.0 277 45.8
Manes.15G111000 Manihot esculenta HOM05D007298 ORTHO05D009226 9.1e-50 201.4 295 47.1
Hma1.2p1_0459F.1_g157260 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 1.7e-48 197.2 245 51.8
Migut.K01030 Erythranthe guttata HOM05D007298 ORTHO05D009226 2.3e-48 196.8 275 46.5
Sc05g0003880 Simmondsia chinensis HOM05D007298 ORTHO05D009226 2.3e-48 196.8 292 46.9
Carub.0007s1454 Capsella rubella HOM05D007298 ORTHO05D009226 6.6e-48 195.3 310 46.5
AT4G26415 Arabidopsis thaliana HOM05D007298 ORTHO05D009226 2.1e-46 190.3 311 44.1
Sp7g24320 Schrenkiella parvula HOM05D007298 ORTHO05D009226 1.4e-45 187.6 312 44.6
C07p54880 Brassica napus HOM05D007298 ORTHO05D009226 6.8e-45 185.3 312 43.9
BolC7t45976H Brassica oleracea HOM05D007298 ORTHO05D009226 6.8e-45 185.3 312 43.9
AL7G26540 Arabidopsis lyrata HOM05D007298 ORTHO05D009226 5.7e-44 182.2 292 44.5
AUR62008624 Chenopodium quinoa HOM05D007298 ORTHO05D009226 5.7e-44 182.2 258 46.5
THA.LOC104813474 Tarenaya hassleriana HOM05D007298 ORTHO05D009226 7.5e-44 181.8 307 41.7
Lsat_1_v5_gn_4_2201 Lactuca sativa HOM05D007298 ORTHO05D009226 9.8e-44 181.4 287 42.5
A03p56680 Brassica napus HOM05D007298 ORTHO05D009226 1.3e-43 181.0 311 43.4
BraA03t14738Z Brassica rapa HOM05D007298 ORTHO05D009226 1.3e-43 181.0 311 43.4
Cpa.g.sc119.13 Carica papaya HOM05D007298 ORTHO05D009226 1.3e-43 181.0 282 45.4
CARHR233970 Cardamine hirsuta HOM05D007298 ORTHO05D009226 1.7e-43 180.6 298 47.0
RcHm_v2.0_Chr5g0084091 Rosa chinensis HOM05D007298 ORTHO05D009226 3.7e-43 179.5 366 40.2
BcaC06g32750 Brassica carinata HOM05D007298 ORTHO05D009226 7.0e-42 175.3 292 43.5
Thhalv10026008m.g Eutrema salsugineum HOM05D007298 ORTHO05D009226 1.2e-41 174.5 291 44.7
MD11G1000700 Malus domestica HOM05D007298 ORTHO05D009226 1.7e-40 170.6 285 45.3
ATR0068G085 Amborella trichopoda HOM05D007298 ORTHO05D009226 2.9e-40 169.9 331 40.2
Duzib084G1143 Durio zibethinus HOM05D007298 ORTHO05D009226 3.9e-40 169.5 210 51.9
FvH4_3g45980 Fragaria vesca HOM05D007298 ORTHO05D009226 6.6e-40 168.7 318 40.6
FAN16G2589 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.5e-39 167.5 320 40.3
AUR62033147 Chenopodium quinoa HOM05D007298 ORTHO05D009226 2.5e-39 166.8 242 46.3
BcaNung02423 Brassica carinata HOM05D007298 ORTHO05D009226 9.5e-39 164.9 302 42.4
DCAR_006996 Daucus carota HOM05D007298 ORTHO05D009226 1.6e-38 164.1 257 44.4
EL10Ac4g07728 Beta vulgaris HOM05D007298 ORTHO05D009226 2.1e-38 163.7 250 46.8
SGA_v2.0_scaffold9G04794 Striga asiatica HOM05D002076 ORTHO05D002087 5.2e-37 159.1 282 42.9
Sed0020092 Sechium edule HOM05D007298 ORTHO05D009226 6.8e-37 158.7 224 48.7
Ah.08g213460 Amaranthus hybridus HOM05D007298 ORTHO05D009226 7.5e-36 155.2 277 41.2
Prupe.6G001000 Prunus persica HOM05D007298 ORTHO05D009226 3.7e-35 152.9 329 38.6
SalBow2G0405 Salvia bowleyana HOM05D007298 ORTHO05D009226 3.2e-34 149.8 260 39.2
SalBow2G1404 Salvia bowleyana HOM05D007298 ORTHO05D009226 3.2e-34 149.8 260 39.2
DCAR_006994 Daucus carota HOM05D007298 ORTHO05D009226 2.0e-33 147.1 243 43.2
FAN21G1139 Fragaria x ananassa HOM05D007298 ORTHO05D009226 2.0e-33 147.1 305 38.7
HanXRQChr12g0385721 Helianthus annuus HOM05D007298 ORTHO05D009226 2.0e-33 147.1 250 41.2
FAN11G2203 Fragaria x ananassa HOM05D007298 ORTHO05D009226 6.0e-33 145.6 302 38.7
CANSAT11G1103 Cannabis sativa HOM05D007298 ORTHO05D009226 6.6e-32 142.1 251 44.6
FAN25G2175 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.1e-31 141.4 262 40.8
unitig_22.g6385 Utricularia gibba HOM05D007298 ORTHO05D009226 8.0e-30 135.2 209 43.5
Zm00001eb127960 Zea mays HOM05D007298 ORTHO05D009226 5.4e-26 122.5 276 37.0
Glyma.13G237100 Glycine max HOM05D007298 ORTHO05D009226 3.6e-22 109.8 131 52.7
Glyma.15G076400 Glycine max HOM05D007298 ORTHO05D009226 8.1e-22 108.6 222 39.2
CDE07G0295 Ceratophyllum demersum HOM05D000114 ORTHO05D000038 5.1e-16 89.4 137 44.5
Phvul.006G183700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 1.2e-14 84.7 152 42.1
Nitab4.5_0000340g0060 Nicotiana tabacum HOM05D007298 ORTHO05D009226 9.9e-12 75.1 98 46.9
BcaC09g50696 Brassica carinata HOM05D007298 ORTHO05D009226 5.6e-07 59.3 62 48.4
C01p22230 Brassica napus HOM05D007298 ORTHO05D009226 5.6e-07 59.3 62 48.4
BolC1t02153H Brassica oleracea HOM05D007298 ORTHO05D009226 5.6e-07 59.3 62 48.4


User provided reference genes

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