Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16037 Vaccinium macrocarpon HOM05D006333 ORTHO05D007799 1.9e-217 758.8 379 100.0
Rhsim09G0071800 Rhododendron simsii HOM05D006333 ORTHO05D007799 2.0e-57 227.3 313 47.0
CSS0049289 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 8.6e-56 221.9 331 44.7
Dinv17616 Davidia involucrata HOM05D006333 ORTHO05D007799 6.8e-53 212.2 314 44.3
Thecc.02G159600 Theobroma cacao HOM05D006333 ORTHO05D007799 1.9e-50 204.1 313 42.8
CANSAT56G2519 Cannabis sativa HOM05D006333 ORTHO05D007799 2.4e-50 203.8 313 43.1
GSVIVG01012055001 Vitis vinifera HOM05D006333 ORTHO05D007799 4.1e-50 203.0 331 42.0
CSS0015547 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 5.4e-50 202.6 120 83.3
COL.COLO4_08588 Corchorus olitorius HOM05D006333 ORTHO05D007799 5.4e-50 202.6 313 42.5
Sopen02g004090 Solanum pennellii HOM05D006333 ORTHO05D007799 5.4e-50 202.6 313 41.9
Hma1.2p1_0044F.1_g026090 Hydrangea macrophylla HOM05D006333 ORTHO05D007799 7.0e-50 202.2 312 42.3
Ciclev10032700m.g Citrus clementina HOM05D006333 ORTHO05D007799 1.2e-49 201.4 313 42.5
Lj3A849G43 Lonicera japonica HOM05D006333 ORTHO05D007799 1.6e-49 201.1 313 41.2
Nn5g28807 Nelumbo nucifera HOM05D006333 ORTHO05D007799 1.6e-49 201.1 159 66.0
ECA233G4371 Erigeron canadensis HOM05D006333 ORTHO05D007799 2.0e-49 200.7 313 42.5
PSO782G2700 Papaver somniferum HOM05D006333 ORTHO05D007799 2.0e-49 200.7 313 42.2
Solyc02g014720.4 Solanum lycopersicum HOM05D006333 ORTHO05D007799 2.7e-49 200.3 313 41.5
Nitab4.5_0003092g0070 Nicotiana tabacum HOM05D006333 ORTHO05D007799 3.5e-49 199.9 313 42.2
Prupe.1G347700 Prunus persica HOM05D006333 ORTHO05D007799 3.5e-49 199.9 313 42.5
Duzib132G1109 Durio zibethinus HOM05D006333 ORTHO05D007799 4.6e-49 199.5 315 43.2
CAN.G1011.5 Capsicum annuum HOM05D006333 ORTHO05D007799 7.8e-49 198.7 313 42.2
Sed0022709 Sechium edule HOM05D006333 ORTHO05D007799 7.8e-49 198.7 313 41.2
Hund24376 Selenicereus undatus HOM05D006333 ORTHO05D007799 7.8e-49 198.7 313 40.9
HanXRQChr12g0366301 Helianthus annuus HOM05D006333 ORTHO05D007799 1.0e-48 198.4 313 42.5
CsaV3_3G031750 Cucumis sativus L. HOM05D006333 ORTHO05D007799 5.0e-48 196.1 313 41.2
Gorai.013G070000 Gossypium raimondii HOM05D006333 ORTHO05D007799 5.0e-48 196.1 313 41.5
Nitab4.5_0008825g0020 Nicotiana tabacum HOM05D006333 ORTHO05D007799 5.0e-48 196.1 313 41.5
Aqoxy3G04253 Aquilegia oxysepala HOM05D006333 ORTHO05D007799 6.6e-48 195.7 161 64.0
EL10Ac9g22952 Beta vulgaris HOM05D006333 ORTHO05D007799 6.6e-48 195.7 309 41.1
Lsat_1_v5_gn_8_33120 Lactuca sativa HOM05D006333 ORTHO05D007799 6.6e-48 195.7 163 65.6
MELO3C024016.2 Cucumis melo HOM05D006333 ORTHO05D007799 1.1e-47 194.9 313 40.9
CiPaw.05G169800 Carya illinoinensis HOM05D006333 ORTHO05D007799 1.9e-47 194.1 313 41.5
MSTRG.11948 Avicennia marina HOM05D006333 ORTHO05D007799 5.6e-47 192.6 161 63.4
Potri.007G072000 Populus trichocarpa HOM05D006333 ORTHO05D007799 5.6e-47 192.6 313 41.5
Prupe.1G347900 Prunus persica HOM05D006333 ORTHO05D007799 5.6e-47 192.6 309 41.4
RcHm_v2.0_Chr4g0446761 Rosa chinensis HOM05D006333 ORTHO05D007799 5.6e-47 192.6 160 65.6
PSO063G3232 Papaver somniferum HOM05D006333 ORTHO05D007799 9.5e-47 191.8 313 41.5
Ca_19901_v3 Cicer arietinum L. HOM05D006333 ORTHO05D007799 1.2e-46 191.4 159 64.8
Aa31LG7G2140 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.6e-46 191.0 313 40.3
Cpa.g.sc0.135 Carica papaya HOM05D006333 ORTHO05D007799 1.6e-46 191.0 165 61.8
FvH4_4g36970 Fragaria vesca HOM05D006333 ORTHO05D007799 1.6e-46 191.0 165 64.2
Gohir.A13G060400 Gossypium hirsutum HOM05D006333 ORTHO05D007799 2.1e-46 190.7 313 41.2
Lj3g0001632 Lotus japonicus HOM05D006333 ORTHO05D007799 2.8e-46 190.3 313 40.3
Lalb_Chr01g0001411 Lupinus albus HOM05D006333 ORTHO05D007799 2.8e-46 190.3 162 62.3
Eucgr.J00869 Eucalyptus grandis HOM05D006333 ORTHO05D007799 3.6e-46 189.9 318 39.9
FAN12G1853 Fragaria x ananassa HOM05D006333 ORTHO05D007799 3.6e-46 189.9 120 79.2
FAN07G1904 Fragaria x ananassa HOM05D006333 ORTHO05D007799 4.7e-46 189.5 120 78.3
Gohir.D13G061500 Gossypium hirsutum HOM05D006333 ORTHO05D007799 4.7e-46 189.5 313 41.2
Manes.04G057700 Manihot esculenta HOM05D006333 ORTHO05D007799 6.2e-46 189.1 313 40.3
Phvul.011G028900 Phaseolus vulgaris HOM05D006333 ORTHO05D007799 1.1e-45 188.3 309 40.1
TWI53G1586 Tripterygium wilfordii HOM05D006333 ORTHO05D007799 1.1e-45 188.3 160 64.4
VMungo1127G0165 Vigna mungo HOM05D006333 ORTHO05D007799 1.1e-45 188.3 159 62.3
Atru.chr11.1164 Acer truncatum HOM05D006333 ORTHO05D007799 2.3e-45 187.2 207 53.1
Glyma.12G026000 Glycine max HOM05D006333 ORTHO05D007799 3.1e-45 186.8 313 39.9
Medtr4g023480 Medicago truncatula HOM05D006333 ORTHO05D007799 4.0e-45 186.4 159 61.6
Peaxi162Scf00334g00421 Petunia axillaris HOM05D006333 ORTHO05D007799 4.0e-45 186.4 306 41.2
Psat7g233400 Pisum sativum HOM05D006333 ORTHO05D007799 5.2e-45 186.0 309 39.8
arahy.Tifrunner.gnm1.ann1.A0JP3J Arachis hypogaea HOM05D006333 ORTHO05D007799 8.9e-45 185.3 120 75.0
TPR.G9857 Trifolium pratense HOM05D006333 ORTHO05D007799 1.2e-44 184.9 313 39.0
CARHR017920 Cardamine hirsuta HOM05D006333 ORTHO05D007799 2.0e-44 184.1 309 38.8
AT1G17330 Arabidopsis thaliana HOM05D006333 ORTHO05D007799 2.6e-44 183.7 309 38.8
arahy.Tifrunner.gnm1.ann1.N7V6FU Arachis hypogaea HOM05D006333 ORTHO05D007799 2.6e-44 183.7 120 75.0
MD13G1004800 Malus domestica HOM05D006333 ORTHO05D007799 3.4e-44 183.3 307 41.0
SGA_v2.0_scaffold173G39125 Striga asiatica HOM05D006333 ORTHO05D007799 3.4e-44 183.3 168 57.7
PGR044G2499 Punica granatum HOM05D006333 ORTHO05D007799 4.4e-44 183.0 157 61.1
unitig_32.g11605 Utricularia gibba HOM05D006333 ORTHO05D007799 4.4e-44 183.0 137 67.2
CDE02G3779 Ceratophyllum demersum HOM05D006333 ORTHO05D007799 5.8e-44 182.6 121 75.2
Thhalv10008690m.g Eutrema salsugineum HOM05D006333 ORTHO05D007799 5.8e-44 182.6 313 38.3
AL1G29580 Arabidopsis lyrata HOM05D006333 ORTHO05D007799 7.5e-44 182.2 309 38.5
AUR62017701 Chenopodium quinoa HOM05D006333 ORTHO05D007799 7.5e-44 182.2 116 76.7
THA.LOC104808350 Tarenaya hassleriana HOM05D006333 ORTHO05D007799 1.7e-43 181.0 313 38.7
AUR62032988 Chenopodium quinoa HOM05D006333 ORTHO05D007799 8.3e-43 178.7 120 73.3
TAR629G0175 Trochodendron aralioides HOM05D006333 ORTHO05D007799 1.1e-42 178.3 120 75.0
ATR0618G379 Amborella trichopoda HOM05D006333 ORTHO05D007799 1.9e-42 177.6 121 74.4
Sc17g0000100 Simmondsia chinensis HOM05D006333 ORTHO05D007799 1.9e-42 177.6 160 59.4
Sabra07G0060700 Salix brachista HOM05D006333 ORTHO05D007799 2.4e-42 177.2 141 65.2
MBI06_g42293_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 5.4e-42 176.0 121 73.6
Migut.A00709 Erythranthe guttata HOM05D006333 ORTHO05D007799 1.2e-41 174.9 160 58.1
FAN17G3063 Fragaria x ananassa HOM05D006333 ORTHO05D007799 2.7e-41 173.7 189 55.0
Eucgr.J00870 Eucalyptus grandis HOM05D006333 ORTHO05D007799 1.0e-40 171.8 120 70.8
BcaC05g25649 Brassica carinata HOM05D006333 ORTHO05D007799 1.3e-40 171.4 313 37.1
C05p15710 Brassica napus HOM05D006333 ORTHO05D007799 1.3e-40 171.4 313 37.1
BolC5t30276H Brassica oleracea HOM05D006333 ORTHO05D007799 1.3e-40 171.4 313 37.1
Sp1g15450 Schrenkiella parvula HOM05D006333 ORTHO05D007799 1.3e-40 171.4 313 37.7
Os10g0486000 Oryza sativa ssp. japonica HOM05D006333 ORTHO05D007799 2.3e-40 170.6 121 69.4
Cfa008751 Carpinus fangiana HOM05D006333 ORTHO05D007799 1.5e-39 167.9 313 38.7
Zm00001eb045350 Zea mays HOM05D006333 ORTHO05D007799 1.5e-39 167.9 121 66.9
Atru.chr11.2675 Acer truncatum HOM05D006333 ORTHO05D007799 3.3e-39 166.8 201 50.2
Carub.0001s1708 Capsella rubella HOM05D006333 ORTHO05D007799 5.6e-39 166.0 309 36.6
Atru.chr11.2676 Acer truncatum HOM05D006333 ORTHO05D007799 1.2e-38 164.9 201 50.2
HPP92_008575 Vanilla planifolia HOM05D006333 ORTHO05D007799 1.2e-38 164.9 142 62.0
BraA06t24479Z Brassica rapa HOM05D006333 ORTHO05D007799 2.8e-38 163.7 313 36.1
A06p13260 Brassica napus HOM05D006333 ORTHO05D007799 3.6e-38 163.3 313 36.1
BcaB07g34033 Brassica carinata HOM05D006333 ORTHO05D007799 4.7e-38 162.9 120 66.7
Cc11_g02420 Coffea canephora HOM05D006333 ORTHO05D007799 1.1e-37 161.8 313 38.3
SGA_v2.0_scaffold146G36264 Striga asiatica HOM05D006333 ORTHO05D007799 4.0e-37 159.8 160 57.5
ClCG10G012010 Citrullus lanatus HOM05D006333 ORTHO05D007799 5.2e-37 159.5 103 75.7
SalBow7G0482 Salvia bowleyana HOM05D006333 ORTHO05D007799 1.2e-36 158.3 125 65.6
DCAR_008496 Daucus carota HOM05D003141 ORTHO05D003633 2.4e-34 150.6 286 38.5
Ah.01g001500 Amaranthus hybridus HOM05D006333 ORTHO05D007799 1.0e-32 145.2 284 35.9
QL03p044200 Quercus lobata HOM05D006333 ORTHO05D007799 2.3e-32 144.1 85 81.2
Mapoly0006s0058 Marchantia polymorpha HOM05D006333 ORTHO05D007799 5.1e-32 142.9 115 60.9
Pp3c7_23360 Physcomitrium patens HOM05D006333 ORTHO05D007799 5.1e-32 142.9 140 55.0
SalBow1G5083 Salvia bowleyana HOM05D006333 ORTHO05D007799 6.6e-32 142.5 104 69.2
SMO116G0442 Selaginella moellendorffii HOM05D006333 ORTHO05D007799 1.9e-31 141.0 118 64.4
Actinidia11766 Actinidia chinensis HOM05D006333 ORTHO05D007799 2.5e-31 140.6 122 62.3
Cre05.g234647 Chlamydomonas reinhardtii HOM05D006333 ORTHO05D007799 4.3e-31 139.8 125 57.6
CBR_g5629 Chara braunii HOM05D006333 ORTHO05D007799 3.4e-28 130.2 105 61.0
Ah.05g173900 Amaranthus hybridus HOM05D006333 ORTHO05D007799 2.4e-26 124.0 84 69.0
MCO07G572 Micromonas commoda HOM05D006333 ORTHO05D007799 1.3e-24 118.2 121 51.2
Haze_11767 Corylus avellana HOM05D006333 ORTHO05D007799 2.1e-22 110.9 78 73.1
PRCOL_00000482 Prasinoderma coloniale HOM05D006333 ORTHO05D007799 9.0e-21 105.5 159 42.8
Thecc.08G107200 Theobroma cacao HOM05D006333 ORTHO05D007799 4.2e-18 96.7 80 60.0
Haze_06289 Corylus avellana HOM05D006333 ORTHO05D007799 7.8e-17 92.4 51 86.3
Actinidia13050 Actinidia chinensis HOM05D006333 ORTHO05D007799 3.0e-16 90.5 122 47.5
Haze_18642 Corylus avellana HOM05D006333 ORTHO05D007799 3.9e-16 90.1 71 67.6
Cfa023716 Carpinus fangiana HOM05D006333 ORTHO05D007799 4.6e-09 66.6 98 40.8


User provided reference genes

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