Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16024 Vaccinium macrocarpon HOM05D005310 ORTHO05D006920 5.7e-175 617.5 309 100.0
Rhsim02G0147000 Rhododendron simsii HOM05D005310 ORTHO05D006920 6.7e-67 258.5 162 79.0
Actinidia07651 Actinidia chinensis HOM05D005310 ORTHO05D006920 3.6e-60 236.1 162 73.5
CSS0016268 Camellia sinensis var. sinensis HOM05D005310 ORTHO05D006920 6.3e-57 225.3 163 69.3
Dinv32338 Davidia involucrata HOM05D005310 ORTHO05D006920 7.7e-55 218.4 193 58.0
CiPaw.09G137200 Carya illinoinensis HOM05D005310 ORTHO05D006920 7.2e-53 211.8 158 65.2
Lj1A1175T55 Lonicera japonica HOM05D005310 ORTHO05D006920 2.1e-52 210.3 186 61.8
Dinv12753 Davidia involucrata HOM05D005310 ORTHO05D006920 2.7e-52 209.9 159 66.0
Haze_05380 Corylus avellana HOM05D005310 ORTHO05D006920 3.4e-50 203.0 157 62.4
Sabra04G0040500 Salix brachista HOM05D005310 ORTHO05D006920 1.3e-49 201.1 166 62.0
GSVIVG01021256001 Vitis vinifera HOM05D005310 ORTHO05D006920 2.2e-49 200.3 158 63.3
Potri.004G061200 Populus trichocarpa HOM05D005310 ORTHO05D006920 8.3e-49 198.4 166 60.2
QL05p049965 Quercus lobata HOM05D005310 ORTHO05D006920 7.0e-48 195.3 158 62.0
Prupe.4G066900 Prunus persica HOM05D005310 ORTHO05D006920 4.5e-47 192.6 155 62.6
Nitab4.5_0005937g0010 Nicotiana tabacum HOM05D005310 ORTHO05D006920 1.2e-44 184.5 159 61.6
Cc02_g15590 Coffea canephora HOM05D005310 ORTHO05D006920 4.7e-44 182.6 183 56.8
Nn3g21104 Nelumbo nucifera HOM05D005310 ORTHO05D006920 1.0e-43 181.4 182 54.4
MD00G1009300 Malus domestica HOM05D005310 ORTHO05D006920 1.4e-43 181.0 155 60.6
TWI53G0456 Tripterygium wilfordii HOM05D005310 ORTHO05D006920 1.8e-43 180.6 200 52.5
DCAR_027984 Daucus carota HOM05D005310 ORTHO05D006920 2.3e-43 180.3 187 53.5
Lj4g0024191 Lotus japonicus HOM05D005310 ORTHO05D006920 3.0e-43 179.9 132 68.9
Nitab4.5_0000437g0070 Nicotiana tabacum HOM05D005310 ORTHO05D006920 3.0e-43 179.9 159 59.1
Duzib192G0594 Durio zibethinus HOM05D005310 ORTHO05D006920 4.0e-43 179.5 185 52.4
Atru.chr10.1571 Acer truncatum HOM05D005310 ORTHO05D006920 5.2e-43 179.1 162 58.6
Eucgr.E02785 Eucalyptus grandis HOM05D005310 ORTHO05D006920 2.6e-42 176.8 185 54.1
RcHm_v2.0_Chr5g0011651 Rosa chinensis HOM05D005310 ORTHO05D006920 3.4e-42 176.4 155 59.4
Manes.16G042900 Manihot esculenta HOM05D005310 ORTHO05D006920 7.5e-42 175.3 158 58.2
Hma1.2p1_2416F.1_g321730 Hydrangea macrophylla HOM05D005310 ORTHO05D006920 1.3e-41 174.5 137 65.0
Thhalv10024714m.g Eutrema salsugineum HOM05D005310 ORTHO05D006920 4.9e-41 172.6 164 54.3
AT4G18810 Arabidopsis thaliana HOM05D005310 ORTHO05D006920 1.1e-40 171.4 184 48.9
AL7G35440 Arabidopsis lyrata HOM05D005310 ORTHO05D006920 1.4e-40 171.0 184 50.0
CAN.G411.52 Capsicum annuum HOM05D005310 ORTHO05D006920 1.8e-40 170.6 156 57.1
Migut.M01009 Erythranthe guttata HOM05D005310 ORTHO05D006920 1.8e-40 170.6 138 63.8
Gohir.D06G138800 Gossypium hirsutum HOM05D005310 ORTHO05D006920 2.4e-40 170.2 185 51.4
Gorai.010G161400 Gossypium raimondii HOM05D005310 ORTHO05D006920 2.4e-40 170.2 185 51.4
Lalb_Chr12g0204951 Lupinus albus HOM05D005310 ORTHO05D006920 2.4e-40 170.2 146 60.3
Sp7g17520 Schrenkiella parvula HOM05D005310 ORTHO05D006920 2.4e-40 170.2 185 50.3
PGSC0003DMG400028420 Solanum tuberosum HOM05D005310 ORTHO05D006920 2.4e-40 170.2 157 59.2
Thecc.06G165700 Theobroma cacao HOM05D005310 ORTHO05D006920 4.1e-40 169.5 185 50.8
FAN11G0629 Fragaria x ananassa HOM05D005310 ORTHO05D006920 5.4e-40 169.1 176 51.7
FAN16G3592 Fragaria x ananassa HOM05D005310 ORTHO05D006920 5.4e-40 169.1 182 52.7
PSO210G5690 Papaver somniferum HOM05D005310 ORTHO05D006920 5.4e-40 169.1 163 55.2
C01p12850 Brassica napus HOM05D005310 ORTHO05D006920 7.0e-40 168.7 186 50.5
THA.LOC104806167 Tarenaya hassleriana HOM05D005310 ORTHO05D006920 1.2e-39 167.9 158 55.7
BolC1t01261H Brassica oleracea HOM05D005310 ORTHO05D006920 1.6e-39 167.5 186 50.5
Glyma.05G161000 Glycine max HOM05D005310 ORTHO05D006920 2.0e-39 167.2 156 57.7
Psat7g068720 Pisum sativum HOM05D005310 ORTHO05D006920 2.0e-39 167.2 156 57.1
FvH4_3g07310 Fragaria vesca HOM05D005310 ORTHO05D006920 3.5e-39 166.4 154 57.1
FAN25G3188 Fragaria x ananassa HOM05D005310 ORTHO05D006920 1.7e-38 164.1 154 56.5
Phvul.002G241100 Phaseolus vulgaris HOM05D005310 ORTHO05D006920 1.7e-38 164.1 156 57.7
BraA01t01031Z Brassica rapa HOM05D005310 ORTHO05D006920 3.0e-38 163.3 187 50.8
Glyma.08G118400 Glycine max HOM05D005310 ORTHO05D006920 3.9e-38 162.9 156 56.4
SGA_v2.0_scaffold16G07714 Striga asiatica HOM05D005310 ORTHO05D006920 3.9e-38 162.9 142 62.7
VMungo0251G0247 Vigna mungo HOM05D005310 ORTHO05D006920 3.9e-38 162.9 156 57.1
FAN21G2773 Fragaria x ananassa HOM05D005310 ORTHO05D006920 5.0e-38 162.5 154 56.5
A01p10840 Brassica napus HOM05D005310 ORTHO05D006920 1.5e-37 161.0 187 49.2
Medtr8g087310 Medicago truncatula HOM05D005310 ORTHO05D006920 1.9e-37 160.6 149 57.0
AUR62041821 Chenopodium quinoa HOM05D005310 ORTHO05D006920 2.5e-37 160.2 155 56.1
PGR042G1369 Punica granatum HOM05D005310 ORTHO05D006920 7.3e-37 158.7 162 54.3
Ca_17897_v3 Cicer arietinum L. HOM05D005310 ORTHO05D006920 1.2e-36 157.9 151 58.3
EL10Ac8g20559 Beta vulgaris HOM05D005310 ORTHO05D006920 1.6e-36 157.5 181 49.7
TPR.G6733 Trifolium pratense HOM05D005310 ORTHO05D006920 1.6e-36 157.5 179 53.6
AUR62039478 Chenopodium quinoa HOM05D005310 ORTHO05D006920 3.6e-36 156.4 155 54.2
ATR0012G016 Amborella trichopoda HOM05D005310 ORTHO05D006920 4.7e-36 156.0 160 51.9
COL.COLO4_31237 Corchorus olitorius HOM05D005310 ORTHO05D006920 4.7e-36 156.0 154 55.8
ECA248G0338 Erigeron canadensis HOM05D005310 ORTHO05D006920 4.7e-36 156.0 174 50.0
MD05G1295400 Malus domestica HOM05D005310 ORTHO05D006920 4.7e-36 156.0 151 56.3
Aqoxy1G01994 Aquilegia oxysepala HOM05D005310 ORTHO05D006920 6.2e-36 155.6 149 55.0
Lsat_1_v5_gn_1_110100 Lactuca sativa HOM05D005310 ORTHO05D006920 6.2e-36 155.6 163 54.6
Ciclev10018335m.g Citrus clementina HOM05D005310 ORTHO05D006920 1.8e-35 154.1 169 55.6
Sc05g0006870 Simmondsia chinensis HOM05D005310 ORTHO05D006920 1.8e-35 154.1 190 49.5
HanXRQChr11g0343901 Helianthus annuus HOM05D005310 ORTHO05D006920 2.3e-35 153.7 165 55.8
Aa31LG6G1520 Aethionema arabicum HOM05D005310 ORTHO05D006920 4.0e-35 152.9 164 50.0
Ah.14g086990 Amaranthus hybridus HOM05D005310 ORTHO05D006920 1.5e-34 151.0 155 52.3
CARHR225670 Cardamine hirsuta HOM05D005310 ORTHO05D006920 2.6e-34 150.2 143 53.1
Carub.0007s2242 Capsella rubella HOM05D005310 ORTHO05D006920 3.4e-34 149.8 184 46.7
Sed0028201 Sechium edule HOM05D005310 ORTHO05D006920 3.4e-34 149.8 190 46.8
unitig_0.g743 Utricularia gibba HOM05D005310 ORTHO05D006920 4.4e-34 149.4 136 56.6
ClCG03G007450 Citrullus lanatus HOM05D005310 ORTHO05D006920 2.9e-33 146.7 145 52.4
CsaV3_1G033090 Cucumis sativus L. HOM05D005310 ORTHO05D006920 1.9e-32 144.1 145 51.7
MELO3C002677.2 Cucumis melo HOM05D005310 ORTHO05D006920 4.1e-32 142.9 165 49.1
Os02g0234500 Oryza sativa ssp. japonica HOM05D005310 ORTHO05D006920 3.5e-31 139.8 135 52.6
Actinidia02744 Actinidia chinensis HOM05D005310 ORTHO05D006920 1.5e-29 134.4 141 58.2
Haze_05379 Corylus avellana HOM05D005310 ORTHO05D006920 2.5e-29 133.7 119 62.2
CDE04G2110 Ceratophyllum demersum HOM05D005310 ORTHO05D006920 2.1e-28 130.6 135 51.9
Zm00001eb204900 Zea mays HOM05D005310 ORTHO05D006920 8.1e-28 128.6 130 50.8
SEGI_40960 Sequoiadendron giganteum HOM05D005310 ORTHO05D006920 1.1e-27 128.3 200 42.5
HPP92_004012 Vanilla planifolia HOM05D005310 ORTHO05D006920 1.1e-27 128.3 153 47.7
HPP92_004025 Vanilla planifolia HOM05D005310 ORTHO05D006920 2.3e-27 127.1 153 47.7
Hund04397 Selenicereus undatus HOM05D005310 ORTHO05D006920 2.2e-25 120.6 191 42.9
AagrBONN_evm.TU.Sc2ySwM_362.2005 Anthoceros agrestis HOM05D005310 ORTHO05D006920 1.1e-24 118.2 113 50.4
Pp3c26_9450 Physcomitrium patens HOM05D005310 ORTHO05D006920 5.1e-22 109.4 118 49.2
Mapoly0037s0097 Marchantia polymorpha HOM05D005310 ORTHO05D006920 1.2e-20 104.8 164 38.4
arahy.Tifrunner.gnm1.ann1.W2RHW2 Arachis hypogaea HOM05D005310 ORTHO05D006920 2.3e-19 100.5 176 42.0
Peaxi162Scf00202g01112 Petunia axillaris HOM05D005310 ORTHO05D006920 4.6e-15 86.3 54 77.8
CBR_g48496 Chara braunii HOM05D005310 ORTHO05D006920 1.0e-14 85.1 106 40.6
Solyc02g072160.4 Solanum lycopersicum HOM05D005310 ORTHO05D006920 3.0e-14 83.6 55 76.4
Sopen02g021140 Solanum pennellii HOM05D005310 ORTHO05D006920 8.6e-14 82.0 55 74.5
Cpa.g.sc7.109 Carica papaya HOM05D005310 ORTHO05D006920 1.1e-13 81.6 52 78.8
TAR627G0081 Trochodendron aralioides HOM05D005310 ORTHO05D006920 1.5e-13 81.3 79 58.2
Haze_05354 Corylus avellana HOM05D005310 ORTHO05D006920 1.9e-13 80.9 57 70.2
Atru.chr10.1570 Acer truncatum HOM05D005310 ORTHO05D006920 2.5e-13 80.5 92 51.1
SalBow8G4237 Salvia bowleyana HOM05D005310 ORTHO05D006920 7.3e-13 79.0 52 75.0
Cre05.g244800 Chlamydomonas reinhardtii HOM05D005310 ORTHO05D006920 1.1e-11 75.1 106 43.4
SMO119G0157 Selaginella moellendorffii HOM05D005310 ORTHO05D006920 4.0e-11 73.2 82 50.0
PRCOL_00002435 Prasinoderma coloniale HOM05D005310 ORTHO05D006920 1.5e-10 71.2 98 41.8
Gohir.A06G133700 Gossypium hirsutum HOM05D005310 ORTHO05D006920 5.8e-10 69.3 79 51.9


User provided reference genes

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