Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16067 Vaccinium macrocarpon HOM05D028256 ORTHO05D000283 8.4e-148 526.9 254 100.0
RhsimUnG0244100 Rhododendron simsii HOM05D001219 ORTHO05D001017 1.4e-14 84.3 70 47.1
Rhsim09G0057800 Rhododendron simsii HOM05D000003 ORTHO05D000283 2.4e-14 83.6 60 58.3
THA.LOC104815125 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 1.0e-12 78.2 107 36.4
THA.LOC104816716 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 1.3e-12 77.8 72 47.2
RhsimUnG0092200 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.9e-11 73.9 63 47.6
THA.LOC104825816 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 4.3e-11 72.8 77 42.9
ECA246G5243 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.6e-11 72.4 100 34.0
BcaB05g25304 Brassica carinata HOM05D000003 ORTHO05D000283 7.4e-11 72.0 121 33.9
THA.LOC104801610 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 9.6e-11 71.6 77 41.6
AT5G18880 Arabidopsis thaliana HOM05D000003 ORTHO05D000283 2.8e-10 70.1 69 44.9
Dinv04241 Davidia involucrata HOM05D013547 ORTHO05D000283 2.8e-10 70.1 78 41.0
BcaB06g27122 Brassica carinata HOM05D000003 ORTHO05D000283 3.6e-10 69.7 73 38.4
BcaB04g17521 Brassica carinata HOM05D000003 ORTHO05D000283 1.4e-09 67.8 133 30.8
THA.LOC104798663 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 2.4e-09 67.0 71 43.7
BcaC09g50945 Brassica carinata HOM05D000003 ORTHO05D000007 4.0e-09 66.2 99 37.4
CSS0022152 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.0e-09 66.2 76 39.5
Oeu023303.1 Olea europaea HOM05D000003 ORTHO05D000283 4.0e-09 66.2 108 30.6
BcaB04g19079 Brassica carinata HOM05D000003 ORTHO05D000283 5.3e-09 65.9 130 28.5
ECA233G4961 Erigeron canadensis HOM05D000003 ORTHO05D000283 5.3e-09 65.9 103 35.9
Oeu010858.1 Olea europaea HOM05D000003 ORTHO05D000283 5.3e-09 65.9 77 37.7
BcaB05g24536 Brassica carinata HOM05D000003 ORTHO05D000283 6.9e-09 65.5 129 30.2
vmacro04209 Vaccinium macrocarpon HOM05D028256 ORTHO05D000283 6.9e-09 65.5 76 42.1
PSO170G0824 Papaver somniferum HOM05D000003 ORTHO05D000004 9.0e-09 65.1 140 30.0
ECA146G0003 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.2e-08 64.7 139 28.8
ECA201G0004 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.2e-08 64.7 139 28.8
BcaC05g26562 Brassica carinata HOM05D000003 ORTHO05D000283 1.5e-08 64.3 71 39.4
BcaC06g34146 Brassica carinata HOM05D000003 ORTHO05D000283 1.5e-08 64.3 130 30.8
Carub.0007s1219 Capsella rubella HOM05D000003 ORTHO05D000283 2.0e-08 63.9 71 39.4
PSO017G3479 Papaver somniferum HOM05D000003 ORTHO05D000004 2.0e-08 63.9 105 27.6
vmacro03128 Vaccinium macrocarpon HOM05D000003 ORTHO05D000283 2.0e-08 63.9 67 44.8
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 2.6e-08 63.5 123 36.6
Dinv08036 Davidia involucrata HOM05D005867 ORTHO05D007273 3.4e-08 63.2 51 47.1
Aqoxy5G02532 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.5e-08 62.8 85 36.5
Aqoxy7G02554 Aquilegia oxysepala HOM05D000003 ORTHO05D000283 4.5e-08 62.8 95 31.6
Oeu054808.1 Olea europaea HOM05D000003 ORTHO05D000283 4.5e-08 62.8 69 40.6
BcaC04g23526 Brassica carinata HOM05D000003 ORTHO05D000007 5.8e-08 62.4 61 47.5
HanXRQChr03g0079511 Helianthus annuus HOM05D000003 ORTHO05D000004 5.8e-08 62.4 123 33.3
Hma1.2p1_0785F.1_g217500 Hydrangea macrophylla HOM05D008623 ORTHO05D007789 5.8e-08 62.4 96 40.6
Oeu001880.1 Olea europaea HOM05D000003 ORTHO05D000283 5.8e-08 62.4 69 40.6
BcaC08g44386 Brassica carinata HOM05D000003 ORTHO05D000283 9.9e-08 61.6 65 47.7
BolC9t58165H Brassica oleracea HOM05D000003 ORTHO05D000283 9.9e-08 61.6 134 32.8
HanXRQChr01g0016641 Helianthus annuus HOM05D000003 ORTHO05D000004 9.9e-08 61.6 52 42.3
Potri.010G000101 Populus trichocarpa HOM05D000003 ORTHO05D000004 9.9e-08 61.6 78 41.0
AL96U10010 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 1.3e-07 61.2 63 39.7
BcaB02g11468 Brassica carinata HOM05D000003 ORTHO05D000283 1.3e-07 61.2 65 43.1
BcaC07g42435 Brassica carinata HOM05D000003 ORTHO05D000283 1.3e-07 61.2 71 43.7
BolC1t01970H Brassica oleracea HOM05D000003 ORTHO05D000283 1.7e-07 60.8 65 41.5
Dinv05579 Davidia involucrata HOM05D000003 ORTHO05D000283 1.7e-07 60.8 77 39.0
Dinv24659 Davidia involucrata HOM05D024841 ORTHO05D000283 1.7e-07 60.8 62 37.1
Rhsim06G0005500 Rhododendron simsii HOM05D028256 ORTHO05D340175 1.7e-07 60.8 111 38.7
THA.LOC104820083 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 1.7e-07 60.8 136 29.4
BcaB02g10680 Brassica carinata HOM05D000003 ORTHO05D000283 2.2e-07 60.5 59 52.5
BcaC09g50223 Brassica carinata HOM05D000003 ORTHO05D000283 2.2e-07 60.5 116 27.6
BolC3t20403H Brassica oleracea HOM05D000003 ORTHO05D000283 2.2e-07 60.5 67 46.3
ECA238G3545 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.2e-07 60.5 93 31.2
Rhsim11G0029500 Rhododendron simsii HOM05D000003 ORTHO05D000283 2.2e-07 60.5 111 27.9
vmacro07114 Vaccinium macrocarpon HOM05D000003 ORTHO05D000283 2.2e-07 60.5 80 33.8
vmacro23049 Vaccinium macrocarpon HOM05D005018 ORTHO05D006786 2.2e-07 60.5 56 44.6
BcaB02g08653 Brassica carinata HOM05D000003 ORTHO05D000283 2.9e-07 60.1 83 31.3
CiPaw.10G108400 Carya illinoinensis HOM05D010787 ORTHO05D011812 2.9e-07 60.1 105 40.0
ECA238G2807 Erigeron canadensis HOM05D000432 ORTHO05D000320 2.9e-07 60.1 68 33.8
ECA238G4813 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.9e-07 60.1 64 40.6
PSO423G0058 Papaver somniferum HOM05D000003 ORTHO05D000004 2.9e-07 60.1 54 42.6
Rhsim06G0134100 Rhododendron simsii HOM05D000020 ORTHO05D000156 2.9e-07 60.1 51 49.0
RhsimUnG0244600 Rhododendron simsii HOM05D000020 ORTHO05D000156 2.9e-07 60.1 51 49.0
THA.LOC104821877 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 2.9e-07 60.1 93 35.5
THA.LOC109116242 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 2.9e-07 60.1 72 37.5
AL1G56270 Arabidopsis lyrata HOM05D005950 ORTHO05D000283 3.8e-07 59.7 70 40.0
BcaC03g18409 Brassica carinata HOM05D000003 ORTHO05D000283 3.8e-07 59.7 52 44.2
ECA234G1739 Erigeron canadensis HOM05D000003 ORTHO05D000283 3.8e-07 59.7 71 35.2
ECA236G2229 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.8e-07 59.7 85 30.6
ECA238G4393 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.8e-07 59.7 134 24.6
PGR044G2585 Punica granatum HOM05D000003 ORTHO05D000283 3.8e-07 59.7 77 36.4
BolC6t36801H Brassica oleracea HOM05D000003 ORTHO05D000283 4.9e-07 59.3 77 40.3
BolC9t56630H Brassica oleracea HOM05D000003 ORTHO05D000283 4.9e-07 59.3 68 42.6
BraA01t02789Z Brassica rapa HOM05D000003 ORTHO05D000283 4.9e-07 59.3 120 30.8
BraA05t20329Z Brassica rapa HOM05D000003 ORTHO05D000004 4.9e-07 59.3 65 41.5
AL3G43240 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 6.4e-07 58.9 84 35.7
BcaB03g13757 Brassica carinata HOM05D000003 ORTHO05D000283 6.4e-07 58.9 86 31.4
BolC2t07353H Brassica oleracea HOM05D000003 ORTHO05D000283 6.4e-07 58.9 64 43.8
BolC5t30702H Brassica oleracea HOM05D000003 ORTHO05D000283 6.4e-07 58.9 52 48.1
CiPaw.10G106200 Carya illinoinensis HOM05D010787 ORTHO05D011812 6.4e-07 58.9 110 39.1
THA.LOC104820715 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 6.4e-07 58.9 141 29.8
C05p60790 Brassica napus HOM05D000003 ORTHO05D000283 8.4e-07 58.5 72 37.5
BolC3t17071H Brassica oleracea HOM05D000003 ORTHO05D000283 8.4e-07 58.5 70 37.1
BolC3t17602H Brassica oleracea HOM05D000003 ORTHO05D000283 8.4e-07 58.5 64 42.2
BraA10t42574Z Brassica rapa HOM05D000003 ORTHO05D000283 8.4e-07 58.5 67 41.8
Carub.0005s1087 Capsella rubella HOM05D000003 ORTHO05D000283 8.4e-07 58.5 49 49.0
PSO210G1366 Papaver somniferum HOM05D000003 ORTHO05D000004 8.4e-07 58.5 81 29.6
Rhsim12G0199400 Rhododendron simsii HOM05D009663 ORTHO05D007789 8.4e-07 58.5 90 37.8
Sabra18G0037800 Salix brachista HOM05D003631 ORTHO05D000007 8.4e-07 58.5 137 29.2
Aqoxy4G01255 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.1e-06 58.2 57 42.1
BcaC07g40570 Brassica carinata HOM05D000003 ORTHO05D000283 1.1e-06 58.2 53 45.3
BcaC08g44971 Brassica carinata HOM05D000003 ORTHO05D000004 1.1e-06 58.2 110 32.7
PSO675G3215 Papaver somniferum HOM05D000003 ORTHO05D000283 1.1e-06 58.2 55 40.0
Rhsim12G0194400 Rhododendron simsii HOM05D000003 ORTHO05D000283 1.1e-06 58.2 53 50.9
BcaC05g25052 Brassica carinata HOM05D000003 ORTHO05D000283 1.4e-06 57.8 72 36.1
BcaC09g49882 Brassica carinata HOM05D000003 ORTHO05D000283 1.4e-06 57.8 71 35.2
Dinv01210 Davidia involucrata HOM05D000003 ORTHO05D000283 1.4e-06 57.8 146 28.8
Dinv01211 Davidia involucrata HOM05D000003 ORTHO05D000283 1.4e-06 57.8 146 28.8
PSO478G1074 Papaver somniferum HOM05D000003 ORTHO05D000004 1.4e-06 57.8 50 48.0
Aqoxy7G03415 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.9e-06 57.4 98 31.6
BolC4t23916H Brassica oleracea HOM05D000003 ORTHO05D000283 1.9e-06 57.4 78 33.3
PSO674G0089 Papaver somniferum HOM05D000003 ORTHO05D000004 1.9e-06 57.4 64 34.4
PGR004G2097 Punica granatum HOM05D000003 ORTHO05D000283 1.9e-06 57.4 119 24.4
PGR119G1009 Punica granatum HOM05D000003 ORTHO05D000283 1.9e-06 57.4 54 44.4
Rhsim07G0120100 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.9e-06 57.4 90 33.3
Aqoxy2G00510 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.4e-06 57.0 84 34.5
BcaC03g15593 Brassica carinata HOM05D000003 ORTHO05D000283 2.4e-06 57.0 65 38.5
BcaNung06273 Brassica carinata HOM05D000003 ORTHO05D012422 2.4e-06 57.0 67 37.3
ECA233G5705 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.4e-06 57.0 70 34.3
ECA246G3468 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.4e-06 57.0 55 36.4
PSO063G1064 Papaver somniferum HOM05D000003 ORTHO05D000283 2.4e-06 57.0 72 30.6
Sabra07G0063500 Salix brachista HOM05D000003 ORTHO05D000283 2.4e-06 57.0 77 33.8
BolC7t40742H Brassica oleracea HOM05D000003 ORTHO05D000283 3.2e-06 56.6 67 41.8
BolC9t54942H Brassica oleracea HOM05D000003 ORTHO05D000283 3.2e-06 56.6 64 42.2
ECA238G1731 Erigeron canadensis HOM05D000663 ORTHO05D000834 3.2e-06 56.6 101 26.7
ECA240G4579 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.2e-06 56.6 103 25.2
Rhsim03G0090200 Rhododendron simsii HOM05D001219 ORTHO05D000283 3.2e-06 56.6 44 47.7
THA.LOC104803385 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 3.2e-06 56.6 66 37.9
Atru.chr10.517 Acer truncatum HOM05D000003 ORTHO05D000283 4.2e-06 56.2 101 29.7
EL10Ac5g11648 Beta vulgaris HOM05D000003 ORTHO05D000283 4.2e-06 56.2 117 31.6
BcaC02g10916 Brassica carinata HOM05D000003 ORTHO05D000283 4.2e-06 56.2 53 45.3
BolC9t57361H Brassica oleracea HOM05D000003 ORTHO05D000283 4.2e-06 56.2 66 42.4
CSS0007060 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000283 4.2e-06 56.2 73 38.4
ECA233G2180 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.2e-06 56.2 108 26.9
ECA247G2846 Erigeron canadensis HOM05D001055 ORTHO05D000867 4.2e-06 56.2 74 29.7
PGR142G0882 Punica granatum HOM05D000003 ORTHO05D000004 4.2e-06 56.2 63 41.3
THA.LOC104825769 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 4.2e-06 56.2 74 37.8
Aqoxy4G00430 Aquilegia oxysepala HOM05D000003 ORTHO05D000283 5.5e-06 55.8 67 38.8
AL1G60290 Arabidopsis lyrata HOM05D064363 ORTHO05D000283 5.5e-06 55.8 71 39.4
AL4G12860 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 5.5e-06 55.8 71 36.6
AL8G14770 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 5.5e-06 55.8 49 46.9
BraA04t17757Z Brassica rapa HOM05D000003 ORTHO05D000283 5.5e-06 55.8 64 35.9
Duzib106G0495 Durio zibethinus HOM05D000071 ORTHO05D000029 5.5e-06 55.8 79 39.2
ECA247G0539 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.5e-06 55.8 75 33.3
PSO017G6417 Papaver somniferum HOM05D000003 ORTHO05D000283 5.5e-06 55.8 91 34.1
Aqoxy1G03910 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 7.1e-06 55.5 56 42.9
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 7.1e-06 55.5 65 44.6
HanXRQChr09g0251101 Helianthus annuus HOM05D000003 ORTHO05D000004 7.1e-06 55.5 50 38.0
Lju124C40G7 Lonicera japonica HOM05D001129 ORTHO05D003157 7.1e-06 55.5 65 36.9
PSO017G3756 Papaver somniferum HOM05D000003 ORTHO05D000283 7.1e-06 55.5 91 31.9
PSO357G0071 Papaver somniferum HOM05D000003 ORTHO05D000283 7.1e-06 55.5 48 43.8
PSO478G0054 Papaver somniferum HOM05D000003 ORTHO05D000004 7.1e-06 55.5 61 41.0
Sabra01G0063500 Salix brachista HOM05D000003 ORTHO05D000283 7.1e-06 55.5 78 35.9
THA.LOC104808366 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 7.1e-06 55.5 51 49.0
Aqoxy15s001 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 9.3e-06 55.1 76 31.6
BcaB07g31154 Brassica carinata HOM05D000003 ORTHO05D000283 9.3e-06 55.1 77 37.7
BcaC07g42553 Brassica carinata HOM05D000003 ORTHO05D000283 9.3e-06 55.1 74 32.4
BolC1t04817H Brassica oleracea HOM05D000003 ORTHO05D000283 9.3e-06 55.1 69 39.1
BraA02t06658Z Brassica rapa HOM05D000003 ORTHO05D000283 9.3e-06 55.1 136 27.2
BraA06t26517Z Brassica rapa HOM05D000003 ORTHO05D000283 9.3e-06 55.1 69 34.8
CSS0025070 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000283 9.3e-06 55.1 58 41.4
CSS0035302 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000283 9.3e-06 55.1 73 38.4
CiPaw.10G106000 Carya illinoinensis HOM05D010787 ORTHO05D011812 9.3e-06 55.1 110 37.3
Oeu010859.1 Olea europaea HOM05D000003 ORTHO05D000004 9.3e-06 55.1 52 44.2
Sp1g31420 Schrenkiella parvula HOM05D000003 ORTHO05D000283 9.3e-06 55.1 69 31.9
Sp4g10390 Schrenkiella parvula HOM05D000003 ORTHO05D000283 9.3e-06 55.1 58 44.8


User provided reference genes

Program Settings