Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 3.6e-163 578.2 293 100.0
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 9.5e-79 297.7 177 85.3
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 4.0e-77 292.4 177 83.6
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 6.8e-77 291.6 177 82.5
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 6.8e-77 291.6 177 82.5
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 8.9e-77 291.2 177 83.6
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 1.2e-76 290.8 177 82.5
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 2.0e-76 290.0 177 81.9
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 4.4e-76 288.9 177 81.4
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 5.8e-76 288.5 177 81.4
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 7.5e-76 288.1 177 80.8
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 9.8e-76 287.7 177 81.4
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 1.3e-75 287.3 177 79.7
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 8.3e-75 284.6 177 79.7
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 1.9e-74 283.5 177 79.1
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 2.4e-74 283.1 177 78.5
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 4.1e-74 282.3 177 78.0
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 4.1e-74 282.3 177 78.0
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 7.0e-74 281.6 177 80.8
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 7.0e-74 281.6 200 71.5
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 1.2e-73 280.8 177 76.8
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 1.2e-73 280.8 177 79.1
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 1.6e-73 280.4 200 71.5
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 2.7e-73 279.6 177 78.5
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 2.7e-73 279.6 177 77.4
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 4.6e-73 278.9 177 78.5
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 7.8e-73 278.1 176 80.1
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 1.0e-72 277.7 200 71.5
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 1.0e-72 277.7 186 75.8
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 1.0e-72 277.7 200 71.5
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 1.0e-72 277.7 177 76.3
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 1.3e-72 277.3 177 78.0
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 1.3e-72 277.3 177 77.4
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 3.0e-72 276.2 177 75.7
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 3.0e-72 276.2 177 76.8
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 3.0e-72 276.2 177 78.5
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 3.9e-72 275.8 177 79.1
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 3.9e-72 275.8 185 75.1
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 5.1e-72 275.4 176 79.0
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 6.6e-72 275.0 177 78.5
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 6.6e-72 275.0 177 76.8
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 6.6e-72 275.0 177 75.1
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 6.6e-72 275.0 177 75.7
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 6.6e-72 275.0 177 76.3
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 8.6e-72 274.6 176 78.4
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 8.6e-72 274.6 177 76.3
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 8.6e-72 274.6 177 78.5
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 1.1e-71 274.2 176 79.0
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 1.1e-71 274.2 177 74.0
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 1.5e-71 273.9 177 77.4
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 2.5e-71 273.1 177 75.7
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 4.3e-71 272.3 177 75.7
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 5.6e-71 271.9 177 76.8
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 7.3e-71 271.6 177 77.4
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 7.3e-71 271.6 177 76.3
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 7.3e-71 271.6 177 76.8
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 7.3e-71 271.6 177 77.4
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 1.2e-70 270.8 176 77.3
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 1.2e-70 270.8 177 77.4
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 1.2e-70 270.8 177 77.4
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 1.2e-70 270.8 177 73.4
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 1.2e-70 270.8 177 72.9
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 1.2e-70 270.8 177 75.1
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 1.6e-70 270.4 177 76.3
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 2.8e-70 269.6 177 76.8
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 2.8e-70 269.6 177 76.8
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 4.7e-70 268.9 177 76.8
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 4.7e-70 268.9 177 77.4
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 4.7e-70 268.9 177 76.8
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 4.7e-70 268.9 177 76.8
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 4.7e-70 268.9 177 74.6
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 6.2e-70 268.5 176 76.7
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 1.1e-69 267.7 177 73.4
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 1.4e-69 267.3 167 77.8
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 2.3e-69 266.5 177 76.8
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 2.3e-69 266.5 177 74.0
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 4.0e-69 265.8 176 76.1
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 5.2e-69 265.4 167 80.8
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 8.9e-69 264.6 177 75.1
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 2.0e-68 263.5 255 60.8
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 2.6e-68 263.1 177 74.0
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 7.5e-68 261.5 171 74.9
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 1.3e-67 260.8 177 71.2
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 2.2e-67 260.0 178 73.0
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 2.2e-67 260.0 177 73.4
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 7.1e-66 255.0 177 70.6
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 1.7e-64 250.4 153 78.4
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 8.6e-64 248.1 159 81.1
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 5.2e-61 238.8 177 63.3
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 4.4e-60 235.7 182 70.9
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 5.8e-60 235.3 153 77.8
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 4.9e-59 232.3 178 62.9
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 8.4e-59 231.5 178 63.5
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 1.2e-57 227.6 177 61.0
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 2.8e-54 216.5 177 64.4
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 2.7e-49 199.9 175 55.4
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 3.5e-49 199.5 170 62.4
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 1.2e-44 184.5 106 85.8
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 5.8e-44 182.2 156 62.8
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 5.8e-44 182.2 107 81.3
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 2.9e-43 179.9 159 61.6
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 6.4e-43 178.7 106 82.1
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 1.9e-42 177.2 142 69.0
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 4.8e-38 162.5 117 65.0
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 5.1e-32 142.5 79 82.3
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 4.8e-30 136.0 259 33.6
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 9.0e-29 131.7 191 41.9
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 1.2e-25 121.3 80 78.8
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 1.2e-20 104.8 201 36.3
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 7.7e-20 102.1 207 33.8
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 2.7e-17 93.6 64 67.2
Nn179s44626 Nelumbo nucifera HOM05D006459 ORTHO05D008414 4.3e-15 86.3 56 80.4
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 2.8e-14 83.6 47 70.2
MELO3C033538.2 Cucumis melo HOM05D006459 ORTHO05D169875 7.4e-07 58.9 142 30.3


User provided reference genes

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